Muribaculum gordoncarteri: E7746_06420
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Entry
E7746_06420 CDS
T10108
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mgod Muribaculum gordoncarteri
Pathway
mgod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7746_06420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgod03021
]
E7746_06420
03019 Messenger RNA biogenesis [BR:
mgod03019
]
E7746_06420
Transcription machinery [BR:
mgod03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E7746_06420
Messenger RNA biogenesis [BR:
mgod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E7746_06420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
Mor
Spore_III_AA
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QCD35552
UniProt:
A0A4P7VHY0
LinkDB
All DBs
Position
complement(1459293..1461353)
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AA seq
686 aa
AA seq
DB search
MYNIADLNAMTESELKGIAESMGMKKVDALSQEDLVYKILDQQAEDIVAASAVEKKKKAS
KEPKTPKNNEPKKKKKQPAQQPVAELSAPVAQDLTADGAETVQSQPLAEPPRRRRGRPSK
EQLAAEAAALQNQPKDQDATDEKVEPVVEPERELPPHVEVVDDNDHRDIMTLVAPLPATE
VTVSGEEPSATDEPKAVEEQAQEQELPVDENQPVAPQQGKKRDFRPGKDCSFGSFFRTER
KFVPRSQREKEEAAAAAAIAAATAPIVIREPGQEPAPQPNNNQGGKKNKRNRNNNNNNNN
QPQPVQEPPMPQYNFDGILMATGVLEVMPDGYGFLRSSDYNYLSSPDDVYVTQAQIKLYG
LKTGDVVDGWIRPPKEGEKYFPLSSVQSVNGRSPEFIRDRVPFEHLTPLFPDEKFDLTGG
RTCNLSTRVVDMFSPIGKGQRGLIVAPPKTGKTILLKDIANAIAENHPDTYIIILLIDER
PEEVTDMSRSVNAEVIASTFDEPADRHVKIASIVLEKAKRMVECGHDVVILLDSITRLAR
AYNTVSPASGKILSGGVDANALQKPKRFFGAARNIENGGSLTIIATALTETSSKMDEVIF
EEFKGTGNMELQLDRKLSNKRIFPAVDIMASSTRRDDLLLRPETLQRMWILRRYLSDRTS
IEAMEFMRDQMEKTRDNDELLRSMNA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtataatatcgccgatctcaacgcaatgactgagagcgaactcaagggcattgctgaa
tctatgggtatgaagaaggtcgacgcattgtcccaggaagaccttgtgtataagatcctt
gaccaacaggccgaggacattgtcgccgcctcagcagtagagaaaaagaagaaggcatct
aaagagcccaaaactcctaaaaataatgagcctaaaaagaaaaagaagcaaccggcacag
cagcctgtagccgaactgtcggcacctgtagcgcaggatttaaccgccgatggcgctgaa
acagttcagtcacaaccgttggcggaaccgccgcgtcgccgtcgtgggcgcccgtcaaag
gaacagttggcggcagaagcggctgctctacagaatcagcctaaggatcaggatgctacc
gatgagaaggttgaaccggttgtagagcctgagcgcgaattgcctcctcatgttgaagtt
gtcgatgacaatgatcatcgcgacattatgacgctggttgctccgcttcccgctaccgaa
gttaccgtgtcgggtgaagagccgtcggctaccgacgagcctaaggctgttgaagaacag
gctcaggaacaagaactgcctgttgacgaaaaccaacctgtagctcctcaacaaggcaaa
aaacgcgatttccgtcccggaaaggactgttcattcggctcgttcttccgtaccgagcgt
aaatttgtgccacgttcgcagcgtgagaaggaggaagctgccgcagccgctgcaatagcc
gcagcaacagcccccattgtcattcgtgagcccggacaggaacccgctccgcaacccaat
aataatcagggcggcaagaagaataagcgcaaccgcaataataacaacaataataacaat
cagcctcagccggttcaggaaccgccaatgccgcaatacaactttgacggcatattgatg
gctaccggtgtgcttgaggtgatgcccgacggatacggattccttcgttcaagcgactac
aactacctgtcgtcgcccgatgatgtctatgtcactcaggctcagataaaactttacgga
ttaaagaccggcgatgtcgttgacggatggattcgtccgcctaaggagggcgagaaatat
ttcccgcttagctcggttcagagtgtaaacggtcgctcccccgagtttatacgtgaccgt
gttccatttgaacatctcacgcctcttttccccgacgaaaaatttgacttgaccggtggt
cgcacctgcaatctgtcgactcgtgtcgtagatatgttctcgcccataggcaaaggccag
cgtggcttgattgtggctcctcccaagaccggtaagaccatattgctgaaggatatagcc
aatgcaatcgctgaaaatcaccccgatacatatatcataatattgcttatcgacgagcgt
cccgaggaggtgaccgacatgagccgtagcgtaaatgccgaggtcattgcttcgacattc
gatgagccggccgaccgacatgtcaaaattgcaagtatcgttcttgagaaggcaaagcgc
atggtagagtgcggacacgatgttgtgatattgctcgactcgataactcgtctggcacgc
gcctataacacggtttcccctgcatcgggcaagattctgtcgggaggtgttgatgccaat
gcgcttcaaaagcccaaacgcttcttcggtgctgcccgtaacattgaaaacggaggttcg
cttacaatcatcgctacggcgttgaccgaaacaagctccaagatggatgaagtgatattt
gaagagttcaagggcaccggcaacatggagcttcagctcgaccgcaagctatcgaacaag
cgaatattcccggctgtcgacattatggcgtcgagcactcgtcgcgacgacctgttgttg
cgtcccgaaacattgcaacgaatgtggattctgcgtcgttacctcagcgaccgcacatcc
attgaggcaatggaattcatgcgcgaccaaatggagaagactcgtgacaacgatgaactc
ctgaggtcgatgaatgcctga
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