Muribaculum gordoncarteri: E7746_13885
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Entry
E7746_13885 CDS
T10108
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mgod Muribaculum gordoncarteri
Pathway
mgod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7746_13885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgod03019
]
E7746_13885
03009 Ribosome biogenesis [BR:
mgod03009
]
E7746_13885
Enzymes [BR:
mgod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E7746_13885
Messenger RNA biogenesis [BR:
mgod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7746_13885
Ribosome biogenesis [BR:
mgod03009
]
Prokaryotic type
rRNA helicases
E7746_13885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QCD36889
UniProt:
A0A4P7VRB8
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All DBs
Position
3191530..3193305
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AA seq
591 aa
AA seq
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MKTFEELGVRDDLRKAIEELGFENPMPVQEKVIPHLLNEDGDVVALAQTGTGKTAAFGLP
VLQRIDISHNVPQALIIAPTRELCLQIGSDLADFSKYIPRLEVLPVYGGSSIESQIRSLK
RGVHVIVATPGRLIDLINRGVVKLDDVHTVILDEADEMLNMGFVDDINDILSHVPENRKM
LLFSATMPQEIAKIAAKYMHNPQEFVIGTKNEGAENVKHVYYMVNARDKYLALKRIADDN
PNIYGIVFCRTRKETQEVADWLIQDGYNADSLHGELSQTQRDVVMKKFRDHVLKLLVATD
VAARGLDVSNLTHVINYGLPDDIATYTHRSGRTGRAGKTGVSIAIIHSRERNKLREIEKR
IGKTFERKEVPTPAHIIEKQLYNLADRLERVKVDDDEIAKYLPGVSRKLGWLSQEDLLKR
VVSLEFNRLLEYYKDAPAIDYIDEKPSKKERKELSKPRTAEEKDRRTADRGMARIYVNAG
KSDGFYAGNLIDILNHSVPGPRIDVGRIDLMPGYSLFDVKKNDARRVVEALNHIDFVGHK
LYAEIADPEKDYSRAATRRKREAASAGSGKQANGNFDKFINKKGRKGSHKK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatttgaagaattgggcgtacgtgacgacttgcgcaaagccatcgaggagctc
ggatttgagaatccaatgccggtgcaggagaaagtgattccccacctgctgaatgaggat
ggcgatgtggttgcgcttgcgcagaccggaacgggaaaaaccgcagctttcggactgccg
gtgctccagcgcatcgacatatcgcacaatgtgccccaggcgctgatcatagctcccaca
cgcgagctgtgcctgcagataggcagtgacctggccgacttttccaaatacatcccccgt
cttgaggtgcttcccgtctacggcggctcaagcatcgagagccagatacgcagccttaag
cgtggagtgcacgtgatagtggctacgccgggccgactcatcgacctcataaaccgtggc
gtggtgaagctcgacgatgtgcacaccgtgattcttgacgaggccgacgagatgctcaac
atgggctttgtcgacgacataaacgacatcctgagccatgtgcccgaaaaccgcaagatg
ctcctcttctcggctacaatgccgcaggagattgctaaaatcgcggccaagtacatgcac
aacccccaggagtttgtgataggcaccaagaacgaaggcgccgagaacgtaaagcatgtc
tactacatggtgaatgcccgcgacaagtatctcgcgcttaagcgtatagccgacgacaat
cccaacatatacggaatcgtattctgccgtacccgcaaggaaacccaggaggtggccgac
tggctgattcaggacggatataacgccgactcgctgcacggtgagttgtcgcagacccag
cgcgatgttgtgatgaagaaattccgagaccacgtgctgaagctccttgttgccaccgat
gttgcggcgcgcggccttgatgtgagcaacctcacccatgtcataaactacggcttgccc
gacgacattgccacctacacccatcgctcgggccgtacgggccgagccggcaaaacgggt
gtgtcaatcgccattatccactctcgcgagcgcaacaagttgcgtgagattgagaagcgc
atcggaaagacttttgagcgcaaggaggtgcccacacctgcccacatcatcgagaagcag
ctttacaatctcgccgacaggcttgagcgcgtgaaggttgacgatgatgaaattgcaaaa
tatctgcccggagtgagccgtaagctcggatggctgtcgcaggaggacttgctgaagcgc
gtcgtttcgctggagttcaaccgtcttcttgaatattacaaggacgctcctgcaattgac
tatatcgatgaaaagccgtcaaagaaggagcgcaaggagttgtcaaagccccgcaccgcc
gaggagaaggatcgccgcacggccgaccgtggcatggcccgaatatatgtcaacgccgga
aagagcgacggattctatgccggaaatctcatcgacatactcaaccattcggtgcccgga
ccgcgcatcgatgtgggacgaatcgacctgatgcccggttactcgctgtttgatgtcaag
aagaacgatgcccgcagggtggtcgaggctttgaaccacatcgactttgtgggtcataag
ctctatgccgagattgccgatcccgaaaaggactattcgcgtgcagccactcgtcgcaag
cgtgaggcggcatcggcaggctcgggcaagcaggccaacggcaactttgacaagttcata
aataagaaggggcgaaaaggctcacacaagaaataa
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