Mycobacterium vicinigordonae: H0P51_05435
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Entry
H0P51_05435 CDS
T06936
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mgor
Mycobacterium vicinigordonae
Pathway
mgor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H0P51_05435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgor03021
]
H0P51_05435
03400 DNA repair and recombination proteins [BR:
mgor03400
]
H0P51_05435
Enzymes [BR:
mgor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H0P51_05435
Transcription machinery [BR:
mgor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H0P51_05435
DNA repair and recombination proteins [BR:
mgor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H0P51_05435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QLL08392
UniProt:
A0A7D6HVG3
LinkDB
All DBs
Position
1229445..1230488
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEDILTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PSMHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKSSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPPSFDPSEVAGYDVATGTWSTEGAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgccccacactgtccgaggacatcctcaccgacaaccggtctcag
ttcgtcatcgaaccgctcgagcctggattcggttacacccttggcaattccctgcgccgc
acgctgctgtcgtcgattcccggcgcggccgtcaccagcatccgcatcgacggcgtgctg
cacgagttcaccaccgtgcccggggtcaaggaagacgtcaccgacatcatcctcaacctc
aagggcctggtcgtgtcctccgaggaggacgagccggtcaccatgtacctgcgtaagcag
ggacccggtgaggtcaccgcgggcgacattgttccgccggccggtgtcacggtgcacaac
ccctcgatgcacatcgccacgctgaacgacaagggcaagctcgaggtcgagctcgtcgtc
gagcgcggccgtggctacgtcccggcagtgcagaaccgggcctcgggtgccgaaatcggc
cgcatcccagtcgattccatctactcgccggttctcaaggtgacctacaaagtggacgcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagagt
tcgatcacaccccgcgacgcgctggcttcggccggtaaaacgctggtcgaattgttcggt
ctggcacgggaactcaacgtcgaagccgagggcatcgagatcgggccgtcgccggccgag
gcagaccacatcgcctcgttcgcgctgccgatcgacgacctggacctgaccgtgcggtcc
tacaactgcctcaagcgcgagggcgtgcacaccgtcggcgaactggtctcgcgtaccgag
tccgacctgctcgacatccgcaacttcggtcagaagtccatcgacgaggtaaaggttaag
ctgcaccagctgggcctgtcgctcaaggacagcccgcccagcttcgatccgtccgaggtc
gccggctacgacgtcgccaccggcacctggtccaccgagggcgcttacgacgaccaggac
tacgccgaaaccgaacagctgtaa
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