Mycobacterium vicinigordonae: H0P51_11170
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Entry
H0P51_11170 CDS
T06936
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mgor
Mycobacterium vicinigordonae
Brite
KEGG Orthology (KO) [BR:
mgor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mgor03016
]
H0P51_11170
Enzymes [BR:
mgor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
H0P51_11170
Transfer RNA biogenesis [BR:
mgor03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H0P51_11170
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QLL09386
UniProt:
A0A7D6E569
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All DBs
Position
complement(2418100..2419389)
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AA seq
429 aa
AA seq
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MSSSPTEPDPSDSTDPLATPLLHPADGIPALSVTARDIASAAARLNRGHGPFAVDAERAS
GFRYSNRAYLIQIRRSGAGTVLIDPVSHGGDPASVLQPVAEVLGEDEWILHSADQDLPCL
AEVGLRPPALYDTELAGRLAGFERVNLATMVERLLGRGLAKGHGAADWSKRPLPAAWLNY
AALDVELLIELRAAISQVLTQQGKTDWAAQEFEYLRTFEDRAVPVTRRDRWRRTSGIHKV
HDRHALAAVRELWTTRDRLAQRRDIAPRRILPDSAIIDAALTNPNTLDELVALPVFGGRN
QRRSAAMWLSALEAARQNPDPPEVSEASSSPPPPARWSRRKPDAAARLEAARAALSELSE
RVQIPTENLLAPDLVRRLCWEWETLAPGVTDSVTIIEEYLRAGQARPWQRELVVPVLAAT
VGLPATVDD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtctcctacggagccggatccgtcggacagcacggacccgctggccactccg
ctgctgcacccggctgacgggattccggccctttccgtcaccgcccgcgacatcgcatcg
gccgccgctcggctgaaccgcgggcacggcccgttcgccgtggacgccgaacgagcctca
ggtttccggtactccaatcgggcctacctgatccagatccggcgatccggcgccggcacc
gtgctgatcgacccggtcagccatggcggtgatcccgccagcgtgttgcagccggtggcc
gaggtgctgggcgaggacgaatggatcctgcactcggccgatcaggacctgccgtgcctg
gccgaggtcggcctgcgaccgccggcgctatacgacaccgaactcgccggccgcctggcc
ggcttcgaacgggtgaacctggcgaccatggtcgagcggctgctgggccggggactggcg
aaaggccacggcgcggccgactggtccaagcggccgttgcccgccgcgtggctcaactac
gccgccctcgacgtggagctgctgatcgagctgcgcgcggcaatttctcaggtcctcacc
cagcagggcaaaaccgattgggccgcacaggaattcgaatatctgcggaccttcgaggac
cgggcggtcccggtcacccgccgggaccgctggcggcggacgtcgggcattcacaaagtg
cacgatcgccacgccctggccgccgtgcgcgagttgtggacgaccagggatcgtctcgcc
cagcgccgagacatcgcgccgcgccgcatcctgccggattcggccatcatcgacgcggcg
ctcaccaaccccaataccctcgacgaattggtcgcgttgcccgtattcggcgggcgcaac
cagcggcgcagcgccgcgatgtggctctcggcgctggaggctgcgcggcagaacccagac
cccccggaagtcagcgaggcgtccagcagtccgccgccgccggcgcggtggagcagacgc
aaacccgacgcggccgcacgattggaagcggcccgcgcggcgctatcggagttgtcggag
cgggtgcagatacccaccgagaatctgctggcacccgacctggtacgacgactgtgctgg
gagtgggagacgctggcgccgggggtgaccgactcggtaaccatcatcgaggagtatctg
cgcgccggacaggcccggccatggcagcgcgaactggtggttccggtgttggccgcgacg
gtgggcctacctgccactgttgacgattga
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