Mycobacterium vicinigordonae: H0P51_16975
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Entry
H0P51_16975 CDS
T06936
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mgor
Mycobacterium vicinigordonae
Pathway
mgor03030
DNA replication
mgor03430
Mismatch repair
mgor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H0P51_16975
03430 Mismatch repair
H0P51_16975
03440 Homologous recombination
H0P51_16975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgor03032
]
H0P51_16975
03400 DNA repair and recombination proteins [BR:
mgor03400
]
H0P51_16975
Enzymes [BR:
mgor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H0P51_16975
DNA replication proteins [BR:
mgor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H0P51_16975
DNA repair and recombination proteins [BR:
mgor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H0P51_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DUF7508
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QLL05539
UniProt:
A0A7D6INY6
LinkDB
All DBs
Position
3786502..3788418
Genome browser
AA seq
638 aa
AA seq
DB search
MRMPNVTAMGATGATQLSFTGLFDELEPSQQPHEQSLRETTFVVVDLETTGGRAVSNSGA
APDAITEIGAVKVCGGAVLGEFATLVDPGRSIPPQIVQLTGITTAMVCDAPTIDAVLPMF
FEFAGDAVLVAHNAGFDIGFLRAAAERCQLHWPRPKVLCTVRLARRVLSREEAPSVRLAE
LARLFAVTTQPTHRALDDARATVDVLHALIERVGNQGIHTYTDLRSYLPDVTPAQRRKRV
LADGLPHRPGVYLFRGPSGEVLYIGTGVDLRRRVSQYFTGADPRGRMKEMVGLAESVDHV
ECAHSLEAGVRELRLLASHAPPYNRRSRFPHRWWWVALTDEAFPRLSVVRNPRHDRAIGP
FRSRTDAADTAALLARFAGVRTCTRRLARSARHGPACPELEVSPCPAARDVTPQQYAAVA
VRVEALIDGTDNAALAAAADQVSALAERHHYESAARLRDHLCTTVEVLWRGQRLRALTAL
PELIAAAPDGDKGYELVVIRHGQLAAAGVARRGVPPMPVIESIAAGAQTILPSAAPLGGA
LVEETALIARWLTAPGVRIVRVTSENTGWASPLRSAGAWAGWAAAARSAKLAAEQLDSHP
LTEPHPTREQLFGRPAVDRGDGAAQPVFPSRQPFSATG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatgcctaacgtcaccgccatgggtgcgaccggtgcgactcagctcagcttcacc
ggcctcttcgacgaactcgagccatcgcagcagccccacgagcagtcactgcgcgaaacc
accttcgttgtggtcgatctggagaccaccggcgggcgcgccgtctccaatagcggagcc
gccccggacgccatcaccgagatcggtgcggtcaaagtgtgcggcggcgccgtcctgggc
gaattcgccaccctggtcgaccctggacgcagcatcccaccccaaatagtccaactgacc
ggaatcactacggcaatggtctgcgacgcccccaccatcgatgccgtactaccgatgttc
ttcgagttcgccggtgacgcggtgctggtcgcccacaacgcgggcttcgatattggcttc
ctgcgcgccgcggccgaacgttgccagctgcactggccgcgcccgaaggtgctgtgcacc
gtccggcttgcaaggcgggtgctcagccgggaagaagcgcccagcgtgcgactggccgag
ttagcacggctgttcgccgtgacgacgcaaccgacgcaccgcgctctcgacgacgcccgg
gccaccgttgacgtgctgcacgcactgatcgagcgggtgggcaaccagggcattcatacc
tacaccgacctgcggtcctatctgccggacgtcacccccgcccagcgccgcaaacgggtg
ctggccgacggcctgccccaccggccgggtgtctacctgttccgtggtccctcgggcgag
gtgctctatatcggtaccggtgtcgacctgcggcgccgcgtcagccagtacttcaccggc
gccgatccgcgcggccggatgaaagagatggtcggcctcgccgaaagcgtcgaccacgtc
gaatgcgcgcactccctcgaggcgggggttcgggaattgcgactgctggcctcccacgcc
ccgccgtataaccgccggtcgcggtttccgcaccggtggtggtgggtggcgctcaccgac
gaggcgttcccgcgactctcggtggtgcgcaacccgcgtcacgaccgtgccatcggcccg
ttccggtcccgcacggacgccgcggacaccgcggccctgctcgctcgattcgccggcgtg
cgaacctgcaccaggcggctggcccgatcagcgcggcacggaccggcctgtcccgaactc
gaggtgtcaccctgtccggcggcccgggacgtgacgccccagcagtacgcggcggtggcg
gtccgggtcgaagcgctgatcgacggcaccgacaacgccgcgctcgccgcagccgccgac
caggtttcagcactggctgagcgccatcactacgagagcgcggctaggctgcgcgaccac
ctctgcaccacggtcgaggtgttgtggcgcggccagcggctgcgggccctgaccgcgctg
cccgagctgatcgccgcggcgccggacggcgacaaagggtacgaactcgtcgtcatccgc
cacggccaactcgccgccgcgggcgtggcccggcgcggggtaccgccgatgccggtgatc
gagtccatcgccgccggcgcccagacgatcctgccgtctgcggccccgctcggcggggcg
ctggttgaggagaccgcgctgatcgcccgctggctaacggcgccaggggtacggatcgtg
cgtgtcacctccgagaacaccggttgggcgtcaccgctgcggtcggccggcgcgtgggcg
ggctgggcggccgcggcccgttcggcgaaactggccgcggagcagttggattcacacccg
ctgactgaaccgcacccaacgcgcgagcagctgttcggccgccccgctgtcgatcgcggc
gacggcgcggcacaacccgtcttcccaagccggcaaccattcagcgcgactggataa
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