Mycobacterium vicinigordonae: H0P51_23500
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Entry
H0P51_23500 CDS
T06936
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
mgor
Mycobacterium vicinigordonae
Pathway
mgor03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mgor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H0P51_23500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgor03400
]
H0P51_23500
DNA repair and recombination proteins [BR:
mgor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H0P51_23500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
HC2
Motif
Other DBs
NCBI-ProteinID:
QLL06650
UniProt:
A0A7D6DYF1
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All DBs
Position
5278520..5279431
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AA seq
303 aa
AA seq
DB search
MRSIWKGSIAFGLVNVPVKVYSATGDHDIKFHQVHDKDNGRIRYKRVCEVCGEVVEYNHI
ARAFESDDGKSVVITDDDIATLPEERSREIEVLEFVPASEVDPMLFDRSYFLEPDSKSSK
SYVLLAKTLAETDRMAIVHFTLRSKTRLAALRVKDFGKRDVMVIHTLLWPDEIRDPDFPV
LDKEVEIKPAELKMAGQVVESMSDDFDPDRYHDTYQEQLQELVEAKLEGGEAFTVEEQPT
ELDESEDVSDLLAKLEASVKARSGGAAEAPKKSAAKKAPAKRAPAKKAPAKNAAAKKAIA
KKS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccatttggaagggctcgatcgctttcggcctggtaaacgttccggtcaaggtg
tatagcgccaccggggaccacgacatcaaattccatcaggtgcatgacaaggacaacgga
cgcatccgctacaagcgagtctgtgaggtgtgcggagaggtcgtcgaatacaaccacatc
gcccgcgcatttgagtccgacgacggcaagagtgtggtgatcaccgacgacgacatcgcc
accctgcccgaagagcgcagccgcgagatcgaagtgctggagttcgtcccggccagcgag
gtggacccgatgctgttcgaccgcagctacttcctggagcccgattcgaaatcctcgaaa
tcgtatgtgctgctagccaagacgctcgctgaaaccgatcggatggcgatcgtgcacttc
acgctgcgcagcaagacgcggctggccgcgttgcgcgtcaaggacttcggcaagcgcgac
gtgatggtgatccacacgttgttgtggccggacgagatccgcgaccccgactttccggtg
ctggacaaggaagtggagatcaagccggccgaactgaagatggccggccaagtggtggag
tcgatgtccgacgacttcgacccggaccgctatcacgacacctatcaggaacagttgcaa
gagctggtcgaggcgaaactcgaaggtggcgaggcatttacggtcgaggagcagccgacg
gagttggacgagtcggaagacgtgtccgacctgctggccaagctggaggccagcgtgaaa
gcacgatcgggtggcgcagcggaagcgccgaagaagagcgccgcgaagaaggcgccggcc
aagagagcccccgccaagaaggcaccggcgaaaaacgcagctgccaagaaggcaatagcg
aaaaaatcctga
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