Mucilaginibacter gossypii: DIU38_013420
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Entry
DIU38_013420 CDS
T06453
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mgos
Mucilaginibacter gossypii
Pathway
mgos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DIU38_013420 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgos03019
]
DIU38_013420 (pnp)
03016 Transfer RNA biogenesis [BR:
mgos03016
]
DIU38_013420 (pnp)
Enzymes [BR:
mgos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DIU38_013420 (pnp)
Messenger RNA biogenesis [BR:
mgos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DIU38_013420 (pnp)
Transfer RNA biogenesis [BR:
mgos03016
]
Prokaryotic type
tRNA degradation factors
DIU38_013420 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QEM17032
LinkDB
All DBs
Position
complement(3140442..3142574)
Genome browser
AA seq
710 aa
AA seq
DB search
MSLNVIKKVIDLGDGRTIEIETGKLAKQADGSVVIKMGDTMLLATVVSSPEAKEGVDFLP
LSVDYQEKYAATGRIPGGFLRREARLSDYEVLISRLVDRALRPLFPEDYHADTQVMISLI
SADKDIMPDALAGLAASAALSVSDIPFNGPISEVRVAKIDGQLVINPTLSQLENATLEFI
VAGSEHDINMVEGESKEIQEAELVEAIKFAHTAIKLQCLAQKELTIEVGKTEKRVYSHEH
SNEDLKKAIYAATYDQVYSIASAASAKEERSAKFKEVRDAYIETLGEIDDITKSLAKKYY
HDVEYDAIRNLVLDEGKRLDGRTTTQIRPIWSEVGYLPSAHGSAIFTRGETQSLTTVTLG
AKDDEQMIDGAFINGYQKFLLHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKQVLPS
EDENPYTIRVVSDILESNGSSSMATVCAGTLALMDAGVKIKEPVSGIAMGLITNEMGTKY
AILSDILGDEDHLGDMDFKVTGTKNGIVAVQMDLKINGLSYEVLTNALNQAKDGRLHILG
EMAKTITEARADYKPHAPRIVTIKIDKEFIGAVIGPGGKIIQEMQRETGATISIEEKDNQ
GIVQVFADNKASIDAALGRIRAIASKPEVGEIYEGKVKSIMPFGAFVEIMPGKDGLLHIS
EIDHRRIETMDGIFQIGDEVRVKLLDVDKQGKLKLSRKVLLPKPEPKQNN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaacgtaattaaaaaagttattgatctgggcgacggacgcaccattgagatc
gaaacaggtaaactggccaaacaagcggatggttcggtagtgataaaaatgggtgacacc
atgttattggctactgttgtatcgtcgcctgaagctaaagaaggagttgacttcttgcct
ttatctgttgactaccaggaaaaatacgctgcaacaggccgtatcccgggtggtttttta
cgccgcgaggcccgtttatcagactatgaggttttgatctcccgtttggttgaccgtgct
ttacgtcctttattccctgaagattatcacgctgatacacaagtgatgatctccttgata
tctgccgataaagatattatgcccgatgcgttggccggtttggcagcatctgcagcttta
tctgtatctgatataccttttaacggtccaatctctgaggtacgtgttgctaaaattgac
gggcagttagtaattaaccctactttaagccagcttgaaaatgcaactttagaatttatt
gttgcaggcagcgagcacgatatcaacatggttgaaggcgaatcaaaagaaattcaggaa
gctgaattggttgaagccatcaagtttgcccacactgctatcaaactgcaatgtttagct
caaaaagaactgaccattgaagttggtaaaaccgaaaaacgtgtttacagccatgagcat
agcaatgaggacttgaaaaaagctatctacgctgctacttatgatcaggtttactccatt
gcttctgctgcatctgcaaaagaagagcggagtgctaagtttaaagaagtgcgtgacgcc
tatatcgaaaccttaggtgagatagatgatattactaaaagccttgctaaaaaatattac
catgatgtagaatacgatgctatccgtaaccttgtattagacgaaggcaaacgtttagac
ggccgtactactacccagatccgcccgatatggagcgaagtaggttatttgccatcggct
cacggttcggcgatatttacccgcggcgaaacacaatcattaactaccgttaccttaggt
gctaaggatgacgagcaaatgattgatggtgcgttcattaacggttaccaaaaattcctg
ttacactacaatttccctggtttttcaaccggcgaagttaggcctaacaggggtgccggc
cgccgtgaaattggccacggtaacctggctatgcgttcattgaaacaggtattgccatcc
gaagatgaaaacccatacactatccgtgtagtttctgatattttggaatcaaacggttct
tcttcaatggctacagtttgtgctggtacactggcgcttatggatgctggtgttaaaatt
aaagagcctgtatcaggtatcgcgatgggtttgatcaccaacgaaatgggtaccaaatac
gctatcctttctgatatccttggtgatgaagaccacttaggtgatatggactttaaagta
accggtactaaaaacggtatcgttgctgtacagatggacttgaagatcaacggcctttca
tacgaagtattaaccaacgcgttaaaccaggctaaagatggccgtttacatatccttggc
gaaatggctaaaaccattaccgaggcacgtgccgactacaaaccacatgctccgcgtatc
gttaccattaaaattgataaagaatttattggtgcagttatcgggcccggtggtaagatc
atccaggaaatgcaacgtgaaacaggcgctaccatctctatcgaggaaaaagacaaccag
ggtatcgttcaggtatttgccgataacaaggcttctatcgacgcagcgttgggccgcatc
cgcgccatcgcttcaaaaccagaagttggtgaaatttacgaaggtaaagtaaaatcaatt
atgcctttcggtgcgtttgttgaaattatgccaggtaaagatgggttgctgcacatatct
gaaattgatcaccgccgtattgaaacgatggatggcatcttccagataggcgacgaagta
agggttaaactgcttgacgtagataagcaaggtaaactgaagctatcgcgcaaggttctg
ttacctaagcctgaaccaaagcaaaataattaa
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