Mucilaginibacter gossypii: DIU38_013530
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Entry
DIU38_013530 CDS
T06453
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mgos
Mucilaginibacter gossypii
Pathway
mgos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DIU38_013530 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgos03400
]
DIU38_013530 (xth)
Enzymes [BR:
mgos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DIU38_013530 (xth)
DNA repair and recombination proteins [BR:
mgos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DIU38_013530 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QEM17053
LinkDB
All DBs
Position
complement(3171499..3172278)
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AA seq
259 aa
AA seq
DB search
MKIATYNVNGVNGRLPVLLRWLKETSPDVVCLQELKAPQENFPEQAILDAGYRAIWHGQK
SWNGVAILAKDREITEVCRALPGDPEDEHSRYIEALVDGITIGCLYLPNGNPAPGPKFDY
KLGWFERLKIHAAGLLAADKPVVLTGDYNVMPTELDVYKPERWVNDALFRPETREAFKTL
VQQGWTDAIRKIYPTEVIYTFFDYFRDAYGRNAGLRIDHFLLSPHLEKRLLAAGVNRDVR
GWEKTSDHAPVWIELKDDE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctacgtataacgtaaatggtgtaaatgggcgcctgcctgttttgctccgc
tggttaaaggaaacatcccctgacgttgtctgcttgcaggaacttaaagctccacaggaa
aattttccggagcaggctatacttgacgcaggttatagagccatctggcatggccaaaaa
agctggaacggcgttgcaatactggcaaaagacagggaaattacagaggtatgccgcgca
cttcccggcgatcctgaagatgagcatagccgttatattgaagcacttgttgatggtatt
accattggctgcctgtacctgcctaacggcaatcctgcacccggacccaagttcgattat
aaattaggttggtttgaacgccttaaaatccatgcagccggtttacttgctgctgataaa
ccggttgtattaaccggcgattataacgttatgcctaccgagctcgacgtttataaaccg
gagcgctgggtaaatgacgcgctctttcgccctgaaacacgcgaagcctttaaaacactg
gtgcaacagggctggacggatgctatccgcaaaatttatcctaccgaagtgatttatacc
tttttcgattattttcgcgatgcctacggccgtaacgccggtttacggatcgatcatttt
ttactgagccctcacctggaaaaacgtcttttagctgcaggtgtaaaccgggatgtacga
ggctgggaaaaaacaagcgatcacgcaccggtttggattgaactgaaggatgatgaatga
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