Mucilaginibacter gossypii: DIU38_032530
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Entry
DIU38_032530 CDS
T06453
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mgos
Mucilaginibacter gossypii
Pathway
mgos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DIU38_032530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgos03019
]
DIU38_032530
Enzymes [BR:
mgos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DIU38_032530
Messenger RNA biogenesis [BR:
mgos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DIU38_032530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
AAA_19
Utp25_C
Shikimate_DH
Cas3-like_C_2
ERCC3_RAD25_C
UvrD-helicase
DsrH
Motif
Other DBs
NCBI-ProteinID:
QEM20525
LinkDB
All DBs
Position
complement(7491574..7492938)
Genome browser
AA seq
454 aa
AA seq
DB search
MSFENLNLIEPILKALKTEGYTTPTPIQAQAIPIILQHRDLLGCAQTGTGKTAAFAIPTL
QLLHQDRIAHKEQKTIKALVLTPTRELALQIGESFTNYGKHTGLKNLVIFGGVSQNPQVD
ALRRGVDILVATPGRLLDLMNQRYVHLEHVKFLILDEADRMLDMGFVNDVKKIIAKVPAK
RQTLFFSATMPKEIQSLADSILNNPEKVEVTPVSSTADTIQQAVYYVDKGNKKSLLIHIL
KDKSIKTVLVFTRTKHGADKVVKDLNRVGITAEAIHGNKSQNARQRALTNFKNRTTRVLI
ATDIAARGIDIDDLTHVINYELPNVPETYVHRIGRTGRAGANGIAFSFCDAEELEFLKDI
HKLIAKQIPIEEGHPYPLSPAAMAAKINEAPKKGGSGGGQRGGGGGRGGHRRSGGGGNNR
PGGNGRSGGNKRSGGSRSEAGRGGASGMSGAKRG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgaaaatttaaatttaattgagcccatcctcaaggctttaaaaacagaggga
tataccacacctactccaatacaggcacaagccattcctatcatattacaacaccgggac
ttattgggctgtgctcaaaccggtacaggcaaaacagcggcctttgctatccccaccctg
caattattacaccaggacaggatagcccacaaagagcaaaaaaccattaaagcattggtt
ttaaccccaacccgcgagcttgcccttcaaattggcgaaagttttaccaattatggcaaa
cataccggccttaaaaacctggttatatttggtggcgtatcacaaaacccacaggttgat
gctttgcgccgcggtgttgatattttagtggcaacaccgggccgtttgctggatttaatg
aaccagcgttatgttcacctggagcatgttaaattcctgatactggatgaagccgaccgt
atgttagatatgggctttgttaacgatgttaaaaagatcatagctaaagtaccggcaaaa
aggcaaaccctgttcttttcggccactatgccaaaagagatccagagcctggcagatagt
atactgaataatcccgaaaaggttgaagttaccccggtttcatcaactgcggataccatt
cagcaagcagtttattatgtggataagggaaataaaaaatcattgctgatccatatcctg
aaagataaaagcattaaaaccgttttggtatttacccgtaccaaacatggcgccgataaa
gtggttaaagacctgaaccgtgtaggtatcactgccgaagccattcacggcaacaaatca
caaaatgcaaggcagcgtgctttaactaactttaaaaaccgcacaacccgagtattaata
gctacagatatcgctgcccgtggtattgatattgatgaccttacccatgttatcaactat
gagttgccaaacgtacccgaaacttatgtacaccgtattggccgtacgggccgggctggt
gccaatggcatagcattttcattttgcgatgctgaagagctggaatttttgaaagatatc
cacaagctaatagccaaacaaattccgattgaggaaggtcatccatacccgcttagtcca
gcagctatggcagctaaaataaacgaagcgcctaaaaaaggtggctccggcggcggccag
cgtggcggcggtggcggccggggcggccaccgcaggtcaggaggtggcggcaataaccgt
ccgggcggtaacggccgctcaggcggcaataaaagatcaggcggcagccgttcagaggct
ggtcgcggcggggccagcggtatgagtggagctaaaagaggataa
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