Mucilaginibacter gotjawali: MgSA37_04083
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Entry
MgSA37_04083 CDS
T05131
Symbol
rhlE_2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mgot
Mucilaginibacter gotjawali
Pathway
mgot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MgSA37_04083 (rhlE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgot03019
]
MgSA37_04083 (rhlE_2)
Enzymes [BR:
mgot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MgSA37_04083 (rhlE_2)
Messenger RNA biogenesis [BR:
mgot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MgSA37_04083 (rhlE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
AAA_19
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAU55891
UniProt:
A0A0X8X5B8
LinkDB
All DBs
Position
complement(4511578..4512882)
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AA seq
434 aa
AA seq
DB search
MSFEDLKLIEPILRALKTEGYTTPTPIQEQAIPIILQNRDLLGCAQTGTGKTAAFAIPIL
QLLYQDRLQHKEQKTIKALILTPTRELAIQIDESFAAYGKHTGLKHMVIFGGVSQNPQTD
ALRRGVDILVATPGRLLDLMNQRFVHLEHIRMLVLDEADRMLDMGFVHDVKKIIAKVPAK
RQTLFFSATMPNEIQQLANTILTKPEKVEVTPVSSTADTIQQALFYVEKSDKKSLLLHVL
KDKAIKNALVFTRTKHGADKVVKDLVRVGITAEAIHGNKSQNARQRALSNFKNRTTRVLI
ATDIAARGIDIDELTHVINYELPNIPETYVHRIGRTGRAGLNGIALSFCDEEEIEFLQDI
HKLIGKQIPVEEAHPYPMSPQSIVAKAAGGAKKGSGGGGHNSGGPKRGRGFGNANRGGAS
GLSGARSGSRDRRR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgaagatttaaaattaattgagccgattttacgtgctctgaaaacagaggga
tataccaccccaacccctatacaggaacaagctatccccattatattacaaaaccgcgac
ctgctgggttgcgcccaaacaggcaccggtaaaacggccgccttcgcaatccccatcctg
cagttattataccaggacaggctgcagcacaaggaacaaaaaaccattaaagcacttatc
cttaccccaacccgcgagctggccatccagattgatgaaagttttgccgcttatggcaag
cacactgggttaaaacatatggtgatttttggcggcgtttcgcaaaatccgcaaactgat
gctttaagaaggggcgtagatattttggttgccactccaggccgcctgcttgacctgatg
aaccagcgctttgtacacctggagcatatccggatgctggtactggatgaagccgaccgt
atgctggatatgggctttgtacatgatgttaaaaagatcatagccaaggtacccgccaaa
aggcaaaccttgtttttctcggctaccatgccgaacgagatccagcagctggccaatacc
atactaaccaaacccgaaaaggtggaagttaccccggtatcatctactgcggatacgata
cagcaggctttattttatgtagagaaatcggataaaaaatccttattgctgcatgtatta
aaagataaggccattaaaaatgccctggtatttacccgcaccaaacacggcgccgataag
gtagtaaaagacctggtacgcgttggcatcactgccgaggccatacacggcaataaatcg
caaaatgcacgccaaagggccttaagtaattttaagaaccgtaccacccgtgttttgatt
gcaactgacattgcggcccgcggtattgatattgatgaactgacacacgtaattaactac
gaactgcccaacatccctgaaacctatgtgcacaggattggccgtacgggccgtgccggg
ttaaacggaatagcactttcgttttgcgacgaggaagaaattgaatttttacaggatatc
cataaactgatcggcaagcagatccctgtcgaggaagcacacccataccccatgagcccg
caaagcattgttgcaaaagcagccggcggcgcaaaaaaaggttcgggcggtggcggccat
aactctggtggccctaaacgcggtcgcggttttggcaatgccaaccggggtggcgcaagc
ggcctgagcggcgcccggagcgggagtcgtgacaggaggaggtag
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