Meleagris gallopavo (turkey): 100538685
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Entry
100538685 CDS
T01523
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgp03041
]
100538685 (DDX18)
03009 Ribosome biogenesis [BR:
mgp03009
]
100538685 (DDX18)
Enzymes [BR:
mgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100538685 (DDX18)
Spliceosome [BR:
mgp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100538685 (DDX18)
Ribosome biogenesis [BR:
mgp03009
]
Eukaryotic type
90S particles
Helicases
100538685 (DDX18)
Pre-60S particles
100538685 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
100538685
NCBI-ProteinID:
XP_010712409
Ensembl:
ENSMGAG00000012345
LinkDB
All DBs
Position
7:complement(35885436..>35894263)
Genome browser
AA seq
626 aa
AA seq
DB search
GRGGRAVPEPLSAASYGSSSSPSPCPGRASLGPPEEDEEVKEAAAPEAEAETEAGERAAP
GLEAAGAKRRKKKKRKAAAGPEGGTETKKAKAEEDVSVEAGGEDGQDSEEKEAEEEDEVP
SLPLGLTGAFEDNSFTSLAGLVSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAK
TGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELAMQTYGVLKEVMNHHVHTYGL
IMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILEVGFE
EEMKQIIKLLPKRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDNKETATVDGLEQGY
VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKR
TTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRG
HALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYK
AYIRAYDSHSLKQIYNVGNLDLNKVSLSFGFKVPPYVDLNVNSNQGRRLQKRGGGGGFGY
QKPKSVHKAKIFKHISKKSDNRQFSR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
ggccggggcgggcgggcggtcccggagcctctgagtgccgcgtcttacggctcttcttca
tctccctctccgtgcccaggccgggcctcgctgggccccccggaggaggacgaggaggtg
aaggaggcggcggcccccgaggcggaggcagagacagaggcgggtgagcgggcagcgccg
ggccttgaggccgctggggcgaagaggaggaagaagaagaagaggaaagctgcggctggc
cccgagggaggtacagaaactaagaaagcaaaggctgaagaagacgtatctgtggaggca
ggaggtgaagatgggcaggattctgaagagaaagaagcagaagaggaggatgaagtgccc
agtttacctctgggtctaacaggtgcctttgaagacaattcttttacttcccttgctggt
cttgtaagtgagaatacattgaaaggcatcagtgatatgggttttacacacatgacagaa
attcagcataaaagtattaaacctcttctggaaggcagggatattttagcagctgccaaa
acaggcagtggcaaaacacttgcatttctcattcctgcagtagagctcatctacaaatta
aaattcatgcctagaaatgggacaggagttattattctttcacctactcgagagcttgcc
atgcaaacctatggagttcttaaagaagttatgaatcatcatgttcacacctatggtctg
atcatggggggcagtaacaggtcagcagaagctcagaaacttggaaatggaatcaacata
attgtagcaacaccgggaagacttctggatcatatgcagaacactccaggtttcatgtac
aagaacttgcagtgtttggtgattgatgaggcagatcgaatcttagaggttggatttgag
gaagaaatgaaacagatcataaaacttctaccaaagcgcaggcagacgatgctgttttct
gctacgcaaaccaggaaggtggaagatctagccaggatctctctgaagaaagaaccactg
tatgtaggagttgatgataacaaggagacagcaacggtagatggtcttgaacagggctat
gtagtatgtccatctgagaaaagattccttttgctcttcacgttcctgaagaagaaccgg
aagaagaaactaatggtatttttttcttcgtgtatgtcagtgaagtaccactatgaatta
ctcaactacattgatttgcctgttttggccattcatggcaagcagaaacaaacaaaacgt
actacaacatttttccagttctgtaatgcagaatctggaattctgttgtgcactgatgta
gctgccagaggactggatattcctgaggtggactggattgtccagtatgaccccccagat
gatccaaaagagtatattcatcgtgttggtagaactgccagaggtataaatggtagagga
catgctctgctcattttacgtccagaagaactgggctttcttcgttacctgaaacaagcc
agggtaccactcagtgaatttgagttttcctggtcgaagatttcagatatccagtctcag
ctggagaaactgattgagaagaactacttccttcacaagtcagcccaggaagcatacaaa
gcttacatcagagcttatgactcccattctctgaagcagatctataatgtgggtaacttg
gatcttaacaaagtcagcctctcttttggctttaaagtccctccatacgttgacctcaat
gtgaacagcaaccaaggcagaagactacagaaaagaggtggaggtggaggatttggttac
cagaaaccaaagagcgtccacaaagctaaaatcttcaaacacatcagcaagaagtcagac
aatcgacaattttctcgttaa
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