Meleagris gallopavo (turkey): 100539012
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Entry
100539012 CDS
T01523
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100539012 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mgp04131
]
100539012 (SCARF1)
Membrane trafficking [BR:
mgp04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100539012 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
100539012
NCBI-ProteinID:
XP_010720028
Ensembl:
ENSMGAG00000005116
LinkDB
All DBs
Position
21:complement(472736..478497)
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AA seq
979 aa
AA seq
DB search
MAEGRGMPWGHEGHRLKQPQGAVGWAMGQCPAGAVPCVRGLSPVPCIPLAAKVRNRQGRG
ILCLLLPPAPLAWGWDASSRVSSGRNQGWREEEAEPQERNPRTDRRMDRRSPGRMASTHL
LLCLQLWLWVQGSAQELDPNGRNVCKVGSPAVNLACCPGWKQEGRECTAALCEGEDACGP
REVCVRPGLCRCKPGFFGADCSSPCPAQYWGHDCKRLCLCHPGGTCEAESGRCTCNPERW
GELCQFRCPCGPHGRCDPTTGACRCEQGWWGPDCKRQCQCNLATSRCDPLTGHCHCRLGW
WGRKCRFKCSCNLSPCVQETGNCKCKAGFWGSACQWHCDCLHGSCNPLNGHCSCEPGFQG
RSCQDPCPAGMYGSQCVHSCGNCKHNQPCSSVDGFCLECQPGWNGTLCKERCMPGFHGQG
CLQPCPHCRQGDICDAETGSCPRCEPGWTGPSCNSSCPAGTFGDGCQLLCPECVWGSCDP
VSGDCLCQAGYWGASCNDTCPEGFFGVNCSSPCQCSRGTCHPAQGNCILSVTDHAALAAA
ILIPLLLLLLCVVCCCCGAGPADARDRAAVPDDDVVARMKHHVHVVLANISAMMPCFALN
NSKLPKVTVSHHDAEIPFNPSFIESPSAAWASDSSFSSFDTDNEGPEYSVPPREGVPLLS
GAELQAGMPPPSEALPDPTAFSSEDVSQPFTIPRTSSIAKAKRPSVSFAEGTKFSTAETP
SPGRKPKAMWGPSKLSLQSGDVGTEISAEQAASDGYESPDPLSKGDESHRPSPRATPGGR
RRMITNTRHVAQRVEALEAAAKRGSWDGKRKEPNVTTIYMTVGTAGQDPKAEGGVEGPVQ
AVLKRLGSLQRGRWAAKEEPMVRRSMEGIQKPPRRALAQRRDSANGCKQRESVPGAPGEL
CPGKEQHPPGKRQSFPLESTKSTGGQDGVGEGLGAAERGKSLELALSVETKGQVAQEEEP
KYENVSSRNEDAPTNPATT
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggggagggggatgccttggggacatgaaggacatcggctcaaacagcctcag
ggggcagttgggtgggccatggggcagtgcccggcgggtgctgttccctgtgtgaggggg
ctgagccctgtgccgtgcattcccttggcagcaaaggtcagaaacagacaaggccgtggc
attctctgcctcctccttccccctgcacccctggcgtggggctgggacgcctcctcccgc
gtttcctcaggaagaaaccaaggctggcgggaggaagaggctgagccacaggagagaaac
ccacggacagacagacggatggacagacgcagccccggcaggatggcgagcacccacctg
ctgctctgcctgcagctgtggctgtgggtgcagggctctgcccaggagctcgaccccaac
ggcaggaatgtctgcaaggtgggcagccctgccgtgaacctggcgtgctgccccggctgg
aagcaggaagggcgggagtgcacagccgctctctgcgaaggggaggacgcctgcgggccg
cgagaagtgtgcgtgagacctgggctgtgccgctgcaaacctggcttctttggtgcagat
tgcagctccccctgccctgcacagtactggggtcacgactgcaagcggctctgcctgtgc
caccccggtgggacgtgtgaggcggagagcgggcgctgcacctgcaaccccgagcgctgg
ggagagctgtgccagttccgctgcccctgcggcccccacggccgctgtgaccccacgact
ggagcctgccgctgtgagcagggctggtggggtcctgactgcaagaggcagtgccagtgc
aacctcgccacctcgcgctgcgaccctctcaccgggcactgccattgccggctgggctgg
tggggaaggaaatgcaggttcaagtgctcctgcaacctctcaccctgcgtccaggagacg
ggcaattgcaaatgcaaggctggtttttgggggtcggcttgccagtggcactgtgactgt
ttgcacggctcctgcaaccctctcaacgggcattgcagctgtgagccaggtttccagggc
aggagctgccaggacccctgcccagcagggatgtatgggtcccagtgcgtgcacagctgt
gggaactgcaagcacaaccagccctgctcatccgtggatggcttctgcctggagtgccag
cctggctggaacgggaccctgtgtaaggaacgctgtatgcccggcttccatggccaaggc
tgcctccagccctgcccacactgccggcaaggggatatctgtgatgcagagaccggttcc
tgcccacgctgtgagcctggctggacaggacccagctgtaacagctcctgccctgcaggg
acatttggtgatggatgccagctgctgtgccccgagtgtgtgtgggggagctgtgaccct
gtgtcgggtgattgcctctgccaggctggctactggggagccagctgtaatgacacctgc
ccagagggcttttttggggtgaactgttcctccccctgccagtgctcacgaggaacctgc
caccctgcacagggcaactgcatattgagtgtgacagaccatgcagctctggctgctgcc
atcctcatccctctcctcctgctgctgctttgtgttgtttgctgctgctgcggtgctggc
cctgcggatgccagagacagggcggccgtgccggatgacgatgtggtggccaggatgaag
caccatgtgcatgtcgtgctggccaatatcagtgctatgatgccttgcttcgccctcaac
aactccaagcttcccaaagtcacagtttcccaccacgatgcagaaatccccttcaacccc
agcttcattgagtcgccatcagccgcgtgggcttcagacagctccttctcctccttcgac
accgacaacgaagggccagagtactccgtccctcccagagaaggggtcccactgctgtca
ggggccgagctgcaggccgggatgccccctcccagcgaggcgctccctgaccccaccgcc
ttcagctctgaggatgtctcgcagcccttcaccattccccgcacctccagcatcgccaag
gccaagcggccctctgtctcctttgctgaggggacaaaattcagcacagcggagaccccc
agtcctgggcggaaaccgaaagccatgtgggggccatccaagctgtccctgcaatcagga
gatgtggggacggagatctccgctgagcaggcagccagcgatggttacgagagccctgat
cccctcagcaaaggggacgaaagccatcggccatcacctcgggccacgccggggggccgc
cggcggatgatcaccaacaccagacatgtggcccaaagggtggaagccctggaagcggct
gcaaaaaggggcagctgggatgggaaaaggaaggagcccaacgtcaccaccatctacatg
acggtggggacggctgggcaggaccccaaagctgaggggggtgttgagggtccggtgcag
gccgtgctgaagcgactgggcagcttgcagagaggaaggtgggctgccaaggaggagccc
atggtgaggaggagcatggagggcatccaaaaaccaccccgccgggccctggcacagcgt
agggattcggcaaatggctgcaaacagagggagagtgtgccgggggctcctggtgagctg
tgccctggaaaagagcagcatcctcctgggaagagacagtccttcccactggaatcgaca
aaaagcactgggggccaggatggggttggtgagggcctcggtgctgcagaaaggggcaaa
agccttgagctggccctaagtgtggaaacgaagggccaggttgcccaggaggaagagcca
aaatatgagaatgtgagcagcagaaatgaggacgcaccaaccaaccctgcgaccacctga
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