Meleagris gallopavo (turkey): 100539318
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Entry
100539318 CDS
T01523
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X9
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04010
MAPK signaling pathway
mgp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100539318 (CACNA1B)
04020 Calcium signaling pathway
100539318 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mgp04040
]
100539318 (CACNA1B)
Ion channels [BR:
mgp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100539318 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100539318
NCBI-ProteinID:
XP_010719096
Ensembl:
ENSMGAG00000002413
LinkDB
All DBs
Position
19:1973634..2233425
Genome browser
AA seq
2318 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWIVL
CVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFRDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAT
NQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYN
ELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRGEGRNNISKLSPVDVQEVEQTKISSSD
GAEAPRKHHRHRDKEKLGEQEKGDMTKDENGESGINNKEERHRQHRSRSKEVEGGSKEGK
SERIRGQEGGKRHHRRGSVEEGAEKEHRRHRTHRHSAERQGKEGNGTINGARSERRTRHR
GGSRSGNREGEPGSKGENGEEPHRRHRFRSRALSTYDSVEKENREKEGETAEKEHQNHQP
KENQCEIEASGSVSIPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVT
ITAPPGETTVIPMNNVEFESKAEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHY
IVNLRYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDL
GLLLHPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRL
PKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQ
YLDYEKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPS
PGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAIS
AKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKC
LNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADNFINLSFL
RLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALN
DETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSSRACDPLSGLTKNECGSDFAY
FYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRIS
YTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISPEDLTVHFTSTLMALIRTALEI
KLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYK
QNKNSREQVHQPPGGLCQPGPVSLFHPLKATLEQTQPSAFSNAKAFLRQKSSASLNNGGT
LPAPEGGIKESSSWGTQRTQDVFYETRTPAFERGHSEEIPIERVVEMREISPTLANGEHQ
PGLESQGRAASMPRLAAETQPIPDTSPMKRSISTLTPQRPHPMHLYEYSLERVPTDQVHH
HHHHRCHRRKEKKQKSLDRTTHQLADGEAVAQSGESSSKDKKQERGRSQERKQHSSSSSE
KQRFYSCDRYGSRDRSQPKSADQSRPTSPNGGPEQGPHRQGSGSVNGSPLLSTSGASTPC
RGRRQLPQTPLTPRPSITYKTANSSPVHFSTSPGGLPPFSPGRLSRGLSEHNALLRGDQQ
PPPAAVARIGSDPYLGHRDAADSPVSAAPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSH
QARRVPNGYHYTLGLNTGPGAGTRGRSYYHEADEDDWC
NT seq
6957 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggggatgatctaccaacacgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggtccccaagccggccaaaggatgtataagcagtcg
atggctcagagggcccggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatatgcc
aagagaataacagaatggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggagcaacatttgccggatggagacaagacacctatgtcagag
agattggatgacactgagccgtactttattggaatattttgttttgaagctggtataaag
atcattgctctggggtttgtttttcacaaaggctcttatctccgaaatggttggaacgtg
atggattttgttgtggtcctcacagggattctagcaactgctgggaccgacttcgacctg
cggaccctgcgagccgtccgtgtgctgcggccactgaagctggtgtcaggaatcccaagt
ctgcaggtcgtcctcaagtccatcatgaaggcaatggtgcctctgcttcagattgggctg
ctcctcttcttcgccatcgtgatgtttgccatcattgggttggagttctacatggggaag
tttcacaaaacctgcttctctaacgagacaggtgaagaggtgggagattttccttgcgga
gaggaacctcctgccaggcaatgcgagagtgggaccacctgcagggagtactggcaaggg
cccaactatggcatcaccaactttgacaacatcctctttgctgtgctcaccgtcttccag
tgcatcaccatggagggatggaccgacatcctctacaatacaaacgatgctgcaggaaat
acctggaactggctttacttcatccctctcatcatcatcggctctttcttcatgctcaac
ttggtgctgggcgtcctatcaggtgaatttgccaaagaacgagagagggtagaaaaccgt
cgagctttcctgaaactccgtaggcaacagcaaatagaacgggagctaaatggatatttg
gagtggatcttcaaagcagaggaagtcatgctggctgaggaagacaagaacgcagaagag
aaatctcctctggacgtgttgaaaagagccgcaataaagaagagcaaaaacgacctgatt
catgctgaagaaggtgaggaccatttcacagacatttgctccgttgggtctccttttgcc
cgtgccagtttgaagagtgggaagaatgagagctcatcctacttcaggaggaaagagaaa
atgttccgcttcttcatccggcgcatggtgaaagcccagagcttctactggatcgtgctc
tgcgtggttgccctcaacacgctctgcgtcgcgatggtgcactatgatcagccagagaaa
ctcaccactgctctgtatttcgccgagtttgtttttctgggtctgtttcttactgagatg
tctttgaagatgtatggactgggaccaagaaattactttcattcctcattcaactgcttt
gactttggggtcattgtgggaagcatctttgaagtcatctgggctgcagtgaaacctggt
acctcgtttggcatcagcgtgctgagagctctgcggctgctgaggattttcaaagtcacc
aaatactggaactccctgaggaacctcgtggtctccttgctgaactccatgaagtccatc
atcagtttgctctttctgctgttcctcttcattgtggtgtttgctctgctggggatgcag
ctctttggagggcagttcaattttagagacgaaacaccaaccacgaatttcgatactttt
ccagctgccattctcacagtgttccagatcctgactggggaggactggaacgcagtgatg
taccatggcatagagtcacagggcggtgtccactcggggatgttctcctccatttacttt
attgtcctgacgttgtttggtaactatacactcctgaatgtcttcttggccatcgccgtt
gacaatctggccaacgcccaagagctgaccaaggatgaggaggagatggaggaagccacc
aaccagaagctcgccctgcagaaggccaaggaggtagcagaagtcagccccatgtctgca
gccaacatttccatagccgccaagcagcagaactcctccaaatcgaagtcggtttgggag
cagcgaaccagccagatccggatgcacaatttccgagccagctgtgaggctctgtacaat
gaactggaccctgaggagcgggtgcgctacgccacgaccctacacatccgtccagacatg
aagacccacttggatcggccactggtagtggagccaaggggtgaagggaggaacaacatc
agcaagctgagccctgtggatgtgcaggaggtggagcagaccaagatcagctctagcgat
ggagcagaagctcctcggaagcatcaccggcatcgggataaggagaaattgggagagcaa
gagaaaggtgatatgaccaaagatgagaatggggaatctggcatcaacaataaggaggag
aggcacaggcagcacagaagccgcagcaaggaagtggaagggggcagcaaggaagggaaa
agtgagcgtatcaggggtcaggaaggagggaagaggcaccatcgccgggggtcggtggaa
gaaggcgctgaaaaggagcaccggaggcaccgcacgcaccggcactctgcagaacggcaa
ggcaaggagggcaatgggaccatcaacggggccaggagcgagcggcggacccggcaccgt
ggaggctcgaggtctgggaaccgggaaggagagcctggctccaagggtgagaatggagag
gagcctcacagacggcaccggttcaggagcagggcgttgtcgacgtacgattcggtggag
aaggagaacagggagaaggaaggggagactgctgagaaggagcaccagaatcatcagccc
aaggagaatcagtgtgagattgaggccagtgggagtgtgagcatcccggtgcacaccctt
cccagcacctatctgcagaaagtgccggagcagccagaagatgctgacaaccagaagaac
gtgacacgcatgattcagccgcctctggacaaaaccaccactgtgaacatccctgtcacc
atcactgccccgccaggagaaaccaccgtcatacccatgaacaacgttgagtttgaaagt
aaagcagaagagaagaaggacgttgatgacttgacaaaaaatgggcctaaaccaatcttg
ccttacagttccatgttcatcctaagtcctacgaacccgatccgccgtctgttccactac
atcgtcaacctgcgctacttcgagatggtcatcctcatcgtcattgctctcagcagcatt
gccctggcagcagaagaccccgtccaagcagaatcaccgaggaacgatgctctgaagtac
ttggattatatatttacgggtgtctttaccttcgagatggtgatcaagatgattgacctg
gggctgttactccaccctggctcctatttccgtgacctgtggaacatcttggacttcatt
gtggtcagtggggccttggtggcatttgcgttctcaggaaccaaaggcaaggacatcaac
acgatcaagtcgctgcgggttctgcgggtcctccgacctctgaagaccatcaaacggctg
ccaaaactaaaggctgtctttgactgcgtggtgaattccctgaagaacgtcctcaacatc
ctcattgtttatatgctcttcatgttcatctttgctgtcattgctgtgcagctcttcaaa
ggcagattcttctattgcaccgatgagtcgaaagagctggagaaggattgcaggggtcaa
taccttgactatgaaaaaaatgaggtggaggcgcagcccagagaatggaagaaatacgag
ttccattacgacaacgtgctgtgggctctgctgacgcttttcactgtctccacaggagaa
gggtggccaactgtgctgaagcactcagtggatgctacctacgaggaacagggtcccagc
cctggctaccgaatggaaatgtctatcttttacgtggtgtattttgttgtcttccctttt
ttctttgtgaacatctttgtggcgttaatcataatcaccttccaagagcaaggagataaa
gtgatgtcagaatgcagcctagagaaaaatgagagggcctgcattgacttcgccataagt
gccaagccactgacccgctacatgcctcagaacaagcagtcatttcagtacaagatgtgg
aaatttgtggtgtcccctccctttgagtattttatcatggtcatgattgcactcaatact
attgttctcatgatgaagttctatgatgctccagaagcatatgaagaaatgttgaaatgc
ctgaatattgtctttacatccatgttttcaatggagtgtgtgctgaagatcattgccttt
ggtgtgctgaattatttccgagatgcctggaatgtctttgattttgtaacagtgttggga
agtattactgatattttagtaacagagattgcggacaacttcatcaacctcagcttcctg
cggctcttcagggcagcaagacttatcaaactccttcgccagggttacactatccgcatc
ttgctctggacgtttgtgcagtcatttaaggccttgccttatgtgtgtcttctcattgca
atgctcttcttcatctatgccattattggcatgcaggtatttggaaacatcgcactaaat
gacgaaacctccatcaatcggcacaataatttccgtaccttccttcaagccttgatgctt
ctgttcaggagtgccacaggggaggcctggcatgagatcatgctgtcatgcctgagcagc
agggcatgcgacccactctctggcctcaccaagaacgaatgcggcagcgactttgcctac
ttctacttcgtgtcattcatcttcctctgctccttcctgatgttgaacctatttgtggct
gtaatcatggacaactttgaatacttgacaagagactcctccatccttgggccccatcat
ttggatgagtttgttcgtgtctgggctgaatacgacccagctgcctgcgggcgcatcagt
tacacagacatgtatgagatgctgagacacatgtccccacctctaggccttggaaagaaa
tgccctgctcgcgttgcctataagcgcctggtgaggatgaacatgcccatctcacccgag
gatctgacagtccacttcacctccacgctgatggccctgatccgcactgctctggaaatc
aagcttgcctcagggggtgttaagcagcaccagtgtgatgctgagctgagaaaggagatc
tctctggtttggcccaacctgtcccagaagacactggatttgctggtgcctcctcacaaa
cctgatgagatgaccgtggggaaggtctacgcagcgctcatgatatttgacttctacaaa
cagaacaagaacagcagggaacaagtccaccagcctcctggggggctgtgccagcccgga
ccagtgtcactcttccaccccttgaaggccactttggagcaaacccaaccctcagcattc
agcaacgcgaaggcattcctgcgccagaaaagctcagcctcactcaacaacgggggcaca
ttgccagccccagagggtgggatcaaagagtccagttcctgggggacccaacgcacccag
gatgtgttttatgaaaccaggacaccagcttttgaacgaggccactcggaggagatcccc
attgaacgggtggtggaaatgagggaaatcagccccacgcttgccaatggagagcaccaa
ccagggctggagagccagggtcgggcagcttccatgccacgcctggctgccgaaactcag
cccatcccggacacgagccccatgaagcgttccatctccacgctgaccccgcagcgtcca
catcccatgcacctctatgagtactccctggaacgtgtgcccacggatcaggtgcatcac
caccaccaccaccgctgccaccggcggaaagagaagaagcagaagtccttggataggacc
acgcatcagctggccgacggggaagctgtggcccagtctggtgaatcttcttccaaggac
aagaagcaggagcgtggacggtcccaagagaggaagcagcactcttcctcctcttcagaa
aagcagcgcttctactcctgtgatcgctatggcagccgggaccgatcccagcccaagtct
gctgatcagagcaggcccacttcgcccaacggtgggcctgagcaaggtccccacagacag
ggcagtggttcggttaacgggagccccttgctgtcgacatctggtgctagtaccccctgc
cggggtcggaggcagctcccgcagacccccctgaccccacgccccagcatcacttacaag
accgccaactcctcgcccgtccacttcagcacgtcgccgggcggcctcccgcccttctcc
ccgggccgcctgagccgcgggctgtctgagcacaatgcactcctgcgtggggaccagcag
ccgcccccagccgcggttgcccgcatcggctccgacccttacctgggccaccgcgacgcc
gccgacagccctgtgagcgcagcgcccgaggacacgctcaccttcgaggaagccgtggcc
accaactcggggcgttcctccaggacttcttacgtctcttccttgacctcccagtctcac
caagcacgccgggtgcccaatggctaccattacacgttggggctcaacacggggcccggc
gccggcaccaggggacggagctactaccacgaagccgacgaggacgactggtgctag
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integrated database retrieval system
