Meleagris gallopavo (turkey): 100539427
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Entry
100539427 CDS
T01523
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgp03021
]
100539427 (CHD1)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100539427 (CHD1)
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100539427 (CHD1)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100539427 (CHD1)
SLIK complex
100539427 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
100539427
NCBI-ProteinID:
XP_031413284
Ensembl:
ENSMGAG00000004942
LinkDB
All DBs
Position
Z:45535448..45754740
Genome browser
AA seq
1789 aa
AA seq
DB search
MRAVYIHDFLCSYKDTARCCLQVISYWLIYNRTRLINSYIPVSSSATGASTTIYAVEADG
DPNAGFEKSKEPGDIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLEL
RDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKS
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEVWQLFFPTLLFFPRNIDSSSSEDSADDSSSETKKKKHKDEDWQMS
GSGSVSGTGSDSESEEDGDKSSCEESESDYEPKNKVKSRKPPSRIKPKSGKKSTGQKKRQ
LDSSEEEEDDDEDYDKRGSRRQATVNVSYKEAEETKTDSDDLLEVCGEDVPQTEEDEFET
IEKFMDSRIGRKGGPFPPVWDLSFYIKPLVALEAVVQQAAQIVADLGETERLHTRCNIRV
VEEAEVLSVVKTKRPPMQNSQSWPVRVSCKQMFNDLIRAGVQFAKIDRQPNRICLQLKGN
QRFQNYPKKPRGKGPAISSRVSGCLCWQESARVLGQAATQNTADKMVALDLRAMDLRKSK
IHWTEEAATKCKKYNRFGTPSSEESPCLNKIMYLFGENTYVPKHKVANFSNMDEDDIELE
PEQNLRNWEEIIPEVQWRRIEEEERQKELEEIYMLPRMRNCAKQISFNGNEGRCSRSRRY
SGSDSDSISERKRPKKRGRPRTIPREIIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDA
ELVDKSETDLRRLGELVHNGCIKALNDNDFGQGRTGGRFGKVKGPTFRISGVQVNAKLVI
SHEEELAPLHKSIPSDPEERKRYVIPYHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEM
IKMDPYLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRKK
TRSKKNKTTKTAKIKEIKNDSSSPPSEKSDEDNEDEIVSVKYLHKKIKAEKENEEKDGPD
VGIKTEAGEKRETKEKENKRDLRWEKKEKEDKKELKYIKEKRENKVKEFTQKVKEVKEEK
INEIKSEYKEKNKKVPLLDIPVHITAISEPVPISDESEELDQKTFSVCKERMRPVKAALK
QLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFD
ARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVERLKETTNHDDSSRDSYSSD
RHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWDHYKQDNRYYSDSKHRKLD
DHRSRDHRSNLEGNLKDSRGHSDHRSHSDHRIHSDHRSTSEYGHHKSSRDYRYHSDWQMD
HRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgtgtatattcatgattttttgtgctcatataaagataccgctagatgctgt
ctacaggttatttcttactggttaatttataacagaacccgcttaattaatagttacatt
ccggtttcttcctcagccactggtgcctcaaccaccatctatgccgttgaggcagatggt
gacccaaatgctgggtttgaaaagtcaaaggagccaggagacatacagtatcttattaaa
tggaaaggctggtcacacatccataacacttgggaaactgaagaaacactgaagcaacaa
aatgttaaaggaatgaagaaactggacaactacaagaaaaaggatcaggagacaaaacga
tggctgaaaaatgcttctccagaagatgtggaatattataattgccagcaggagcttaca
gatgatctgcataaacaatatcaaatagtggaaagaataattgctcattcaaatcagaag
tcagcagctggctatccagactactattgcaaatggcagggtttaccttactcagaatgt
agctgggaagatggtgctctcattgccaaaaagtttcaggcacgcattgatgagtatttt
agcagaaatcaatccaagactactccctttaaagactgcaaggttctaaaacagagacca
agatttgttgcactaaagaagcaaccatcttacataggaggacatgaaagtttggagtta
agagattatcagttaaatggattgaattggctcgctcattcatggtgcaaagggaatagt
tgtattcttgcagatgaaatgggtctgggtaaaacaatacaaacaatttcttttctgaac
tacctgtttcatgaacatcaactgtatgggccttttctactggtcgtgccactttctacc
ttgacatcttggcaaagagagattcaaacttgggctcctcagatgaatgctgtagtttac
ttaggagatataactagtagaaatatgataaggactcacgaatggatgcatccacagact
aaacgattaaagtttaacatacttctgacgacatatgaaattttactgaaggataagtca
ttccttggtggtctcaactgggcattcattggagttgatgaagctcatcgtttaaaaaat
gatgactctttgctgtacaagactttaatagactttaagtccaaccatcgtcttcttatt
actggaacccctctgcaaaactccctcaaagagctgtggtctttgttgcatttcatcatg
ccagaaaaattttcctcctgggaagattttgaagaggagcatggcaaaggaagagaatat
ggttatgcaagtcttcacaaagagcttgaaccatttttactgagaagagttaaaaaagat
gtagaaaagtctttacctgccaaggttgagcaaattctgaggatggaaatgagtgcactg
cagaagcagtattacaagtggattttaacacggaattataaagccctcagtaaaggttcg
aaaggcagtacctcaggctttctgaacattatgatggaacttaagaagtgttgtaaccat
tgctacctcattaaaccaccagatgataatgaattctataataaacaggaggccttacag
catttgatacgtagcagtgggaaactaatccttcttgacaaactactgattcggctgcga
gaacgtggcaacagagttctgattttctctcagatggtgaggatgctggacatcctagca
gaatatctaaagtaccggcagtttcccttccagagacttgatggatcaataaaaggggaa
ttgagaaagcaagcactggatcatttcaatgcagaaggatcagaggtatggcaattattt
tttcctactttgctctttttcccaagaaacattgactcatccagtagtgaagattctgct
gatgattcatccagtgaaaccaagaagaaaaagcataaagatgaagactggcaaatgtca
gggtcagggtcagtatcaggaactggttctgattctgaatcggaggaagatggggataaa
agcagctgtgaagaaagtgaatctgactatgagccaaaaaacaaagtcaaaagccgtaaa
cctccaagcaggattaagccaaaaagtgggaaaaagagcacaggacagaagaagaggcaa
cttgattcatcagaggaggaggaggacgatgatgaagattatgataagagaggatctcgt
cgccaggcaacagtgaatgttagttacaaagaagctgaagaaaccaagacagattctgat
gatttactggaagtttgtggagaagatgtcccacagactgaggaagatgaatttgaaact
atagagaaatttatggacagtcgaattggccgaaaaggaggccccttcccacctgtatgg
gaccttagtttctatattaaacctctggtggccttggaagctgtggttcaacaagctgcc
cagatagtagctgatctgggggagacagagcgtctgcacactaggtgcaatatccgagta
gtagaagaagcagaggtgctctcagtagttaaaaccaagaggccacctatgcagaactct
cagtcatggcctgtaagggtctcatgtaaacaaatgtttaatgaccttattcgggctggg
gtccaatttgcgaagatcgatcgccagcccaatcgcatctgccttcagctgaagggtaat
cagagattccagaactacccgaagaaaccaagggggaaaggtcctgctattagttccagg
gtctctggctgcctgtgctggcaggagtctgctagggtcctcggccaagctgccacacaa
aacacagcagacaagatggtggcactggatttaagggcaatggatttaagaaagagcaaa
attcactggacagaggaagctgcaacgaagtgtaagaaatacaaccgttttgggacacca
agttcagaagagagtccttgtttaaataaaatcatgtatctatttggtgaaaatacttat
gttccgaaacataaggtagctaacttttccaatatggatgaagatgacattgagttggaa
ccagaacaaaatctaagaaactgggaagaaatcattccagaagtccagtggcgacgaata
gaagaagaggaaagacaaaaagaacttgaagaaatatatatgcttccaagaatgagaaac
tgtgcaaaacagatcagctttaatggaaatgaagggagatgcagtaggagcagaagatat
tctggatctgatagtgattccatctcagaaagaaaacgaccaaaaaaacgtggacgacca
cgaactattccccgtgaaatcattaaaggatttagtgatgcggagattagacgatttatc
aagagttacaagaaatttggtggcccacttgaaaggttagatgctatagctagagatgct
gagctagttgataaatctgaaacagaccttagacgtctgggagaacttgtacataatgga
tgcattaaggctttaaatgataatgactttggtcaaggaagaacaggtggtagatttggg
aaagttaaaggcccaacattccgaatatcaggagtgcaggtgaatgcaaagctagtcatt
tctcacgaagaagagttggcaccattgcataaatccattccttcagatccagaagaaagg
aaaagatatgtcatcccataccacaccaaagcagctcattttgatatagattggggtaaa
gaagatgattccaatctgttaataggtatctatgaatatggttatggtagttgggaaatg
ataaaaatggatccttatctcagtttgacacagaagattttacctgatgatccagataag
aaaccccaggctaagcagttacagactcgtgcagactacctcattaaattgctgaataaa
gaccttgcaagaaaagaagcgcagagacttgctggtgcaggcaattcaaagaggaaaaaa
acaagaagtaagaagaataaaacaacaaagactgcaaaaataaaagaaataaagaatgac
tcctcatcaccaccctcagaaaaatctgatgaggataatgaggatgagattgtttcagtg
aaatatctacataaaaaaataaaagcagaaaaagaaaatgaagaaaaagatgggccagat
gttggtataaagacagaagctggagaaaaaagagagacaaaagaaaaggaaaataagagg
gatttgagatgggagaaaaaagaaaaagaggataagaaagaattaaaatatattaaagaa
aagagagaaaacaaagtaaaagaattcacacagaaagtaaaagaagtaaaggaagagaag
ataaatgaaatcaaatctgaatataaagaaaaaaataaaaaagttccattattggatatt
ccagttcatattactgcaattagtgaaccagttcctatatctgatgaatctgaagaactg
gatcagaagacattcagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcactgaaa
cagctggatagaccagagaagggcctttctgaaagggagcagctggaacatactaggcag
tgtctaatcaaaattggggatcacattacagaatgcctgaaggagtacacaaatccagag
caaataaaacagtggaggaaaaacttgtggatttttgtctccaagtttacagaatttgat
gccagaaagctgcacaaactctacaaacatgcaatcaaaaagcgccaagagtctcagcag
cacaatgaccaaaacattagcagcaatgtgaatacacatgtaatcagaaatccagatgtg
gaaagactgaaggagactacaaaccatgatgacagtagcagggatagttattcttctgat
agacatttatcacaataccatgatcatcacaaagacaggcatcagggagatgcctataag
aaaagtgactctaggaaaaggccgtattcagccttcagtaatggaaaagatcacagagac
tgggatcactacaaacaggacaacagatactacagtgatagtaaacatagaaagttagat
gaccacagaagcagagatcacagatcaaacctggaaggaaacttaaaagacagccggggt
cattcagatcaccgctcccattcagaccacaggatacactcagatcaccgttccacttca
gaatacggtcatcacaaatcttccagagattatagataccactcagactggcaaatggac
cacagagcttctggtagtggcccaaggtcaccactagatcagaggtctccgtatggttca
aggtctcccctaggacacagatctccatttgaacactcgtcggatcacaaaagtacacct
gaacatacatggagtagccggaagacataa
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integrated database retrieval system
