Meleagris gallopavo (turkey): 100539853
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Entry
100539853 CDS
T01523
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgp03021
]
100539853 (SCAF4)
03041 Spliceosome [BR:
mgp03041
]
100539853 (SCAF4)
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100539853 (SCAF4)
Spliceosome [BR:
mgp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100539853 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100539853
NCBI-ProteinID:
XP_003202952
Ensembl:
ENSMGAG00000014515
LinkDB
All DBs
Position
1:102266279..102299805
Genome browser
AA seq
1094 aa
AA seq
DB search
MFFVVSFFVSVQLFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEY
KVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQ
KNGVFKIEIIQPLLDMAAGTSTAAPMTENATNNEGSPPPPAKVASEPPQVTANSVPTMPQ
LPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKAQSPVIDNTVMAQVQAITAQLKTTAS
QPPEQKAAFPQPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPALTSLSFS
AQAGWCSIPGGFAGEGIQQPVFPQLPNMDPFQQRMMGMQQDPMRHQVPLPPNGQMPGFGL
LPTPQFPPMAQPVIPPTAPVQQTFQTPFPVQSESHMQKTHQQNMEVEQPPIQERKRHVSD
NRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERER
RSKGLPQIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVM
VHRQDAYRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPE
DLESFCEGGMLDNETLSPEWKGIPKKAENEVAQNGGAEAAHNEPVSPIPKALPVPIPVPM
PAPITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPM
HLPPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGVNEDTTKDASVGNPIPTVVSGSRG
NAETTDNSKIYATVPPPVAPTNVPAPVTQAIPLLGTQGVAPPPPAPVVGLQTPSTGLLGA
RPGLIPLQRPPGMPPPPMQRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPP
GHFVRPGGMPGSGGPSGPEENRDGRQFRNDRQTFTPNRDQERFGRRSFGNRVENDRERYG
NRSDDRDHERLGNRDRREWGRRSPERDRHRDMEDRNRRSSGHRDRERDSRDRESRRDKEE
NRGKEKPEVTDRADGDKNHESHSGKMEDADVVSELPKGESEPSGVKPEEELTSEATSSVE
QAEKDLSAVAEAPR
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgtggtttctttttttgtttctgttcagctcttttcactgatggagatgaaa
cctcctatttcccgagcaaaaatgattctcatcacaaaagctgccattaaagctatcaag
ctctacaaacacgttgtccagattgtagagaaatttatcaaaaagtgcaaaccagaatat
aaagttcctggattgtatgttattgactctattgttcgtcagtctcgtcaccagtttgga
acggataaggatgtctttgggccaagattctctaaaaatattactgccacattccagtat
ttgtatctctgtccatctgaagacaagagtaaaatagtccgtgtcctgaacctttggcag
aaaaatggtgtctttaaaattgaaatcattcagcctcttctggatatggcagcaggaact
agcacagctgcaccaatgacagaaaacgccactaataatgaaggttcaccaccccctcca
gcaaaggttgcttcggagccccctcaagtcactgctaattctgtacctactatgccacag
ttgcccagttctgatgcctttgcagctgtagctcagttgtttcaaacaacgcaaggacag
cagcttcagcaaattcttcagactttccagcagcctcagaaagctcagtctccggtcata
gataacactgtgatggctcaggttcaagctattactgctcaattaaaaactacagcatca
caaccaccagaacaaaaagctgctttcccacaacctgagcaaaaaacatcatttgacaaa
aagctgctagatcggtttgactatgacgatgagccagaagcagtggaagactcaaagaaa
gaagattcagctccttctccttcagtttctcagcctgccttgacctctctctcattcagt
gcacaggctggatggtgctcaatacctggtggatttgcaggagaaggcatacaacagcca
gtatttcctcaactcccaaatatggatccttttcaacaacgaatgatgggaatgcaacag
gatccaatgcgccatcaggtcccacttcctcctaacggacaaatgccaggttttggtctc
cttcctaccccccagtttccacccatggctcagcctgtgattccaccaacagctcctgtg
cagcaaacttttcagactcctttcccagtgcagagtgaatcgcacatgcaaaaaacacat
cagcagaacatggaagtggaacagccacctattcaagaaagaaaacgacatgtttctgac
aacagaaagtcaaggtctagatctgcatcaaggtcacctaaaaggagaaggtcgaggtcc
ggctcccgctctcgaaggtcacgtcatcgtcgatctcggtcacgatccagggacaggcgc
cggcactctcctaagtctcgatcacaagaaagacgtgaacgtgagagggagagagaacgc
aggtcaaaaggccttcctcagatcaaatcagaaactgttagtgtttgtagtactacgctt
tgggtaggacaacttgacaaaaggactacgcagcaggatgttggaagtctcttggaggag
tttggcccaatagaatcaataaatatgataccaccgagaggatgtgcctatattgtaatg
gttcacagacaagatgcttatcgtgccctacaaaaattgagcagaggcaacttcaaagtc
aatcaaaaatctataaagattgcctgggctttgaataaaggaataaagccagattacaag
cagtattgggatgtagaattaggtgttacttacataccgtgggacaaagtgaagcctgaa
gatcttgaaagcttctgtgaaggtggaatgttggacaatgaaactcttagtccagagtgg
aaggggattcccaagaaggctgaaaatgaagtagctcagaatggtggtgcagaagctgca
cataatgaaccagtgtcacctatacctaaagctttacctgttccaattcctgttcccatg
cctgcaccaattacagtacctcctccgcaggttccaccgcatccctcaggtcctcctgtg
gttggtgcactccagccacctgctttcacagcgcctttaggaattccgcctcctggattt
gctcctggagtaccaccaccaccaccacctccatttttacgacctggtttcaacccaatg
catttgcctccaggctttcttcctcctggaccaccaccacctataactcctccagtatct
gttcctcacactccagcagtaaacatcccaaactctacagcaactggagtaaatgaagac
actacaaaagatgcatctgtaggaaatcccatcccaacagtggtttctggatccagaggg
aatgctgaaactactgataattccaaaatatatgcgactgttccacctcccgtagcacct
actaatgtacctgctcctgtcacccaagctattccgcttcttggcacccaaggagtcgcg
ccaccccctccggcccctgttgttggcttgcagactccatccaccggcctcctgggtgct
cggccaggcttgataccgctgcagcgaccgccaggaatgccaccgcctcctatgcagcgc
ttccccatgatgccaccgcgacacatgccgccccacatgatgcacagagggcccccaccg
ggcccggggggcttcgggatgcctcctccccatggaatgaaaacccccttccctccgccg
ggccactttgtgaggcctggcgggatgccgggaagcggagggcccagcggacccgaggag
aacagagacgggaggcagttcaggaacgacaggcagacgttcacccctaacagagaccag
gagaggttcggaaggagatcttttggcaatcgggtagaaaatgaccgcgagcgctacggc
aaccgcagcgacgacagagatcatgagcggcttggtaatcgtgacaggagagaatggggg
agaaggagcccagagcgcgataggcacagggacatggaggacagaaacagacggtccagt
ggacatcgagacagagagagagattctagagatagggagtctcgcagagacaaggaagaa
aaccgaggaaaggaaaaacccgaggtgacagacagggcagatggtgacaaaaaccacgaa
tctcatagcggcaaaatggaagacgcagacgttgtttcagaacttcctaaaggagagtct
gaaccttcaggcgtaaagcctgaggaagagttaacatctgaggctacctcatccgtggaa
caagctgaaaaggatctgagcgcggtcgcggaggctcctcgctag
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