Meleagris gallopavo (turkey): 100539924
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Entry
100539924 CDS
T01523
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X5
KO
K16498
protocadherin delta 1
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100539924 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mgp01009
]
100539924 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mgp04515
]
100539924 (PCDH11X)
Protein phosphatases and associated proteins [BR:
mgp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100539924 (PCDH11X)
Cell adhesion molecules [BR:
mgp04515
]
Cadherins
Protocadherins
100539924 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Fibulin_C
Cadherin_4
TMEM154
Big_9
DUF6249
Motif
Other DBs
NCBI-GeneID:
100539924
NCBI-ProteinID:
XP_010713540
LinkDB
All DBs
Position
9:complement(6589572..6982885)
Genome browser
AA seq
1095 aa
AA seq
DB search
MASEWRLPNAFVCFSAIKATPGVLHEPSLVNLEMDLLSGTYLLAVLLACIVFQSGAQEKN
YTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTT
ANRIDREKLCSGIFSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINIS
IPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDIIE
TPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKE
NDIEVSIPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKKLFAIDNATGLITI
REPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLS
EKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYESTRE
YAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISAT
DADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQ
TNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAAVTLSILN
GRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRP
VFVIPSSNYSYELVPTSSSPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFAIDQLTG
NITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYIQELVRRNME
TPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQS
GEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQ
TMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFV
VGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQCALVASHLLDLQCQQPKMALIF
AILHPVSYCQCLDFV
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgagtggcgtctgcctaacgcttttgtttgtttctctgctataaaagctact
cctggtgttctgcacgaaccttcgttagtcaatttggaaatggacttgctgtctggaacc
tacctcttggcagtcttattagcctgtattgtatttcaatctggagcgcaggagaagaac
tatacagtgcgggaagaactgcctgaaaatgtcctcattggcaatttgctcaaggatctt
aatttaacactggatccagatgtccccctttcctcgccgctacagttcaagcttgtatat
aagactggggatgtaccactagtacgagtggaagagaacactggtgagatatttacaact
gcaaaccgcatagaccgagagaagctgtgctctggcatctttagtgagaatcgctgcttt
tatgaggtggaggttgctgttctgcctgatgaagttttcagactggtcaagatcagattc
ctaatagaggatataaatgacaatgcccccctcttcccttctacagttattaacatctct
atccctgaaaacacagcgattaattctcgctattctgttccatctgccattgatccagac
attggtgtgaatggtattcaacattatgaactacttaagcccaaaacagctccgaaaagg
acgtttggatcaattacaaatgatcagggtcagaatgtatttggtcttgatataattgag
acacctgagggagataagtggcctcaactgattgtccagcagatcctggatagagagcag
aaggatacctatgtgatgaaaattaaagttgaagatggtggaagtcctccaagatccagc
actgcaatcctgcaagtcacagtgactgatgtgaatgataatcgcccagtctttaaagag
aacgacattgaagttagtattccagaaaatgctccagtgggcacctctgtttctcagctc
catgccactgatgcagacttgggctcaaatgcacaaatccacttctatttcagcaatcaa
atctccagcttggccaaaaagctgtttgccattgataatgccactggtctcatcaccata
agagagccacttgacagggaagaatctcctgtacacaaattaactgttttggcaagtgat
ggcagttcaactccatcgagagcaacagtgactgttaatgtcacagatattaatgacaat
gtcccatcaatagacacgagatacatcatcaatccagtgaatgggacagtgcttttgtct
gagaaagctccacttaatacaaaaattgcattgataacagtaatggacaaggacgctgat
ctgaatggaaaagttacttgttttacagatcatgatgtcccttttagactaaagccagtg
tttgataatcagtttcttctggagacagctacatttctagattatgaatccacacgggaa
tatgctattaaaattgtagcttcagattcaggtaaacctcccttaaaccaatctgcaatg
ctcttgatcaaaattaaagatgaaaatgacaatgccccagttttcacacagcctatcata
ggtctttccatccctgaaaacaatgctcctggtactcagctaaccaagataagtgctaca
gatgccgacagtgggcgcaatgctgagatcagctatattctgggttctgatgcaccccct
attttcaaccttgaccgccgtacaggcattctgacagcagtgagaaagctggacagagaa
aaacaagacaggtactccttcactgtactggctaaggataatgggatgccacccttgcaa
accaatgctactgtgacagtgtcagtcctggaccagaatgataacagccctgcttttaca
cacaatgaatataatttctatgttccagaaaacttacccatgtatggcacagtagggctt
atcacagtaacagatgctgattctggagagaatgctgcagtcactctgtctatattaaat
ggtcgagataatttcattatcgatccacttactggtgtaataagacctaatattactttt
gatagagaacagcaggggtcatacacttttcaggtgaaagcggtggatggaggaagactg
cagcgttcctcaacggccaaagtgacgatcaatgttgttgatgtaaatgacaacaggcct
gtttttgtaattccttcgtcaaattattcatatgagttggttccaacatcatccagtccg
gggtctgttgttacaaaagtctttgcagttgataatgacacaggaatgaatgcagagctc
cgttacagcattataggagggaattcaaggggcttgtttgcaattgaccaattaacaggc
aatattacattgaaagagaaggtaattacatcagatcatggcttgcacagactggtgata
aaagtcaatgacctaggacagccagagtccctttatactatagctcttgtgcatttgttt
gtgaatgagacagtcaccaatagttcctacatacaagagctagtgcgcaggaatatggaa
actccagttggccagaacattggggatggtgagataaccccacaaaccaatgattatgtc
aagatcataattgcgattattgcaggcacaatgacagttattctggtaatttttgttact
gcgttagtacggtgccgccagactcccaggcacaaagttgtccagaaaaataagcagagt
ggtgagtgggtttccccaaaccaagagaataggcagatcaagaagaagaagaagaagaag
aaacgctctccaaaaagtcttctcctcaactttgtgactattgaagaatctaagcctgat
gatcctggccatgagcacataaatggcactttagacattcctgtagaactagaagagcag
actatgggaaaatataactgggccactacaccaaccacatttaagcctgatagcccagat
ttagcaaagcactacaagtctgcttctccacagccaacctttcaaattaaacctgagact
cctgtaccccccaagaagcaccatgtcattcaggaactgcctctggataacacctttgtg
gtgggctgtgactcactctccaagtgctcatcaagcagctcggacccttacagtgtttct
gaatgcagctgtcaaggaggcttcaagaccccaggccccattcacaccagacagtgtgca
ttagttgcctcacatcttttagatctgcagtgccagcagccaaagatggctctcatattt
gccattctgcatcctgtgtcatattgtcagtgcttggatttcgtatga
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integrated database retrieval system
