Meleagris gallopavo (turkey): 100540228
Help
Entry
100540228 CDS
T01523
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03013
Nucleocytoplasmic transport
mgp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100540228 (PNN)
03015 mRNA surveillance pathway
100540228 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100540228 (PNN)
03041 Spliceosome [BR:
mgp03041
]
100540228 (PNN)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100540228 (PNN)
Spliceosome [BR:
mgp03041
]
Complex C
Other components
EJC/TREX
100540228 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
100540228
NCBI-ProteinID:
XP_003206648
Ensembl:
ENSMGAG00000012573
LinkDB
All DBs
Position
5:36683268..36693452
Genome browser
AA seq
667 aa
AA seq
DB search
GPGGAAERCAVFRRPPQNRLLALSGPGGGRGRGSLLLRRGFSDSGGGPPAKQRDLEGASS
RLGGERRTRRESRQESDGEDDDIKKPALPSSVVATSKERTRRDLIQDQNMDEKGKQRNRR
IFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQAEEERKQVENERRELFEERRAKQT
ELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPHLFYIPGRMCPATQKLMEESQKKMN
AIFESRRNEFAEQINKMEARPRRQSMKEKEQQEVQNEEKKEEQNKEQEEGKVVQQVEELE
TGNQHNDVEMEEVGEEKGKIGSGHSDAEKEQEEEEQKHEIEIKVEEAAEVRENDKQQDGQ
HEEVTVVKEENENIQPVDNEQDMAEVNEADSVEPVDNENGKEVEPEMECDAQPEKACDIP
SPEKEKVIKTETEAEPEEKQERASEAQPEPMAEALSHPQSVPPPQSPQLSQSVQDTEPQA
DKDENAVVSVKVEAQAEQNQALSAEIKNKTRSRSRGRAGNKAAKSHSRSSSSSSSSSTSS
STSSGSSSSTGSTSSRSSSSSSSTSGSTSRDSSSSSSTSSESRSRSRGRGHNRNRKRRRS
AERKRRDASGVDRSHKSSKGGSRDAKSSKDKSSRSDRKRSISESSRSGRRTSRSERDRKS
DRKDKRR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
ggcccgggcggtgccgctgagcgctgtgctgtcttccgcaggccccctcagaacagactg
ctggccctctcaggccctggtggaggtagggggcgagggagcttactgctgaggcgtgga
ttctcggatagcggaggaggacccccagccaaacagagggatcttgaaggggcatccagt
aggctgggtggagagcgtcggacgagaagagaatcacgccaagaaagtgacggagaggat
gatgatattaaaaagccagcattaccatcttctgttgttgctacctccaaagagcgaaca
cgtcgagaccttatacaagatcaaaatatggatgagaagggaaaacaaaggaatcgacgt
atatttggcttgttgatgggcactcttcaaaaatttaagcaggagtccacagttgctact
gagaggcaaaagagacgacaagaaattgaacaaaaacttgaagtacaagcagaggaagaa
agaaaacaagttgaaaatgaaagacgagaactgtttgaagaaaggcgtgctaaacaaacg
gagctgcggttactggagcaaaaggttgagcttgctcagttgcaagaagaatggaatgaa
cataatgcaaaaataattaaatatataagaacaaagacaaaacctcacttattctacata
cctggcagaatgtgtcctgctacgcaaaagttgatggaagaatcacagaaaaagatgaat
gcaatctttgaaagcaggcgcaatgaatttgcagagcagattaacaaaatggaggccagg
cccagaagacaatctatgaaggaaaaagaacagcaggaggtgcagaatgaagaaaagaag
gaagaacagaacaaggagcaggaagagggtaaggtggttcagcaggtggaagagttggag
acaggtaatcagcacaatgatgtagaaatggaagaggtaggggaggagaagggaaaaata
ggttcagggcatagtgatgcagagaaagaacaggaagaggaagaacagaaacatgaaata
gagattaaagtagaagaggctgctgaggtgagggagaatgacaagcagcaggatggtcag
cacgaagaggtcacagttgtaaaagaggaaaatgaaaatattcagccagtggataatgag
caggatatggctgaagtgaatgaggcagatagcgtagaacctgtagataatgagaatggc
aaagaagtggaaccagaaatggaatgtgatgctcagccagaaaaagcgtgtgatattcct
tctcctgaaaaggagaaagttatcaaaacagaaactgaagccgaacccgaagaaaaacag
gagcgggcatctgaagctcagccagaacccatggctgaggccttatctcacccacagtct
gtgccaccaccacagtcacctcagttatctcagtctgttcaggatacagagccccaggca
gacaaagatgaaaatgctgtggtgtctgtaaaggtcgaggcacaggcagagcagaatcag
gcactgagtgcagaaataaaaaataagactagaagtagaagcaggggtagggcagggaac
aaagctgctaagagtcatagtcgcagcagcagcagcagtagtagcagtagtacttcaagc
agcactagtagtggaagtagttccagcactggcagcactagcagtcggagtagttccagc
agcagcagcacaagtggaagtactagcagggacagtagcagcagtagctctacaagtagt
gaaagtagaagtcggagcagaggaagaggtcataacagaaacagaaaacgcaggaggagt
gcagaaaggaagcgaagggatgcttcaggagtagatagaagtcacaagtcctcgaaaggt
gggagtagagatgcaaaaagttcgaaggataaaagttcaagatctgaccgaaagagatct
atatcagaaagtagtcggtcaggcaggagaacttcacggagtgaaagagaccgtaaatca
gacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
