Meleagris gallopavo (turkey): 100540267
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Entry
100540267 CDS
T01523
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100540267 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100540267 (HBS1L)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100540267 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
100540267
NCBI-ProteinID:
XP_010705625
Ensembl:
ENSMGAG00000013065
LinkDB
All DBs
Position
2:54552387..54658010
Genome browser
AA seq
764 aa
AA seq
DB search
MKREITPSLHVCRLVFPKSAFVQTNLFFFNFIDFEDDDVYGQSVEDDYCISPSTAAQFIY
SRRDKPATFAEPLEEEYGYEDTEDTAGCFTPNHQLTEVDRARLSSCLDQMREVLAESVPD
QAMVQAVLDSKFDVQKALDLVLSQDSKRNLKTKDEDAVIVRKTTKGDLLCFPELLTNKNC
FSCAVENVDSSNKPEVGNFTAKTDSACYSLIANDKMLLNVGKTGKSRDSQSARMESEIVP
KITKMTVSGKKQSMGFEVPGMITEENGHVNTPQKGLPIEEASVTPGVLEAVSKPALSSQV
VQVSEEQNTVPTPVKKTSKTKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLL
YLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVIT
LMDAPGHKDFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQL
AVAVNKMDQVNWQQERFQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQSSDL
TKWYQGKCLLEQIDSFKPPQRSVDKPFRLCVADVLKVDQGSGFCVTGKIEAGYIQVGERL
LAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPVKVCTR
FRARILIFNIEIPVTKGFPVLLHYQTVSEPATIRRLLSILHKSTGEVTKKKPKFLSKGQN
ALIELETQRPVAVELYKDFKELGRFMLRYGGSTIAAGVITEIKE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggaaattacaccatcactccacgtttgcagattggtcttccccaagtccgca
tttgtgcaaactaacctttttttttttaacttcatagatttcgaagatgatgatgtgtat
ggccagtccgtagaagatgattattgcatttctccttctacagcagctcagtttatctac
tcaagacgagacaaaccagcaacgtttgctgagccattggaagaggaatatggctatgag
gatacggaagatactgctggttgttttacacccaatcatcagttgactgaagttgataga
gctcgtcttagttcatgccttgatcaaatgagagaagttttggcggagtctgtaccagac
caggcaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttagatctt
gtgctttcacaagacagtaagcgaaatttgaagaccaaggatgaggatgctgtgattgta
agaaagacaacaaaaggagacttactttgttttccagaattacttactaataaaaactgt
ttctcttgtgcagtagaaaatgttgacagctccaacaaaccagaggttggaaatttcaca
gccaaaactgattcggcttgttattccttaattgcaaatgacaaaatgctccttaatgtt
ggaaaaactggaaaatcaagggattcccagtcagccagaatggaatctgaaattgtgccg
aaaattaccaaaatgacagtgtctggaaagaaacagtcgatgggatttgaggttccaggt
atgattactgaagaaaatggccatgttaacacacctcagaaaggactgccaattgaagaa
gccagtgtaactcctggggttcttgaggcagtatcaaaacctgctctttcatcccaagta
gtgcaggtttcagaagagcagaataccgtgcctactccagtaaaaaaaacaagcaagaca
aaaccacaaatagatgtgaaagcagagttggagaagagacaaggaggaaaacaactactt
aatttggtggtaataggacatgttgatgcaggtaaaagtactttaatgggtcacctactc
tacctcttggggaatgtgaacaaaagaactatgcacaaatatgaacaggaatctaagaag
gctggcaaagcttcatttgcatatgcatgggtcttggatgaaactggggaagaaagagaa
aggggagtaacaatggatgtgggtatgaccaaatttgagacgaagactaaagtaattact
ctgatggatgctccaggccacaaagactttattccaaatatgatcacaggagctgcacag
gctgatgtggctattttggttgtggatgccagcagaggagaatttgaagcgggatttgag
acaggtggacaaactcgagaacatggattattagtgcgatctcttggagtcacgcagtta
gctgttgcagtcaataaaatggaccaggtcaattggcaacaagaaagattccaggaaatt
accagtaagcttggccagtttcttaaacaagctggcttcaaggaatctgatgtggcttat
attccaacaagtggtcttggtggtgaaaatctagtcacaagaagtcagtcaagtgacctc
acaaaatggtatcaagggaagtgtttgttagagcaaatcgattctttcaagccaccgcaa
agatcagtggacaaaccgtttagattgtgtgttgctgatgttttaaaggttgaccaagga
tcaggattctgtgtgactggaaaaatagaagctggctatattcaagttggagaacgactt
ctggcaatgcctcccaatgaaacttgcactgcaaaaggaatcacacttcacgatgaaccg
gttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatggatatcatc
aaaatcaatgttggctgtgtattttgtgatcccaaggaacctgttaaagtttgcactcga
ttcagagctcggattctcatcttcaacattgagattccagtcaccaaaggattccctgtg
cttttacactatcaaacagtaagtgaacctgctactattagaagattgttgagcatcctg
cacaaaagcactggtgaagtgacaaagaaaaaacctaagttcctttctaaaggacagaat
gctttaatagaactagaaactcaaaggccagttgctgtagagttgtataaagattttaaa
gagcttgggaggtttatgttacgctacggtggttccactattgctgcaggagttatcaca
gagattaaagaatga
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