Meleagris gallopavo (turkey): 100540949
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Entry
100540949 CDS
T01523
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100540949 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgp03021
]
100540949 (TAF5)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100540949 (TAF5)
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100540949 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
100540949 (TAF5)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100540949 (TAF5)
STAGA complex
100540949 (TAF5)
TFTC complex
100540949 (TAF5)
SAGA complex
100540949 (TAF5)
SLIK complex
100540949 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
WD40_like
RAB3GAP2_N
eIF2A
VPS8_N
VID27
Motif
Other DBs
NCBI-GeneID:
100540949
NCBI-ProteinID:
XP_010713053
Ensembl:
ENSMGAG00000010475
LinkDB
All DBs
Position
8:22951081..22961085
Genome browser
AA seq
645 aa
AA seq
DB search
MAELLATVYLLSVYCSLRQHYNLLYANAFAVGGGVVVEDQPDVSAVLSAYNQQGDPTLYE
EYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYY
QDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQE
HLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGEN
EEGKPKKKKPKRDSVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGP
ECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKAAADLSL
IDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTF
TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRF
HPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLL
WDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTA
TGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttgttagccactgtatatttgctatctgtgtattgctctttgaggcagcat
tacaatctgttatatgctaatgcttttgcagttggaggaggtgttgttgtggaggatcag
ccagatgtgagtgcagtgttgtctgcctacaatcagcagggggacccaacgctgtacgag
gagtactacagcggtttaaaaaacttcattgagtgttccctggactgtcatcgagccgaa
ttgtctcagctgttttatcctctctttgtgcacatgtacttggagttggtctacaatcaa
catgagagtgaagctaagtctttttttgaaaggttccatggggatcaggaatgttattac
caggatgacctccgtgtattatctagcttaaccaaaaaagaacatatgaagggcaatgag
accatgctggatttccgaacaagcaagtttgttctgcgtatttcccgtgactcttaccaa
ctcttgaagaggcatcttcaggaaaagcagaacaaccagatctggaacattgttcaggaa
catctctacattgatatttttgacggaatgcctcgtagtaaacaacagatagatgctatg
gttggaagcttggctggggaggcaaaacgagaggcaaataaagcgaaggtgttctttggc
ttattgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagagaac
gaggaaggaaaaccaaagaagaaaaaacctaaaagagacagtgtagggtcaaaaagtaaa
aaacaagaccctaatgctcctcctcaaaacagaattcctcttcctgaactgaaagactca
gataaactggataaagtgatgaacatgaaggaagctgccagacgtgtgcgtcttgggcca
gagtgcctgccttccatctgtttctacacgttccttaatgcttatcagggtttaactgca
gtggatattacagatgactctagcatgattgtaggaggctttgctgactctacagtcaga
gtgtggtccgtgactccgaaaaagctacgtagtgtgaaagcagcagcagacctcagtctg
attgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaactgcaagtgag
ttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgatagg
aactacctgttgtcctgttctgaggatggtactgtcagattgtggagcctccaaacattc
acatgtctggtgggatataaaggacacaactatccagtatgggatacacaattctctcct
tacggatattactttgtgtcagggggacacgacagagtggctagactgtgggcgacagat
cattaccagcctttacggatatttgctggccaccttgcagatgtgacatgtactcgattt
caccctaactccaactatattgccactggctcagcagacaggactgtacggctctgggat
gttttaaatggaaattgtgtaagaatattcactggacataagggtccgattcattcgttg
gcattttctcctaatggacgattcctggctactggagcaacagatggcagagttctgctg
tgggatattggacatggcttgatggtcggagaactgaaagggcacactgacactatctat
gcgctccgattcagtagagatggggagattttagcatcaggttcaatggataacacagtt
cggctgtgggatgcagtgaaagcatttgaagatttagaaacagatgactttactacagcc
actggacacataaacttgcctgaaaactcacaggacttgttactaggtacatacatgacc
aaatcaactccagttgtacatcttcattttacacgcaggaacttgctgctagctgcagga
gcctacagttcacagtag
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