Meleagris gallopavo (turkey): 100541005
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Entry
100541005 CDS
T01523
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04382
Cornified envelope formation
mgp04510
Focal adhesion
mgp04512
ECM-receptor interaction
mgp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100541005 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100541005 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100541005 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100541005 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgp04147
]
100541005 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
mgp00536
]
100541005 (COL4A6)
Exosome [BR:
mgp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100541005 (COL4A6)
Glycosaminoglycan binding proteins [BR:
mgp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100541005 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100541005
NCBI-ProteinID:
XP_031410596
Ensembl:
ENSMGAG00000006631
LinkDB
All DBs
Position
9:13880163..13966850
Genome browser
AA seq
1707 aa
AA seq
DB search
MTPHGMKEERKQAVNKLSGFNYMLIEQQGIEEEGGKKSYSGPCGGRDCSAGCKCFPEKGA
RGRPGPIGIQGPIGAPGFTGPEGLPGAKGERGAMGPPGPAGHKGNKGSMGVPGFQGINGI
PGHPGQSGPRGPPGLDGCNGTIGSPGVPGTDGFPGIPGLPGRPGPKGLKGEPVFAQGSLK
GMKGENGLPGLDGISGSKGFPGPTGSAGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKG
EKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGLPGDKGLPGLPGFGGVGEKG
EKGVPGLPGGRGLLGLDGSNGIPGRKGRPGIPGYPGLDGVEGTKGEVGDIGPPGPPIIVD
KEGVVISGAPGDPGNPGIPGPPGDEGSSGLPGFPGAPGFPGLERDGMGPGGSPGIPGVKG
EMGEPGRATVGSPGAPGRDGLPGLPGAPGLPGSSRPSFLPDAILDGRTGVPGEPGQRGLP
GVLGPKGYKGDAGDCACDGGITRAGLKGISGPQGPPGSRGVPGIKGVSGDPGTVGAPGLR
GPLASAGQQGLPGLKGEKGDSSYATGRGAPGDRGATAPIGPSGFPGTPGRDGLPGLPGPP
GPPGDGGLGFPGEKGLPGLPGSKGRPGEIGSPGIGYPGPAGLRGPPGDPGMDGFPGQAGL
PGPPGITLPCIVPGAYGPPGTPGLPGLPGPKGSKGFPGILGQPGLHGSKGQPGSPGIISL
QGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGASGLAGTKGAPGDVFGAESGAQGERGRP
GLSGDKGLEGDLGFPGPKGLDGRPGLLGIKGELGNPGYSGVPGLRGPPGPGGPLGIKGKP
GPLGSAGLAGAPGCQGLPGVKGLTGDVGPQGPAGMKGFPGLDGAPGPPGERGFLGPPGPF
GQDGRPGFFGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTVGEKGSPGVLGLQGQK
GDRGDVGPPGLPVLGAQEQALQLKGDKGDPGLAGLGGFPGPRGDKGFPGSRGQPGLPGPV
GSASRERGFHGDQGLPGPSGQLGLPGQKGTRGIIGFPGMPGERGSDGITGILGFPGPIGL
PGPKGDQGESAGVPGTAGVKGERGDPGFPGERGREGLKGESGYPGSTGVNGIKGGPGDLG
QEGPTGIPGNAGLRGISGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKG
SPGTPGLSEVGLKGPAGLPGLKGEEGSPGLGRGAVGFPGPKGSSGDMGPPGPVGLPGLPG
TPGVSLPSDIRGRPGDAGHPGLDGSSGLPGPPGPRGPPGPAFDQGDTGNPGFPGVPGLQG
GKGDVGPAGPIGLPGVSGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGQPG
APGITPQAEEITAPAGLPGLPGIDGVPGFDGDPGFQGPVGKPGAKGLPGRSGLKGRDGLP
GSPGIAGDPGPLGAPGPQGFEGAAGKPGALGLPGMPGRSVGVGYTLVKHSQSDQIPPCPI
GMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYW
LSTTAPIPMMPVNSNQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPVGWRSLWIGYSFL
MHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFV
GAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgactccccatggaatgaaggaagaaagaaaacaggctgtaaataaactgtctggcttt
aactacatgctcattgagcagcagggtattgaggaagaaggtggaaagaagtcttacagc
gggccatgtggaggacgcgactgcagtgctggatgcaaatgtttcccagagaagggtgcg
aggggtcgaccaggaccaattgggattcagggaccgataggtgctcctggatttactggt
ccagaaggtttgccaggagcaaaaggtgagagaggagcaatgggcccccctggaccagct
ggacacaaaggcaacaagggttcaatgggagttccaggatttcaaggcatcaatgggatc
ccaggtcaccctggccagtctggacccaggggtccacctggcctcgatggctgcaatgga
accattgggagtcctggtgttcctgggacagatggatttcctggcataccagggctgccg
ggtcgtcctggcccaaaaggtcttaaaggagaacctgtttttgctcaaggcagcctgaaa
ggaatgaagggagaaaatggtcttcctggcttggatggtatttctggctccaaaggtttt
ccaggtccaacaggttctgcaggccctataggattaccaggtttgcaaggtccagtgggt
cctcctgggccaccaggtccaaaaggtaatatgggattaggctttcaaggagagaaagga
gaaaaaggtgatgtaggactgcctggccctccgggtccccctccatcgactggaatactg
gaattcatggggttcccgaaggggaagcaaggagaaaagggtgagccaggccctcaagga
ttgcctggagacaaaggattgcctggactgccgggctttggcggtgttggagaaaaagga
gaaaaaggtgtgcctggtttgccaggtggcaggggtcttttggggctggatggatccaat
ggcattccagggagaaagggtcgtccaggtattccaggttatccaggactggatggagtt
gaaggcacaaagggtgaagtaggtgacattggtcccccaggccctcctattattgttgac
aaggaaggtgtagtaatttcaggtgccccaggtgaccctggaaacccaggaatacctggt
cctccaggagatgaagggagcagtggcctaccaggctttccaggagctccagggtttcca
ggcctggagagagatggaatgggccctggagggtctccaggtattcctggtgtgaagggt
gaaatgggagaaccaggaagagcaacagttggatcaccaggcgctccaggaagagatggt
ttacctggtctgccaggagcaccaggattgcctgggtcatcacgcccttcatttctccca
gatgcgatcctggatggaaggactggtgtcccaggggaacctggacaaagagggcttcca
ggagttttgggtccaaagggttacaaaggagatgcaggtgattgtgcttgtgatggagga
attacaagagcaggtctaaaaggcatctcaggtccacagggtccaccaggaagtcgtggt
gtgcctgggattaaaggtgtcagtggagacccaggcactgtgggtgcaccaggactgcga
ggccctctggcttcagctggccagcaaggtcttccaggccttaagggagaaaaaggtgat
tcatcctatgcaacaggcagaggtgctcctggggaccgtggtgccactgcacccatagga
ccatcaggcttcccaggaactcctggcagggatggacttccaggtttgccaggcccacca
ggtccaccaggtgatggtgggctaggtttccctggtgaaaaaggtctaccaggattacct
ggctccaaaggccgtccgggagagatcggttctcctggcattgggtatcccggccctgct
ggacttcgtgggccaccaggtgacccagggatggatggttttccaggacaagcgggtctg
ccaggccctccaggtatcaccttgccctgcatagttcctggagcatatggtcctcctggg
actcccggccttccagggttgccaggtcccaaaggcagcaaaggctttcctggcattctg
gggcaacctggattacatggatctaaaggacagccaggatctccaggaataattagcttg
caaggggaacctggttttcctggacctcgaggagagcaaggatcacaaggacttcccgga
ttggatgggacagacggtttgcctgggaagatgggtgcttcaggcttagctggaactaag
ggagctcctggagatgtatttggtgctgagagtggagctcagggagagcgtggccgacct
gggctctcaggggataaaggacttgaaggagatcttgggtttccaggaccaaaagggctg
gatgggagaccaggcctcctaggtattaaaggcgagctgggtaatccaggatattcaggt
gtccccggattgcggggacctcctggtcctggaggtcctttgggcatcaagggaaaacca
ggaccactgggatcagctggccttgcaggagcaccaggctgtcaaggacttcctggagtc
aaaggattgactggggatgtaggtcctcaaggccctgctggtatgaaaggcttcccaggt
cttgatggtgctccaggacctcctggggaaagaggattcttaggaccacctggacctttt
ggtcaagatggacgtccaggtttttttggaccaaaaggtgaaaaggggtcttctggcctg
cttggtttcccaggcatgccaggcctgcctggtgtccccggggtcaatgggtttaaagga
actcctggcacagtgggagaaaaaggaagccctggagttctgggtcttcaaggtcaaaaa
ggtgacagaggtgatgtaggtccacccggtcttcctgttcttggggctcaagagcaggca
ctgcaattgaaaggagacaaaggagatcctggattagctggacttggaggattcccagga
cccagaggtgataaaggattcccaggaagccgtggacagcctggtcttcctggacctgtt
gggtcagcaagcagagagagaggttttcatggtgaccaaggcctccctggtccatctgga
cagcttgggctgccaggacagaagggcacacgtggtataataggatttccaggaatgcca
ggagagaggggttcagatggtatcacaggaatacttggattcccaggacctattggcctc
cctggtccaaagggtgaccagggagagtctgctggtgttcctggcactgctggagttaaa
ggagagcgaggggacccaggattcccaggagagagagggagagaaggactcaagggtgaa
tcaggctacccaggaagcactggagtgaacgggattaaaggtggcccaggagatcttggc
caagaaggaccaacaggaatccctggaaatgctggactaagagggatctctgggccacca
gggcctccaggacagccaggatctgttggattcccaggagctcgtggaacagcaggaccg
aaagggttccatggatttccaggtttgaatggtctgaatggcttgccaggcacaaaaggg
tctcctggaacaccaggtctgagtgaagttggactgaaaggccctgcgggtctccctggt
ctgaagggtgaggaaggttctccaggcctgggtagaggagctgtaggattcccagggcca
aaaggctcatcaggagacatgggtcccccaggtcctgtgggactgcctggcttgccagga
actcctggagtttctcttccttctgatatacgtgggagacctggggatgctggccatcca
ggacttgatgggagttcaggtcttccaggtcctccgggaccacgagggccccctggacca
gcttttgaccaaggtgacacaggcaatccaggtttccctggtgttcctggcttgcaaggt
ggtaagggtgatgtaggacctgctggtcccattggactccctggcgtatctggattcaaa
ggtgtcagaggcgagcctggtcttatggggatgccaggtaaagatgggcctccaggggat
cctggttaccctggactgaaaggtgaaatgggacgccgaggtctccctggccaaccaggg
gctccaggtataaccccacaggcagaagaaatcacagcccctgcaggcttaccgggtctg
ccagggattgatggtgttcctggctttgatggagatcctggattccagggcccggttgga
aagccaggtgcaaagggcctgccaggcagatctggtttgaaaggacgcgatggtttacct
ggatcacctggcatagctggtgacccgggacctttgggtgccccaggacctcagggattt
gaaggtgccgctggaaagccaggcgcgcttggcttgccgggaatgcctggtcggagcgtg
ggtgtcgggtacaccttagtgaagcacagccagtcagaccaaatcccaccttgtcccatt
ggcatgaacaagctctgggatggctacagcttgttgtacgtggaggggcaggaaaaatca
cacaaccaggatctcggttttgctggctcttgtttgccccgcttcagcactatgcctttt
atttactgcaacatcaatgaagtgtgctactacgccagccgaaacgacaagtcctactgg
ctgtccaccactgctcccatccccatgatgccagtgaacagcaatcagatcccacagtac
atcagtcgttgctccgtgtgcgaagcaccatcccaggctgtggctgtgcacagccaggat
atcaccatcccacagtgtcctgttggttggcgcagcctctggataggatactccttccta
atgcacacagcagctggtgcagagggtggaggtcagtcccttgtctcacctggttcttgc
ctggaggatttccgtgctacgcccttcattgaatgcaatggtgccagaggaacatgccac
tactttgcaaacaaatacagcttctggctgaccactgttgagcagtcgcagcagtttgtt
ggtgctcctccctccgaaactctgaaagcaggacagcttcggacgagggtcagccgctgc
caagtgtgcatgaagaacttgtaa
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integrated database retrieval system
