Meleagris gallopavo (turkey): 100541005
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Entry
100541005 CDS
T01523
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04510
Focal adhesion
mgp04512
ECM-receptor interaction
mgp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100541005 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100541005 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100541005 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgp04147
]
100541005 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
mgp00536
]
100541005 (COL4A6)
Exosome [BR:
mgp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100541005 (COL4A6)
Glycosaminoglycan binding proteins [BR:
mgp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100541005 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100541005
NCBI-ProteinID:
XP_031410596
Ensembl:
ENSMGAG00000006631
LinkDB
All DBs
Position
9:13880163..13966850
Genome browser
AA seq
1707 aa
AA seq
DB search
MTPHGMKEERKQAVNKLSGFNYMLIEQQGIEEEGGKKSYSGPCGGRDCSAGCKCFPEKGA
RGRPGPIGIQGPIGAPGFTGPEGLPGAKGERGAMGPPGPAGHKGNKGSMGVPGFQGINGI
PGHPGQSGPRGPPGLDGCNGTIGSPGVPGTDGFPGIPGLPGRPGPKGLKGEPVFAQGSLK
GMKGENGLPGLDGISGSKGFPGPTGSAGPIGLPGLQGPVGPPGPPGPKGNMGLGFQGEKG
EKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGLPGDKGLPGLPGFGGVGEKG
EKGVPGLPGGRGLLGLDGSNGIPGRKGRPGIPGYPGLDGVEGTKGEVGDIGPPGPPIIVD
KEGVVISGAPGDPGNPGIPGPPGDEGSSGLPGFPGAPGFPGLERDGMGPGGSPGIPGVKG
EMGEPGRATVGSPGAPGRDGLPGLPGAPGLPGSSRPSFLPDAILDGRTGVPGEPGQRGLP
GVLGPKGYKGDAGDCACDGGITRAGLKGISGPQGPPGSRGVPGIKGVSGDPGTVGAPGLR
GPLASAGQQGLPGLKGEKGDSSYATGRGAPGDRGATAPIGPSGFPGTPGRDGLPGLPGPP
GPPGDGGLGFPGEKGLPGLPGSKGRPGEIGSPGIGYPGPAGLRGPPGDPGMDGFPGQAGL
PGPPGITLPCIVPGAYGPPGTPGLPGLPGPKGSKGFPGILGQPGLHGSKGQPGSPGIISL
QGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGASGLAGTKGAPGDVFGAESGAQGERGRP
GLSGDKGLEGDLGFPGPKGLDGRPGLLGIKGELGNPGYSGVPGLRGPPGPGGPLGIKGKP
GPLGSAGLAGAPGCQGLPGVKGLTGDVGPQGPAGMKGFPGLDGAPGPPGERGFLGPPGPF
GQDGRPGFFGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTVGEKGSPGVLGLQGQK
GDRGDVGPPGLPVLGAQEQALQLKGDKGDPGLAGLGGFPGPRGDKGFPGSRGQPGLPGPV
GSASRERGFHGDQGLPGPSGQLGLPGQKGTRGIIGFPGMPGERGSDGITGILGFPGPIGL
PGPKGDQGESAGVPGTAGVKGERGDPGFPGERGREGLKGESGYPGSTGVNGIKGGPGDLG
QEGPTGIPGNAGLRGISGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKG
SPGTPGLSEVGLKGPAGLPGLKGEEGSPGLGRGAVGFPGPKGSSGDMGPPGPVGLPGLPG
TPGVSLPSDIRGRPGDAGHPGLDGSSGLPGPPGPRGPPGPAFDQGDTGNPGFPGVPGLQG
GKGDVGPAGPIGLPGVSGFKGVRGEPGLMGMPGKDGPPGDPGYPGLKGEMGRRGLPGQPG
APGITPQAEEITAPAGLPGLPGIDGVPGFDGDPGFQGPVGKPGAKGLPGRSGLKGRDGLP
GSPGIAGDPGPLGAPGPQGFEGAAGKPGALGLPGMPGRSVGVGYTLVKHSQSDQIPPCPI
GMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYW
LSTTAPIPMMPVNSNQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPVGWRSLWIGYSFL
MHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFV
GAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgactccccatggaatgaaggaagaaagaaaacaggctgtaaataaactgtctggcttt
aactacatgctcattgagcagcagggtattgaggaagaaggtggaaagaagtcttacagc
gggccatgtggaggacgcgactgcagtgctggatgcaaatgtttcccagagaagggtgcg
aggggtcgaccaggaccaattgggattcagggaccgataggtgctcctggatttactggt
ccagaaggtttgccaggagcaaaaggtgagagaggagcaatgggcccccctggaccagct
ggacacaaaggcaacaagggttcaatgggagttccaggatttcaaggcatcaatgggatc
ccaggtcaccctggccagtctggacccaggggtccacctggcctcgatggctgcaatgga
accattgggagtcctggtgttcctgggacagatggatttcctggcataccagggctgccg
ggtcgtcctggcccaaaaggtcttaaaggagaacctgtttttgctcaaggcagcctgaaa
ggaatgaagggagaaaatggtcttcctggcttggatggtatttctggctccaaaggtttt
ccaggtccaacaggttctgcaggccctataggattaccaggtttgcaaggtccagtgggt
cctcctgggccaccaggtccaaaaggtaatatgggattaggctttcaaggagagaaagga
gaaaaaggtgatgtaggactgcctggccctccgggtccccctccatcgactggaatactg
gaattcatggggttcccgaaggggaagcaaggagaaaagggtgagccaggccctcaagga
ttgcctggagacaaaggattgcctggactgccgggctttggcggtgttggagaaaaagga
gaaaaaggtgtgcctggtttgccaggtggcaggggtcttttggggctggatggatccaat
ggcattccagggagaaagggtcgtccaggtattccaggttatccaggactggatggagtt
gaaggcacaaagggtgaagtaggtgacattggtcccccaggccctcctattattgttgac
aaggaaggtgtagtaatttcaggtgccccaggtgaccctggaaacccaggaatacctggt
cctccaggagatgaagggagcagtggcctaccaggctttccaggagctccagggtttcca
ggcctggagagagatggaatgggccctggagggtctccaggtattcctggtgtgaagggt
gaaatgggagaaccaggaagagcaacagttggatcaccaggcgctccaggaagagatggt
ttacctggtctgccaggagcaccaggattgcctgggtcatcacgcccttcatttctccca
gatgcgatcctggatggaaggactggtgtcccaggggaacctggacaaagagggcttcca
ggagttttgggtccaaagggttacaaaggagatgcaggtgattgtgcttgtgatggagga
attacaagagcaggtctaaaaggcatctcaggtccacagggtccaccaggaagtcgtggt
gtgcctgggattaaaggtgtcagtggagacccaggcactgtgggtgcaccaggactgcga
ggccctctggcttcagctggccagcaaggtcttccaggccttaagggagaaaaaggtgat
tcatcctatgcaacaggcagaggtgctcctggggaccgtggtgccactgcacccatagga
ccatcaggcttcccaggaactcctggcagggatggacttccaggtttgccaggcccacca
ggtccaccaggtgatggtgggctaggtttccctggtgaaaaaggtctaccaggattacct
ggctccaaaggccgtccgggagagatcggttctcctggcattgggtatcccggccctgct
ggacttcgtgggccaccaggtgacccagggatggatggttttccaggacaagcgggtctg
ccaggccctccaggtatcaccttgccctgcatagttcctggagcatatggtcctcctggg
actcccggccttccagggttgccaggtcccaaaggcagcaaaggctttcctggcattctg
gggcaacctggattacatggatctaaaggacagccaggatctccaggaataattagcttg
caaggggaacctggttttcctggacctcgaggagagcaaggatcacaaggacttcccgga
ttggatgggacagacggtttgcctgggaagatgggtgcttcaggcttagctggaactaag
ggagctcctggagatgtatttggtgctgagagtggagctcagggagagcgtggccgacct
gggctctcaggggataaaggacttgaaggagatcttgggtttccaggaccaaaagggctg
gatgggagaccaggcctcctaggtattaaaggcgagctgggtaatccaggatattcaggt
gtccccggattgcggggacctcctggtcctggaggtcctttgggcatcaagggaaaacca
ggaccactgggatcagctggccttgcaggagcaccaggctgtcaaggacttcctggagtc
aaaggattgactggggatgtaggtcctcaaggccctgctggtatgaaaggcttcccaggt
cttgatggtgctccaggacctcctggggaaagaggattcttaggaccacctggacctttt
ggtcaagatggacgtccaggtttttttggaccaaaaggtgaaaaggggtcttctggcctg
cttggtttcccaggcatgccaggcctgcctggtgtccccggggtcaatgggtttaaagga
actcctggcacagtgggagaaaaaggaagccctggagttctgggtcttcaaggtcaaaaa
ggtgacagaggtgatgtaggtccacccggtcttcctgttcttggggctcaagagcaggca
ctgcaattgaaaggagacaaaggagatcctggattagctggacttggaggattcccagga
cccagaggtgataaaggattcccaggaagccgtggacagcctggtcttcctggacctgtt
gggtcagcaagcagagagagaggttttcatggtgaccaaggcctccctggtccatctgga
cagcttgggctgccaggacagaagggcacacgtggtataataggatttccaggaatgcca
ggagagaggggttcagatggtatcacaggaatacttggattcccaggacctattggcctc
cctggtccaaagggtgaccagggagagtctgctggtgttcctggcactgctggagttaaa
ggagagcgaggggacccaggattcccaggagagagagggagagaaggactcaagggtgaa
tcaggctacccaggaagcactggagtgaacgggattaaaggtggcccaggagatcttggc
caagaaggaccaacaggaatccctggaaatgctggactaagagggatctctgggccacca
gggcctccaggacagccaggatctgttggattcccaggagctcgtggaacagcaggaccg
aaagggttccatggatttccaggtttgaatggtctgaatggcttgccaggcacaaaaggg
tctcctggaacaccaggtctgagtgaagttggactgaaaggccctgcgggtctccctggt
ctgaagggtgaggaaggttctccaggcctgggtagaggagctgtaggattcccagggcca
aaaggctcatcaggagacatgggtcccccaggtcctgtgggactgcctggcttgccagga
actcctggagtttctcttccttctgatatacgtgggagacctggggatgctggccatcca
ggacttgatgggagttcaggtcttccaggtcctccgggaccacgagggccccctggacca
gcttttgaccaaggtgacacaggcaatccaggtttccctggtgttcctggcttgcaaggt
ggtaagggtgatgtaggacctgctggtcccattggactccctggcgtatctggattcaaa
ggtgtcagaggcgagcctggtcttatggggatgccaggtaaagatgggcctccaggggat
cctggttaccctggactgaaaggtgaaatgggacgccgaggtctccctggccaaccaggg
gctccaggtataaccccacaggcagaagaaatcacagcccctgcaggcttaccgggtctg
ccagggattgatggtgttcctggctttgatggagatcctggattccagggcccggttgga
aagccaggtgcaaagggcctgccaggcagatctggtttgaaaggacgcgatggtttacct
ggatcacctggcatagctggtgacccgggacctttgggtgccccaggacctcagggattt
gaaggtgccgctggaaagccaggcgcgcttggcttgccgggaatgcctggtcggagcgtg
ggtgtcgggtacaccttagtgaagcacagccagtcagaccaaatcccaccttgtcccatt
ggcatgaacaagctctgggatggctacagcttgttgtacgtggaggggcaggaaaaatca
cacaaccaggatctcggttttgctggctcttgtttgccccgcttcagcactatgcctttt
atttactgcaacatcaatgaagtgtgctactacgccagccgaaacgacaagtcctactgg
ctgtccaccactgctcccatccccatgatgccagtgaacagcaatcagatcccacagtac
atcagtcgttgctccgtgtgcgaagcaccatcccaggctgtggctgtgcacagccaggat
atcaccatcccacagtgtcctgttggttggcgcagcctctggataggatactccttccta
atgcacacagcagctggtgcagagggtggaggtcagtcccttgtctcacctggttcttgc
ctggaggatttccgtgctacgcccttcattgaatgcaatggtgccagaggaacatgccac
tactttgcaaacaaatacagcttctggctgaccactgttgagcagtcgcagcagtttgtt
ggtgctcctccctccgaaactctgaaagcaggacagcttcggacgagggtcagccgctgc
caagtgtgcatgaagaacttgtaa
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integrated database retrieval system
