KEGG   Meleagris gallopavo (turkey): 100541123
Entry
100541123         CDS       T01523                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
mgp  Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mgp03036]
    100541123 (KDM4B)
Enzymes [BR:mgp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100541123 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100541123 (KDM4B)
Chromosome and associated proteins [BR:mgp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100541123 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 100541123
NCBI-ProteinID: XP_031413015
Ensembl: ENSMGAG00000005999
LinkDB
Position
30:complement(4410343..4482319)
AA seq 1107 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDTDVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDIAVLDHMKPTALTSPELDAWNE
TKADLKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEDRSKVVEGEGDSKVKARPPKVKGERKKKHLFHQHQHHLQTSQPLQQQQQQ
QLPLPPAVQQQQAEEEAAAAPAASTADKSLLTTPLNIVQPSEAPVEEDDFKPRPIIPMLY
VVPRTKKVVFDKEHMSCQQAFEQFATQKSPGWREQTVSLEIPVKEEESAEAENTEIATEV
SDLQTAAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSDPEAL
KSLLSLQWKNKAPNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQMDKEAVPVSAGETT
SFVHLSKCGQKTKPLIPEMCFTSSGENIEPLPSNSYIGEDGTSSLISCAKCCLQVHASCY
GIRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWVHIICAIAVPEARFLNV
IERHPVDIAAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVPMEP
DDWPYVVSITCFKHKAANQNIQFRREVTLGQTVITKNRNGLYYRCKVIGMTTQTFYEVNF
DDGSYSDNVYPESIISRDCIQLGPPPEGEMVQLQWTDGIIYKAKFIAAQINHIYQVEFED
GSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEMRAAKRPRLGNARNPEEY
GQNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3324 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccacagaaccctggctgtaagattatgacctttcgtccc
actcttgaggagtttcgggactttgggaaatacgttgcttacattgaatcacaaggagct
caccgagcagggcttgccaaggtgattcctcccaaggagtggaagccccgaaaaacctat
gatgacatagatgatatggttatcccagctcccattcagcaggtggttactggccagtca
ggattattcacccagtacaatatacagaagaaacccatgactgtgggagagtaccggcgt
ctggctaatagtgagaaatattgtacaccacgccatcaagattttgaagacttggagcgc
aagtactggaagaatctcacttttgtctcaccaatttatggggctgatatcagtggctct
ctgtatgacacagatgtggaagaatggaatattggcaatctgaacaccctgttagacatg
gtggaacatgagtgtggtattattatagaaggtgtaaacactccctacctctattttggg
atgtggaagacaacgtttgcttggcatacagaagacatggatctctacagtatcaactac
ttgcattttggagagccaaaatcctggtatgccatacctccagaacatggcaagagattg
gaacgcttggcaaaaggattttttcctggaagctctcagggatgtgatgctttcctccgt
cacaagatgaccctcatttcaccctcaatcttgaagaagtacggcattccttttgaccgg
atcacacaggaagctggagagtttatgattacatttccttacggttaccatgctggcttc
aatcatggcttcaactgtgctgagtcaaccaactttgccacattgcgttggattgactac
ggaaaaatggcaacccagtgtacgtgccgcaaagacatggtgaagatttccatggatgtc
tttgtgagggttctgcagccagaacgttatgatttatggaaacaaggaaaagacattgct
gtcctggaccatatgaaacccacagctctgactagcccagaactagatgcctggaatgag
acgaaggcagacttgaaggccaaattgcttcgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaagaagtcaaccaagaagacataaaacagaggatcagaag
tctctgggggatgtcatggctattgaaactgccttggaagatgtgaaagtgaaagaggaa
ctgaaaagagggccagacctagaggaagaagacagaagcaaagtggttgagggagaaggt
gacagcaaagtaaaggctcgtcctccaaaagtaaaaggtgagaggaagaagaagcatctt
ttccatcagcaccagcaccacctgcaaacatctcagcctctgcagcagcagcagcagcaa
cagctgccactgccaccagcagtgcagcagcagcaggcagaggaggaggcagcagcagca
cctgcagcatccacagcagacaagagcttgctgaccacccccctcaacattgtccagccc
tcagaggcaccagttgaggaagatgactttaagcctcgtcctatcattcccatgctttat
gtggttccacggaccaaaaaagtggtgtttgacaaagagcacatgtcctgccagcaggca
tttgagcagtttgcgactcagaagagtcctggttggcgggagcagacagtctctttggaa
atccctgtaaaagaggaggagagtgcagaagcagaaaatacagagattgctacagaggtc
agtgatttacagactgctgctttctcaaaaatgaagatggagataaagaaaagtcgtcgt
cacccattaggcaaaccgccaacccgctccccattgtcagtggttaaacaggagacctcg
agtgatgaggaaacatttccattttctggggaggaagatatgagtgacccagaggctttg
aaatctttactttctctccagtggaagaataaagcacctaatttcccagctgaaagaaaa
ttcaatgcagctgctgccctgagtgagccatactgtgctgtctgtaccctcttttaccca
tataaccagtccttacagatggataaagaagctgtcccagtctctgcaggggagaccacc
tcttttgtccacctttctaagtgcggacagaagacgaagcctctgatcccagagatgtgc
tttacctcaagtggagaaaacatagagcctcttccttcaaattcatatattggagaagat
ggaaccagttccttgatatcctgtgccaaatgctgcctgcaggttcatgctagctgttat
ggaatacgtccagatttggtgaatgaaagctggtcttgctcacgatgctcagccaatgca
tgggcagcggaatgttgcctgtgtaatctcaggggaggagctcttcagatgaccactgat
gggcggtgggtccatataatttgtgctattgctgtccctgaggcccgttttctcaatgtc
atagagcgtcatcctgtggatatcgctgctattccagagcaaagatggaaactgaaatgt
gtgtactgtcgaaagcggatgaagaaggtgtctggtgcctgcatccagtgctcctacgag
cactgctccacttccttccacgtcacctgcgcgcatgctgctggcgtgcccatggagccc
gatgactggccctacgtcgtgtccatcacttgcttcaaacacaaagcagccaaccagaac
attcaatttcgaagggaggtgacccttgggcagactgtgatcacaaagaaccggaatgga
ctctactacagatgtaaagtgatcggcatgacgacacagactttctatgaagtaaacttt
gatgatgggtcatacagtgacaacgtttacccagaaagcattattagcagagactgcatc
caactgggaccccctccagagggtgagatggttcaactgcagtggacagatggaatcatc
tataaggccaagtttattgcagcccagatcaatcatatttatcaggttgaatttgaagat
ggctcccaactaatggtaaagcgtggtgatatttataccttggaggaggagcttccaaag
agagtgaagtctcgcttgtccctcagcactggggcccctcaggaagatgtattttcggga
gatgaaatgagagcagccaagcgtccccggctggggaatgcaaggaatcctgaagagtac
ggacaaaacccagattacttggcctttatggagagcctgttgcagacacagtaccaacct
ggaactcagagcaacatgttttaa

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