Meleagris gallopavo (turkey): 100541253
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Entry
100541253 CDS
T01523
Symbol
PDCD11
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mgp03009
]
100541253 (PDCD11)
Ribosome biogenesis [BR:
mgp03009
]
Eukaryotic type
90S particles
Other 90S particles
100541253 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_Syf1_CNRKL1_N
Spt6_S1
HAT_PRP39_N
OB_RRP5_4th
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
OB_RRP5
TPR_15
TPR_CcmH_CycH
ARM_TT21
ARM_TT21_5th
TPR_12
TPR_16
Motif
Other DBs
NCBI-GeneID:
100541253
NCBI-ProteinID:
XP_010712959
Ensembl:
ENSMGAG00000010482
LinkDB
All DBs
Position
8:22965356..22989164
Genome browser
AA seq
1836 aa
AA seq
DB search
MASMEENFPRGGIQKKPTETTGKKAKPKFEQDNLFDIHHEEQTQKRKRSEGDHRKQKKFK
ADKKAPAKDIAIEPLTIQEICEGMLLLGCIKEVTFFELVISLPNGLTGFVPVTQISDAYS
ELLNEQVTQGELLEDLNSLSDLYSPGMLVRCVVTSVEKSADGRRSIKLSINPKNVNKGLN
ASALTSGMLLSGFVRSVEDHGYLIDIGVRGTHAFLPHQKAQNYIKAVKRGSDLKIGQSLN
CLIEEVKNEGRVVRLSADRSEVAASIATEQQNWTLSNLLPGLVVKAQVQKVAPLGISLTF
LSSFTGIVDFMHVDPEKSTNYSPNQVVKACILSTHPTSKVVHLTLRQAFLCPGGSPNQLS
NDRIGAVVEESTVKAFYKQFGAVFELDDGMLAFARLKHLSKTRKSFKPAAFKAGCKHKCR
IIDYSLMDEMCIVSLKHQIIEARFLRYQDIHTGDVMQGKVLSLKPIGMQVKVTDGIKGLV
PSMHLADVILKQPEKKYNVGDEVRCRVLECNPEEKKLFLTLKKTLVQSKLPVLSSYEDAE
PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFHDGQVVKVMVLKCE
PQQERLLLSFRLSSKPVPEGRTECTPKKKQQVKYQIGEMVDVKVLKKNENGLEVSILEDG
DDVIAWLPTGHLSDFVANSKLLWHCLQEGDVLPRVMCLSDKGDRIILCRKSAVISAVQEE
QVVRSFSEIQPGVLLTGYVRKVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQ
TVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFSLLNQYFKEMEEIKNLLRRREESGL
AQCLSELVPGKELQLVVQDVMEDGSALFSGSCVRGWTVTATHYHLGGKKVVPGEKAKGLV
LHVDAITSKVYVSLREELLKKEPSKXRLTKNSQHPAIVQHIAEEFAIVSLLDSGRLAAVP
IASHFNDTFRFDSEKMKVGQRIYATLKTVKANDLGVVLAVQDPTKKNAFVRDRKESETAL
EETLAAAVKHSLSLGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASQILDEVPIYSFPTYT
LKAGQKVTARVIGGRDVNTHRYLPITHPHFTRSVPELSIRPSEIEGKVETMRDDTCEKLG
PYNVGQTVTCFVRKYNILKNWLEVEVAPDVRGRVPRLLLSLNTKVLKHPEKNFKNGQALS
ATVTGTDATETNLFLSLTGIQSLEPGTITVGMVAKMIPHIGLTITLPGGKTGKVSIFHLS
DKYTESPLSDFKIGKVVRCYILSNENGKIQLSLRQSRLNPKNSSKVEDAEITSIKDVKKG
QLLRGYVKSVTPSGVFFGLSASLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLDV
NKNENHVELSLLPEDTEMPSVLPESLGLPRYGAEEEKREEDKEEKKEKVKMKRKQRRVNS
ESEQEAKPKKRKLSPSDENDSGIEVYYREEEDGDQEGEAAEKKSRIRKCGEVSRLQVSTG
FTWDEDINAVEVPVLNQKEESSESEEEEENLQSKKKQTKKEKELEKQKKEKELCKLEAAL
MDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREEQ
EKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYASSEKYKQAEELYH
TMLRRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFRFG
DPEHAKALFESTLNSYPKRTDIWSIYMDIMIKQGSQKEVRDIFERVIHLNLAPKKMKFFF
KRYLDYEKKYGTTETVMAVKTAALEYVEAKSSLADT
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatggaagaaaactttcctcgagggggaatccagaagaagcctacagagaca
acaggaaaaaaagcaaaaccaaagtttgagcaggataacttgtttgatattcaccatgaa
gaacaaacgcagaaaagaaaaaggagcgaaggggatcataggaagcagaagaagttcaag
gcagacaaaaaggctcctgctaaagacattgctattgaaccactcacaattcaggagatc
tgtgaggggatgctgctccttggttgtataaaagaggtcactttctttgagcttgtcatc
agcttgcccaacggacttacaggatttgtgccagtcacgcagatcagcgatgcctacagt
gaattgttgaacgagcaagtgacccaaggggagctgctggaggatttgaattctctctca
gacctgtactctccagggatgttggtcagatgcgttgtgaccagtgttgagaaaagtgcc
gatggacgtcggagtatcaagttgtccatcaaccctaaaaatgtcaacaaaggtctgaat
gcatcagcactaacatcaggcatgctgctctctggatttgtgcgtagtgtagaagaccat
ggctacctcattgatattggagtcagagggactcatgctttccttcctcatcagaaagcc
caaaattacatcaaagcagtcaagagagggtcggacttgaaaatagggcaaagcctgaac
tgcctcattgaggaagtaaagaatgagggaagagtggtccgtttgtctgctgatcgatca
gaggttgctgcatccattgcaacagagcaacagaactggacactctctaatctactgcca
gggctggtggtaaaagctcaagtgcagaaggtggctccactgggtatcagtctgaccttt
ctgtcttccttcactggtattgtggatttcatgcacgtggacccagagaaatccacaaat
tattctccaaatcaagtggtgaaggcttgcatcctctctacccaccccacctccaaggtg
gtgcatctcactctgcggcaggctttcctctgccctggaggatccccaaaccagctctcc
aacgatcgcataggggcggtagtggaagagtctacagtgaaggctttctacaagcagttt
ggtgctgtctttgagcttgatgatggcatgcttgcatttgcacggttgaaacatctatca
aaaaccagaaaatcttttaaacctgcagcgttcaaagctggatgtaagcataagtgtcgg
atcattgactacagcctgatggatgagatgtgcatagtatctctgaagcatcagattatt
gaagctcgtttcctgcgataccaagatattcacacgggggatgtcatgcagggcaaagta
ttgtctctgaaacccattgggatgcaggtgaaagttactgatggaattaaagggcttgtg
ccatccatgcatcttgctgatgtgatcctgaagcagcctgagaagaagtacaacgtagga
gatgaagtcaggtgtcgggtgttagagtgcaatcctgaagaaaagaagctgttccttact
ttaaagaaaactcttgtgcaatcaaagcttccagtcctctccagttatgaagatgcagaa
ccaggtctgatcacacatggctttgtggtgtgtgcaagggaatttggctgcattgtgaag
ttctacaatgatgtcaaaggtctggtacccaagaatgagctgagctcagagcccatatct
tgtccagataaagtcttccatgacggccaggttgttaaagtaatggtcttaaaatgtgag
ccccagcaggaaagactcttgctgtccttcaggttatcaagcaagcctgttcctgaaggc
agaactgagtgtactccaaagaagaaacagcaagtgaaatatcaaataggagagatggtt
gatgtgaaagtcttgaagaagaatgagaatgggctcgaggtttctatcttagaagatgga
gatgatgtgatagcctggcttcctacagggcacctctctgactttgttgctaactctaag
ctcctgtggcattgccttcaagagggagatgtcttgcccagagttatgtgcctgagtgac
aagggggaccgtattatcttgtgcaggaagtctgcagtgatttctgctgtacaggaagag
caagttgtgagaagtttctctgaaatccagcctggggtgctgctgactggttatgtgagg
aaggttatgccctttggagtgtttgtggagttcccttttggtgtgacaggactggcacct
aaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgtggtgggacag
actgtaattgcaaaggtgatgagcatcgatgaggagaagcagcgtgtgctcctcaatctg
aaggtgtcggagtgcagctctggagattcagctgcagagagcttttcactgctgaatcag
tatttcaaggagatggaggaaatcaagaacttgttgaggagaagagaagagtctggcttg
gcccagtgccttagtgagctggtgcctgggaaggagctgcagctggttgtgcaggatgtg
atggaggacggctcagcactcttcagtggcagctgtgtcagaggctggactgtaacagct
actcactaccacttgggaggcaaaaaagttgttcctggtgagaaagcaaagggactggtt
cttcatgtggatgccatcacatccaaggtgtatgtttctcttcgagaagaactcttaaaa
aaagagccaagcaagtagcggctcacaaagaactcccagcaccctgccatcgtgcagcac
atagcagaagagtttgccatcgtgtctctgttggactcaggccggctggcagctgtcccc
atagcctctcacttcaatgataccttccgctttgactcagaaaaaatgaaggtgggacag
agaatctatgcaaccttaaaaacggtgaaggcaaatgatcttggagtcgtgttagcagta
caagacccaacgaagaagaatgcttttgtaagggaccggaaggagtctgagacagcttta
gaggagacacttgctgctgctgtgaaacactctctttccctgggtgatattgttactggt
actgttaaatctgtcaaaccaacgcacgtcacagttgctattgatgacaaattgacgggt
tcaatccatgcatcccagattctggatgaagtgcccatatactcttttccaacgtacact
ctgaaagctggacagaaggtgactgcccgggtcattggaggcagagatgtgaacactcac
aggtacctgcccatcacccatccacacttcacacggtctgttccagagctcagcattcga
ccaagtgaaatagaagggaaagttgaaacaatgagagatgacacctgtgagaaacttgga
ccctacaatgttggacagacagtcacctgttttgtgaggaagtacaatatcctgaaaaac
tggctggaggtagaagtggcccctgatgttcgaggaagagttcctcgtctgctgctgtct
ctgaacaccaaggtcttaaaacatccagaaaagaacttcaaaaatggccaagcgttatct
gctacagtgactggaacagatgccaccgaaacaaacctcttcttgtcgctcacaggaatt
cagtcactggaaccaggtaccatcactgtaggcatggtagcaaaaatgattcctcacatt
ggtttgaccatcactctgccaggtgggaagactggcaaagtcagtatctttcacctaagc
gataagtacacagagagtcctctgagtgacttcaaaattggcaaagttgtcagatgttac
atcctctccaatgagaatggcaaaatccagttatctcttcggcagtccagattaaaccca
aagaacagcagcaaagtggaggatgctgaaataacaagtattaaggatgttaaaaaaggc
cagctattaagaggctatgtcaaatcagttactccgtcaggtgtattctttggcttgtct
gcttctcttctgggccgaatcctgttccagaacgtttccccttactttgtacagaaacac
tccttgtatgagaaatacctgccagagggaaagctgctcactgccaaggtccttgatgta
aataaaaatgaaaatcatgttgagctctctctcctgcctgaggacactgagatgccaagc
gtcttgcctgaatccctaggcttaccacgctatggtgcagaggaagagaaaagagaagaa
gataaggaggagaagaaggaaaaggttaagatgaagagaaaacagagaagagtgaactct
gagagtgagcaggaagcaaagccaaaaaaaaggaagctttctccatcggatgaaaatgac
agtggaattgaagtgtattaccgggaagaagaggatggtgaccaggagggagaggcagct
gagaagaaatctaggataaggaaatgtggtgaagtttccaggctgcaagtttccacaggc
ttcacctgggatgaggacataaatgcagtggaagtgcctgtactgaatcagaaggaagag
agctcggagagtgaggaggaggaggagaatctgcagtctaagaagaaacaaacaaagaag
gagaaggagctggagaagcagaagaaggagaaagagctatgcaaattagaggcagccctg
atggaccccagtcgtcagccccagtcagcagatgattttgaccgtctggtgctgagcagt
cccaacagctccatcctctggctgcagtatatggctttccacctccaggctactgagatt
gagaaggcaagagctgtggcagagagagcactcaaaacaatctgtttcagggaagaacaa
gagaagctgaatgtctgggttgctcttctaaacttggagaacatgtatggcactgaggag
acactgatgaaggtctttgagagagctgttcagtacaatgaacctctgaaagtcttccag
catctgtgtgatatctatgccagttctgagaagtacaagcaagcagaagaattgtaccac
acaatgctgaggcgtttccgtcaggaaaaatcagtgtggctgaagtatgcctctttcctc
ctgaagcaaggccagactgaagctacacacaggcttttggagcgtgctctcaaggctcta
cctaccaaagaacatgtggatgtcatttcaaggtttgcacagttggagttccgttttggt
gacccagaacatgctaaggccctttttgagagcaccctcaacagctacccgaagcgaaca
gatatctggtccatctacatggacatcatgatcaaacagggcagccagaaggaagtacgg
gacatctttgagagggtcatacacctgaacttagcaccaaagaagatgaaattcttcttt
aagcgctacctggattatgaaaagaaatatggtacaacagaaactgtcatggctgttaag
acagcagcactggagtatgtagaggccaagagttccctcgctgacacctaa
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integrated database retrieval system
