Meleagris gallopavo (turkey): 100541846
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Entry
100541846 CDS
T01523
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100541846 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mgp03000
]
100541846 (ARID1A)
03021 Transcription machinery [BR:
mgp03021
]
100541846 (ARID1A)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100541846 (ARID1A)
Transcription factors [BR:
mgp03000
]
Eukaryotic type
Helix-turn-helix
ARID
100541846 (ARID1A)
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100541846 (ARID1A)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100541846 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100541846
NCBI-ProteinID:
XP_010721523
LinkDB
All DBs
Position
25:complement(59492..95365)
Genome browser
AA seq
1895 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYSQQTPSQTPHSQPSYQQQ
QQPQSQAPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQSTAQQHQQNQPPYSQQQSQSPYQ
QQQQQQQQTQQTASSALSQQSSSYPQSQPQQQQPAYSQQRFPPPQELSQESFGSQTSSAP
SMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPA
QSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIM
HPSMNQSSIAQDRGYLQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYG
PQAGQYGPQGGYPRQPNYNALSNANYPSPGMGGSMNPMAAGSQMHGQTGVPPYSGLPPGR
MSHAAMGNRPYGPNMANMPPQVGTGMCPPPGSMNRKAQEAAAAAMHAAANSIQNRPPGYP
NMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLADVKLT
PATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAM
GMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQY
IQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAE
GGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFTDGSDPTFQKRNSMTPNPGYQPSMNT
SDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRP
HYPYGGPYDRVRTEPGMGPEGNLAAGTPQPNIMPSTSESGMYSPSRYPQQQQQQQRHDSY
GNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQGQ
TQQQLPPAQTQQPSQQQAAQPSPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRDRVS
APPGSNAQQNMPPQMMGGPIQSAPEGPQQGTMWQGRNEIGYSYPNRQSAGSAPQGPAYHG
VTRTDDILHSEQRVNHEGPWPSHGNRQPPYGPSASVPPMTRPPQSNYQTPPSMQNHIPQV
SSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPIPASHIAPAAVQPPMIRRDITFPPGS
VEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFN
LSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPQRFCRSSASSHEEGEEDE
ELRSLNYEEEDDEEEEAAAFSSKDRASLECSEEKLVSKFDKLPIKIVQKNDLFVVDYSDK
LGRVQEFESGLLHWRIGGGDTTEHIQTHFESKMELPMIHKRASYNSVSRKRTAAESNPST
REGEALPSDSSSEKRITATMDDMLSARPSSLSGEEEEAKASETEKESKFPFGISPAQSHR
NIKILEDEPHSKDETPLCTIQDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLI
LGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEVLRENTLVTLANISGQ
LDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDN
NVDLILATPPFSRLEKLYSTLVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKG
SIGNLLGFLEDSLAATQFQQSQAGLMHMQNAPFESTSVDMMRRAARALLALAKVDENHSE
FTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggccacagccgtatggaggaaacaacccctacacacaa
cagcagggacctcaggcggggccacagcaaggacatggctatccaggacagccctatggg
ccacagactccccagagatatcccatgggaatgcaaagcaggacgcaaagtacaatgggc
agcatctcgtatgctcagcagattccaccttatggacagcagggtcccagtgcatatggg
cagcaaagccagactccatattacaaccagcaaagccctcatccccaacagcagcagcct
ccatactctcagcagacaccatcccagacccctcactctcagccttcttatcagcagcag
caacagcctcagtctcaagctccacagcttcagacatcgcaacctgcgtattctcagcag
cagtctcagccaccccatcagcagtccccaactccatatcctcagcagcagtccacagcc
cagcagcaccaacagaatcagcctccctactcacagcagcagtcacagtcaccctatcag
cagcagcagcagcagcagcagcaaactcagcagacagcttcctcggctctttctcagcag
tcatcttcataccctcagtcacagccgcagcagcagcagcctgcatattcccagcaacgc
ttcccccctcctcaggagttatctcaagaatcattcggctcccagacatcatccgctccc
tcaatggcttccagtaaagggcaagaggatatgaacttgaatcttcagtccagaccttct
agcctgccggacctgtctggttcaatagatgatctacccatgggtacagaaggagccctg
agccctggagtaagcacatcagggatttccagcagtcaaggagagcagagtaacccagct
cagtctcctttctctccacatacctctcctcacctgccaggcatcagaggaccttcccca
tcccctgttggttctccagctagtgttgctcagtcccgctctggtccactttcacctgct
gcagtgccaggcaatcagatgccaccacgaccacccagtggccagtcggacagtatcatg
catccttccatgaaccagtcaagcatagcgcaagatcgaggttacttgcagagaaatcct
cagatgccccagtacagttctccccagcccggctcagccttatctccccgtcagtcttct
ggaggacagatgcacgctggtatggggccataccagcagaactccatgggaagctatgga
ccccaggctgggcagtacggacctcaaggaggttatcccaggcagccaaactacaatgct
ctgtccaatgccaactaccccagtcccgggatgggaggaagcatgaacccaatggcagca
gggagccagatgcatgggcagaccggtgtgcctccatacagtgggcttcctcccgggagg
atgagccacgcagccatggggaacagaccttatggacctaacatggcaaatatgcctcct
caggtggggacagggatgtgtcccccaccagggagcatgaatcgcaaagcacaagaagcg
gctgctgccgccatgcacgctgctgccaactccatccagaacaggcctcctggttatccc
aacatgaaccaaggaggaatgatgggtactggacctccttatggacagggaattaacagc
atggctggcatgatcaacccccagggcccaccttatcccatgggtggaaatatggctaac
aactctgcagggatggcagcaagtcctgaaatgatgggtcttgcggatgtcaaattaact
cctgcaactaaaatgaacaataaggctgatgggaccccaaaagcagaatccaagtcaaag
aagtccagttcctctactacaaccaatgagaagatcacaaaactctatgagctgggtggt
gagcctgagaggaagatctgggtagatcgttacctggcctttactgaagagaaggccatg
ggcatgacaaacctcccagcagttggcagaaaacccttagatctttaccggctctacatc
tcagtgaaggaaataggaggattgactcaggtcaacaaaaacaagaaatggcgtgagtta
gccacaaatctcaatgtgggcacgtccagcagtgcagctagttctttgaagaagcagtac
atccagtgtctctatgcctttgagtgcaagattgagcgaggtgaagacccccctccagat
atctttgctgctgctgattcaaagaagtctcagactaagatacagcctccatctccagcg
ggttcaggctcgatgcaggggcctcagacgcctcagtccaccagcagctccatggcagaa
ggaggagacctgaagcctcctactccagcatctacaccacacagtcagatgcctcctttg
ccaggcatcaggagtaactcagtgggccttcaagatgcctttacagatggcagtgatccc
acgttccagaagcggaactccatgactccgaatccagggtaccagcccagcatgaatacc
tccgacatgatgggtcgcatgtcttatgagccaaataaggatccttatagtagtatgagg
aaagctccaggaagcgatcccttcatgtcctcagggcagggccccaacagtggtatgggt
gacccttacaatcgtgctgcaggtccagggatgggtaacatggccatggggcagcggcca
cactatccctacggcggtccttacgacagagtgaggacggagccaggcatgggaccagag
ggcaacttagcagctggaactccacagccaaacatcatgccttccacctcggaatcaggg
atgtattctcccagccgctaccctcagcagcagcagcagcagcaaagacatgattcctat
ggcaatcagttctccactcaaggcacatcctcgggcagccccttccctagccagcaaact
accatgtatcaacagcaacagcagaattacaagcgaccgatggacggcagctacggccca
cctgccaagcggcatgaaggggagatgtacaacgtcccgtacagcgcagggcaggggcag
acgcagcagcagctgcctccagcacagactcagcaaccaagccagcagcaggctgcacag
ccttctccacagcaggacctgtataaccagtatgggagcacataccctgctgctgaccgc
cgatctgcgggagggccgcagaaccagttcccattccaatttggcagagacagggtctcg
gctcccccaggctccaatgctcagcaaaacatgcctcctcagatgatggggggtcccatc
cagtctgctccagaagggccccagcaaggcaccatgtggcaggggcgcaatgaaataggg
tacagctatccaaatcggcagagcgctggctctgcaccccaggggcctgcttatcacgga
gtgactcgaacagatgatatactgcattcagaacagagggtaaaccatgagggaccgtgg
ccttcccatgggaatcggcagcctccatacggcccctctgcctctgttcccccaatgact
aggccacctcagtctaactatcagacccctcctagcatgcaaaatcacattcctcaggta
tccagcccagcacctctgcccagacctctggagaatcgcacttctcccagtaaatctcca
tttctgcactcggggatgaaaatgcagaaggcaggaccgccaatccccgcatcgcacatc
gcaccagcagctgtacagcctcccatgatacgaagagacatcaccttcccaccaggatca
gtagaagctactcaacctgtattaaagcaaaggaggcggctgacagcaaaagatattgga
actcctgaagcttggagagtgatgatgtctctgaagtctgggctgctagctgaaagtacg
tgggccttagataccataaacatcctgctctatgatgacaacagcataatgaccttcaac
cttagccagttgccaggcctgctggaactcctcgtggagtatttccggcgctgcctgatt
gagatctttggaatcctgaaggaatacgaggtgggagacccagggcaaagaacactatta
gatccccagaggttctgcagatcttcagcttcttctcatgaggaaggggaggaggatgag
gaactacggagcctaaactatgaggaggaagatgatgaggaagaggaggcggctgcattt
tcaagcaaggacagagcatctctggagtgcagcgaggagaaattagttagtaaatttgac
aagcttccgatcaagattgtgcagaagaatgacctgtttgtggtagattattcagacaag
ctgggacgagtgcaggagtttgagagcggcctgctgcactggcggattggtggcggtgac
actactgagcacattcagacccactttgagagcaagatggagctacctatgattcacaaa
cgagcatcctacaattctgtctcgaggaaacgcacagcagctgagagcaatccaagcact
agggaaggagaggctcttccatctgacagctcctcagagaagagaataactgccaccatg
gatgatatgctttcagcacgtccaagctcattatcaggggaggaggaagaggccaaagct
tcagaaacagagaaggaaagtaagtttccatttggcattagtccagcacagagtcacaga
aatataaaaattctggaagatgaacctcacagtaaagatgagacacccctctgcaccatc
caagactggcaggactctctggcgaagcgctgcatctgtgtctccaacatcatcaggagt
ttatcatttgtgccgggcaatgactttgaaatgtccaaacatcccgggctgctgctgatt
ctagggaaactgattcttttacaccacaagcacccggagcgcaagcaggcacccctgacc
tatgagaaggaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgg
gactgcctggaggtgctgcgtgaaaatacactggtcacactggccaacatttctggccag
ctggacctgtccccttacccagaaagcatctgtttgcctatcctggatggactccttcac
tgggcagtatgtccatcagcagaagcccaggacccctttccaacgctggggccaaatgcg
gtcctctcccctcagagactggttttggaaacactcagcaaactcagcatccaggacaac
aacgtggatttgattcttgcaactccccctttcagtcgcttggagaagctgtacagcacc
ctggtgcgtttccttagtgacagaaagaacccggtgtgtcgagagatggctgtggtacta
ctggccaacttggcacagggggacagcctggcagcgagagcgattgctgtgcagaagggg
agtattggcaacttgctgggctttttggaggacagcctggccgccacgcagttccagcag
agccaggccggcctgatgcacatgcagaacgcgccctttgagtcgacaagcgtggacatg
atgcgccgagctgctcgggcgctgctcgccctggccaaggtggacgagaaccactcggag
ttcacgttgtacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttg
gtttcacaagttatttgtgatgtactatttttaattggccagtcatga
DBGET
integrated database retrieval system
