Meleagris gallopavo (turkey): 100541861
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Entry
100541861 CDS
T01523
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100541861 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgp03041
]
100541861 (DHX15)
03009 Ribosome biogenesis [BR:
mgp03009
]
100541861 (DHX15)
Enzymes [BR:
mgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100541861 (DHX15)
Spliceosome [BR:
mgp03041
]
Complex A
U2 snRNP components
U2 related factors
100541861 (DHX15)
Complex B
100541861 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100541861 (DHX15)
Ribosome biogenesis [BR:
mgp03009
]
Eukaryotic type
90S particles
Helicases
100541861 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Atrophin-1
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
DUF3915
Motif
Other DBs
NCBI-GeneID:
100541861
NCBI-ProteinID:
XP_010708636
Ensembl:
ENSMGAG00000012477
LinkDB
All DBs
Position
4:53377674..53414392
Genome browser
AA seq
754 aa
AA seq
DB search
CKYLIFCCFLTHFRKDRDRDRDRDDRKDRDRDRDRDRDRDREREKEKELRAASNSTLIAA
GLPPMKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGE
TGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSI
RFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVR
QRADLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQ
IHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIF
EPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI
SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD
LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDY
NCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESV
QWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQV
AHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKI
APQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
tgcaagtatctaattttctgctgtttcctaactcattttaggaaggatcgcgaccgagac
agggaccgtgatgatcggaaagatcgtgatagggatcgtgacagagacagagatcgtgac
agagaaagggagaaggaaaaggagttgcgagctgcatctaactctacgctcattgctgct
gggttaccacctatgaaaccagcaatgattccacacagtattaaccctttcacaaatcta
ccacatacacctcgttattatgacatactgaagaaacgactacagcttcctgtctgggaa
tataaagaaagattcacggatattttgattcggcatcagtcatttgtgctggttggagag
actgggtctggtaaaacaacacagatccctcagtggtgtgttgactacatgcgctcgtta
cctggaccaaagaggggagtggcatgtacccagccgaggagagtagctgccatgagtgtg
gcgcagagggttgctgatgagatggatgtaatgttgggccaggaggttggttactccatt
cgatttgaagactgcagtagtgcaaaaactattctcaagtatatgactgatggtatgtta
cttcgtgaagcaatgaacgatcctttgctggagcgctatggcgttataattcttgatgag
gcccatgagcgaacactggctacggatattttgatgggagttctgaaagaagttgtaaga
cagagagctgatttgaaggttatagttatgagtgctactttagatgctggcaagtttcag
atctactttgataactgtcctcttctaactattccgggtcgcacccatcctgtggagata
ttctatactccagaaccagaaagggattaccttgaagctgccattcgaacagtaatccag
attcacatgtgtgaagaagaggagggagatcttctactctttcttactggacaggaggag
attgatgaagcctgcaagaggataaaacgtgaaattgatgacttaggtcctgaagtgggt
gacatcaaaatcattccattgtattctacccttcctcctcagcaacaacagaggattttt
gaacctcccccaccaaaaaaacagaatggagcaataggaagaaaggttgttgtgtccact
aacattgctgagacatcattaacaatagatggtgttgtgtttgtgatcgatcctggcttt
gcaaaacaaaaggtatataatcctcgtatcagagtggagtctctcttggtgactgcaatt
agtaaagcttctgctcagcagcgagctggccgtgctggtcgtactagaccaggcaagtgc
ttcaggctttacacagagaaggcttacaaaactgaaatgcaggataacacgtaccctgag
attttgaggtctaacttaggatctgtagtgttgcagctcaagaagcttggtatagatgat
ttggtgcactttgattttatggatcctccagctcctgaaactctgatgagagccttagag
ctcttgaattatctggctgctttgaatgatgatggagacttgactgagttgggatccatg
atggctgaatttccactggacccacaactggctaaaatggttattgcaagttgtgactac
aactgttctaacgaggtcctatctattactgccatgttgtcagtcccacagtgttttgtt
cgtcccacggaagcaaagaaagcagcagatgaagccaagatgaggtttgcccacattgat
ggagatcatctgacgctgctgaatgtctaccatgctttcaaacaaaatcatgagtcggtt
cagtggtgctatgacaacttcattaactacaggtccctgatgtctgcagacaacgtacgc
cagcagctgtcacgaatcatggataggtttaatttgcctcgtagaagcacagacttcacc
agccgagactattatatcaatataagaaaggcattagttactgggtatttcatgcaggtg
gcacacttggaacgaacagggcattacttaacagtaaaagataaccaagtggtacagttg
catccttccactgttctcgatcacaaaccagagtgggtgctttataatgagtttgtcctt
acaacaaagaactacatccggacatgtacagacatcaaacctgaatggcttgtgaaaatt
gcccctcaatattatgacatgagcaattttccacaatgtgaagcaaagagacagttggat
cgcatcattgccaaacttcagtccaaggaatactcgcagtactga
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