Meleagris gallopavo (turkey): 100541934
Help
Entry
100541934 CDS
T01523
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100541934 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mgp04121
]
100541934 (SLX4)
03400 DNA repair and recombination proteins [BR:
mgp03400
]
100541934 (SLX4)
Ubiquitin system [BR:
mgp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
100541934 (SLX4)
DNA repair and recombination proteins [BR:
mgp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100541934 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_jaz
GPAT_C
Zn-C2H2_12
B129_C2H2-zf
zf-C2H2_4
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
100541934
NCBI-ProteinID:
XP_003210814
UniProt:
G1NAH3
LinkDB
All DBs
Position
16:complement(1161257..1191371)
Genome browser
AA seq
1862 aa
AA seq
DB search
MDEQDNDFKELWKNLLGKGKKKSEDAEAAKRVQKRSKNTAAKSRLRRGKATAKSQNQHLF
PAAKQKSLLQDLGPKLQTLEHKADSDTVACSSGETSEGDGSRSPFPASQLSTTGSDCSQG
TLTVNARSGCSQTTLSFLPATQPGTCSSPTSKIPPLTGSKMRVAELVVERMQQFKRVAPD
QLKHSTDCSLPKSLTSGDFAGESQEQNSAENDLHDLQSMQHDSALALALQQETQKDSLES
LEDAGLFFCQICQKDLSAMNSTRREQHVNRCLDEMEEAQMSSSSKPAVPECPICGKQFQT
PQSRVSHLKRCAVEMDVPPKMLLQAVQMQVSMLGEAPLQFPSNQPSRSKRKVSSKEDSKN
KQKRAKMETKDEDLLVAMAMSRSLLEQEKQEQAKSVTNVKPVTALPIRWKPGSEKRRRRR
GPTTPPPLLLQDPEKVRRRIEERVAMLLAQEVEFPPTPQLPTSRILEVESGKAAWLLPLP
KNKDCFLWNFSALTGPCDPESFYAAGLTPPIEPWKPVQNHKPEDALPSAGSDQPKVSQQI
QPDFGSHESTCREVRDQTCDEFKSCPEEDGQILSHSQKDIQNLQDLVELAREGLTLTQWN
LDIGHTHAAEQAGKELTSSDTPCTGFVPSLEEKRFLTRSCKKSSLRSLAEDFSAMVNNPH
LSDVQFQVDSGEILYAHMFVLYARCPQAIQTVHSEGFLVEEDGNAQIHRVLLSDVTGEAV
CAFLRYLYAADADIPAEVVPQVGALAARFGVRELMANCENNTGESQVSSGVDSECDLISV
TDDKDCEDRAENFQDLLKSMWVGEDEEEVAVLNQECQKEDDNAVGEQELEEIYEFAATQR
RMIQGKTTPSEGTDCSMCSETEAAQDMNQQTEEEEVKRSVSSSVSSNFKDLRENNDVEIS
RCDLSAEKERMQNINRYRSVNATHITSVPHHREPQKRDVASHGATTDEEETIRRCEGGKD
SRSSQVSHDVKGEDRCEKEFLSFATDTKINDSYEHLFSATQGDYCEPSPTKEVSKVSEEA
LAEKHVDVNDFHLHSEIQKDFSPCKNGSYRSPPSKSFVPLFPVVGSSPLSPKSDRKLTRE
HMSTPKQKKKSFPPDEILFQKASELETASPPELPNSDLNKHVPVFSAPVVRTQDPAAQGS
KKGDVIVLSSDDEMELEDKKSPESGPVLKKVESPQQLKCTNIGRGPEIPKPEHNTSLTET
EQRSLQISHVVTDKVHVSDDVKMSTELPPSSHADTCTEGEQSPEKMLSHEVSSGTDSSWL
VPDTPVQTKSRSSSTRTHVTSINSSRSPESKVSTKSLTADRSNHEMDGKVTEVHQAALSD
RHLPVENCVSERNPSSSPEAGSVFEKSVPLSSVDPVLALAHTNSKSKCANTSFLSKPEPP
CLGKSMEDKSNVSVVEIQDSEGEKEISIVSLSSSVLLADEPAIPADDCWHVKYLSPIRAN
SQDSRQNGHANTSAASSPQADFVHDQWESPDQAWEIKGSTPLQGTPVGRRTTLLRLEKSP
IEACTSRGSRPLSSYLNSKLWDQWDGEEEEDEFPEVLPLSQRVSAAAGADLIKTPEPACQ
ENNSSPRTPVTPMPSYSMMETPQLKEELKRFGVRALPKRQMVLKLKEIFQYTHRDGDSDF
EDEVPSSQPPQKKSPAKRCRQSKAAQTRGGKSPKASKAVSKRKQVATGSSVLPVGRSEDD
LVGPSKKGCAAPKQRNEMIHHPKGDKEQKRSAASPEGWSLGADGEEPMLSASQKSTASSG
DGSDISFSSQSSFVKELEACAFASEEEEEELPASQAAAREEEKLEAVRCYIRSNPALYDR
ILFYEPIELADLHAELKLNGIKISKAKLLDFLDAQCITFTTAGARKEKEQKRKGGRKKRK
RY
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaggacaatgattttaaagagctgtggaagaatcttttgggtaaagggaag
aaaaaatctgaggatgctgaggcagcaaagagggttcagaaaagatcaaagaatactgca
gcaaaaagcagattaagaagaggcaaagctactgctaagagccaaaaccagcacctcttt
ccagcagcaaagcaaaaaagcttgcttcaggatttgggtcctaagttacaaacactggag
cacaaagcagacagtgacactgtggcctgcagtagtggtgagacctcagaaggggatgga
agcagaagccctttccctgccagccagctgagtaccacaggcagtgattgtagccagggg
actctgacagtaaatgctcggagtggttgttcccagacaacgttgtctttccttcctgct
acacagccagggacctgttcttcacccacctcaaagataccacctctcacaggctcaaag
atgcgggtggcagagctggtagtggagagaatgcagcagttcaagagagtggcacctgat
cagctaaaacacagcacagattgtagcttgccaaagtccttaaccagcggagattttgct
ggtgaaagccaagagcagaactcagcagagaatgatctccatgatcttcaatccatgcag
catgacagtgctctggctttggcccttcagcaggaaacacagaaggattctctggaaagc
ctggaggatgcaggcttgttcttctgtcagatctgccagaaggatctctcagctatgaac
tcaacgcgacgagagcagcatgttaacaggtgtctggatgagatggaagaagcacagatg
tcatcctccagcaaaccagcagtccctgaatgtcccatctgtgggaagcaattccaaacc
ccccaaagccgagtcagtcacttgaaacgctgtgctgttgagatggatgttcctcctaag
atgcttcttcaggcagtgcagatgcaggtgtccatgcttggtgaggcacctcttcagttt
cccagcaatcaaccaagcaggtcaaagcgaaaagtctcctccaaagaggactcaaagaac
aagcagaagagggcaaaaatggagactaaggatgaagatttgctggttgctatggcgatg
tcacgctctctgttggagcaagaaaagcaggaacaagcaaaatcagttacaaatgtgaaa
ccagtgactgctttgccaatcagatggaagccaggatcagaaaaaagacgacgtagaaga
ggcccaactacccctccaccattactgctgcaggatccagagaaggtgcgcagaaggata
gaagagagggtagctatgctgcttgcacaagaggtggaattccctcccactcctcagctt
cccaccagcaggattttggaggttgaatctgggaaagcagcctggctcttgccattgccc
aaaaacaaggactgctttttgtggaatttcagtgctctgacaggaccctgtgaccctgaa
tcattctatgctgctgggttaacccctccaattgaaccttggaagcctgtgcagaatcat
aaaccagaggatgctctgccatcagcaggatctgatcagccaaaagtatcccagcaaatt
cagcctgactttggttctcatgagtctacttgtagagaggttagagaccaaacttgtgat
gaattcaagtcatgccctgaagaagatgggcagattttatctcacagccagaaggatatt
cagaacctgcaggatctagttgaattggccagggaaggacttacccttactcagtggaac
cttgatattggccatactcatgcagcagagcaggcaggaaaagaactgacttccagtgat
actccatgtactggttttgtcccttcacttgaagagaagagattcctgacacgcagctgt
aagaaatcctccctgaggtcactggctgaagatttcagtgcaatggtcaacaacccccac
ttaagtgatgtccagttccaggtggactctggggaaatcctttatgcccacatgtttgtg
ttgtatgcacggtgtccgcaggccattcagactgttcacagtgaagggttcttagtggag
gaggatgggaacgcacagatacaccgtgtgctgctgagtgatgtgacaggagaggcagtc
tgtgcattcctgcggtacctttatgctgctgatgctgacatccctgctgaggtggtgccc
caggtgggggctctggctgccaggtttggcgtgagggagctgatggcaaactgtgaaaat
aatactggagagagtcaggtgtcttctggagtggattcagaatgtgatctgatctctgtg
acagatgacaaagattgtgaggacagagcagagaacttccaagacctcttgaagtctatg
tgggtgggtgaagatgaggaagaagtagctgtcctcaaccaggaatgccagaaggaagat
gacaatgcagtgggtgagcaggagctggaagaaatctatgagtttgctgcaactcagaga
aggatgattcaaggtaaaacaacaccgagtgaaggaactgactgcagcatgtgcagtgag
actgaggcagcccaagatatgaaccagcaaactgaggaggaagaggtaaagagatctgta
tcttcttcagtaagcagtaacttcaaggatttaagggaaaacaatgatgtggaaatatct
agatgtgacttatctgcagaaaaagagagaatgcagaatataaatagatacagaagcgtg
aatgctacacacatcacttctgtgcctcaccacagagaacctcaaaagagggatgtagca
tcccatggtgccaccactgatgaagaagagactataaggagatgtgaaggtggaaaggac
tccaggtcatctcaggtttcacacgacgtaaaaggggaagatcgctgtgaaaaagagttt
cttagctttgccactgatactaaaataaatgacagttatgaacacttattttctgcaact
cagggagattactgtgagccttccccaacaaaagaagttagtaaagtatcagaagaggct
cttgctgaaaaacacgttgatgtcaatgattttcatctgcacagcgaaatacagaaagac
ttttctccatgtaaaaatggttcttacaggagtcctccttccaaatcttttgtgcctctt
tttcctgttgttggatcttcacctctgtctccaaaatcagacagaaagcttacgagagaa
catatgtcaacaccaaaacaaaaaaaaaaatcattcccacctgatgaaattctttttcag
aaggccagtgagctggagactgcatctccaccagagcttcccaacagtgatttaaacaag
catgtcccagtgttctcagcaccagttgtcagaactcaggatcctgcagctcaggggagc
aagaagggtgatgttattgttttatcttctgacgatgaaatggagttagaagacaagaag
tcaccagagtcaggccctgttctgaagaaagtggaaagccctcagcaactgaaatgtaca
aatataggacgtggtcctgaaataccaaaacctgagcataacacatcactcactgaaaca
gagcagagatcactgcagatctcacacgtcgttacagataaggtgcacgtaagtgatgat
gtaaagatgtccactgagttgcctcccagtagccacgcagatacttgtacagagggtgag
cagagcccagagaagatgctcagtcacgaagtgtcttcaggtacagacagctcctggcta
gtgcctgacacaccagttcagaccaaaagcagaagttcctcgacacggacacacgtcaca
agtattaactcttccaggagtccagaatctaaagtcagcacaaaaagcctaacagctgat
agaagtaaccatgaaatggatggaaaagtaacagaagttcatcaagcagcgttgtcagac
agacatttgcctgtggagaactgtgtcagtgaaagaaatccttccagcagcccagaagca
ggatcagtttttgagaaatctgtaccactttcttcagtggatccagttctcgcccttgct
cacaccaactcaaaaagcaaatgtgctaatacctcatttttgtccaaacctgagcctcct
tgccttgggaagtcaatggaagataaatcaaacgtcagcgtggttgagatacaggacagt
gagggggagaaggaaataagtatagtgtctttgagcagtagtgtcttgcttgctgatgag
cctgcaattcctgctgatgactgctggcacgttaagtatctgtcaccaatcagagctaac
agccaggactccagacagaatggccatgcaaacaccagcgctgccagcagcccccaagct
gactttgtgcatgaccagtgggagagtccagaccaagcgtgggaaattaagggcagtact
cctcttcaaggaactcctgttggcagaagaacaactttgctccgtcttgaaaagagcccc
attgaggcatgtacatcacggggcagcagacccctgagcagttacctgaactccaaactt
tgggatcagtgggatggagaagaggaggaagatgaatttccagaggtgcttcctctgtca
cagagggtatcagcagcagcaggtgcagatcttataaagactcctgaacctgcctgtcaa
gagaacaacagttctcccaggactccagtgacaccaatgccatcttactccatgatggag
acaccacagctgaaggaggagttgaaaagatttggagttcgtgctctcccaaaacgccag
atggtattgaaactgaaagagatattccagtatactcaccgggacggggactctgacttt
gaggatgaagtcccatcctcccagcctccccagaagaagtcccctgccaaacgctgtagg
cagtcaaaggcagctcagactagaggtggaaagagtcccaaagcctcgaaggctgtgagc
aaaaggaagcaggttgcaacaggttcttcagtgctccctgtagggaggagtgaggatgac
cttgtcggaccctctaaaaaaggctgtgcagcacccaagcagagaaatgaaatgatacat
catccaaaaggagacaaagagcagaaaaggtcagctgcatctccagaaggatggtctctg
ggagctgatggtgaggaaccaatgctctctgcgtctcagaagtctacagcttcttcaggg
gatggaagtgacatctctttcagttcacagagttcttttgtgaaggaattggaggcctgt
gcatttgcatctgaagaggaggaagaagaacttccagcatcccaggcagcagctcgggaa
gaagaaaaactggaggcagtgaggtgctacatccgctcaaacccagccctgtatgacagg
attctcttctatgagcctattgagctggctgacctgcacgcagaattgaaactgaatggc
attaagatttccaaggcaaagctgctggacttcttagatgctcagtgcatcacctttacc
acagctggagcccggaaagagaaggaacagaagagaaaggggggcagaaaaaagaggaaa
cgatactga
DBGET
integrated database retrieval system
