KEGG   Meleagris gallopavo (turkey): 100542020
Entry
100542020         CDS       T01523                                 
Name
(RefSeq) LOW QUALITY PROTEIN: roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
mgp  Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mgp03000]
    100542020
   04121 Ubiquitin system [BR:mgp04121]
    100542020
Transcription factors [BR:mgp03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    100542020
Ubiquitin system [BR:mgp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100542020
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-C3HC4_4 zf-RING_2 zf-CCCH zf-C3HC4_3 zf-C3HC4 FYVE zf_CCCH_4 zf-C3HC4_2 zf-CCCH_4 PaaA_PaaC Baculo_IE-1 Vesi_VP2 zf-RING_4 Sina_RING zf-RING_6
Other DBs
NCBI-GeneID: 100542020
NCBI-ProteinID: XP_031410707
LinkDB
Position
10:complement(13715194..13741877)
AA seq 751 aa
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITICSGAEDTKHYEESKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSDE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTETPLKPGKMDHLSSSAPGSPPDLLESVP
KSSISALPVNPHPVPARAPTDLPSVSVTKQLQMVPRGSQLYTTQQADIFYQDHRGTAPPF
EPAPYQQGVYYPQTMSRFVRPPPSAPEPGPPYLDHYSPYLQDRVVSPQYTQPQQYLPWDS
PYIHHTTTAAVCTPLCSHTSERRWGQGFLGPLKFHKQLYPPTYLNPGTDTHKQRVIAQWL
HISVRSDLPATGYGFPIVSLKLFPREKMQTS
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgcctgtacaagctccacagtggacggattttctctcctgtccaatttgcacacagact
tttgacgaaacgatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcgtgcccttttgaccagaccactatcaacacagat
attgaacttcttcctgtgaactcagccttgctgcagctcgtgggtgctcaggttcctgag
cagcagccaattactatatgtagtggagctgaagataccaagcattacgaggagagcaaa
aaatgtgtggaagaattagcattgtacctcaaaccactcagcagcgcgagaggtgtgggt
ctgaacagtactactcagagtgtcctgagtcgtcctatgcaaaggaaacttgtgacactg
gttcactgccagctagtggaggaagaaggacggatcagagccatgcgtgcggcgcggtca
ctcggtgaaagaacagtcacagagctcattcttcagcatcaaaatcctcagcagctctct
tccaacctctgggctgcggtgagagccagaggatgccagttccttggaccagctatgcaa
gaagaggctttaaagctggttctgctggctctggaagatggatctgccttgtcacgaaag
gtcttggttctctttgtggttcagaggctggagccgcgatttcctcaggcttctaaaact
agcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtgacaaagcgc
gatgaagattcctccctgatgcaactgaaggaggaatttcgtacttacgaagctctgaga
agggaacatgattcccaaattgttcaaattgctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttgtatggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattaactattgct
cttcagaggactggagatccagctaacctgaatcgtcttcgacctcaccttgagctcctg
gcaaatattgatcccagcccagatgctccacctccaacgtgggagcaactggaaaatggg
ctggttgctgtaaggactgtggttcacggcttagttgattatatccagaatcacagcaag
aaaggaactgatcagcaacagcctcctcagcacagcaaatacaagacgtacatgtgccga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag
gaggagctagagaaatttcgtaaaatgaacaagcgtctggttccaagaagacctctgagt
gcctccctgggccagctgaatgaggtgggcctgccttcaggagctatcctctcggatgaa
gggggagtggacttgcccaataggaaaacctctgctctgccaaatggaattgtgtcaaca
ggcagcacagtgacgcagcttatttctcgagggactgaaactcctctgaagccagggaag
atggaccatctgagtagcagtgcccctggatcccctcctgacttgctggaatctgtcccc
aagagctctatttctgccttaccagtgaaccctcatcctgtgcctgctcgggcaccaaca
gatctgccttcagtgtctgtcacaaaacagttgcaaatggtacctcgtggatctcagttg
tatactactcagcaggcagatatcttttatcaagatcataggggaactgccccaccgttt
gagccagcaccctaccaacaaggagtttactatcctcaaaccatgtctcgctttgtgcga
cctcctccatcagctccagaacctggtccaccttatttagaccattactcaccctacctt
caggatcgtgtggtgagcccccagtacacacagccacagcaatatctcccatgggacagc
ccatatatccaccacactacgacagccgccgtgtgtacccccctgtgcagccataccagc
gagaggagatggggacagggcttcctcggaccattgaaattccacaagcagctgtaccct
cctacgtacctgaatccagggacagatacccacaaacagagggttattgcccagtggctc
cacatctcagtcagatcagaccttcctgccaccgggtatggttttcctattgtgtctttg
aagttgttccccagagagaaaatgcaaactagttga

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