Meleagris gallopavo (turkey): 100542078
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Entry
100542078 CDS
T01523
Symbol
THOC2
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03013
Nucleocytoplasmic transport
mgp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100542078 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
100542078 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100542078 (THOC2)
03041 Spliceosome [BR:
mgp03041
]
100542078 (THOC2)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100542078 (THOC2)
Spliceosome [BR:
mgp03041
]
Complex C
Other components
EJC/TREX
100542078 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100542078 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
100542078
NCBI-ProteinID:
XP_010713706
Ensembl:
ENSMGAG00000007345
LinkDB
All DBs
Position
9:15516578..15568137
Genome browser
AA seq
1592 aa
AA seq
DB search
MATVLPAEWIKNWEKGGRNEFLQLCRALSEDKSHDSLSFRDIQQALYELSSHVVRGNLKH
EQASGVLADIIEFREDMPSILADAFCILDIETSCLEEKXKRDCFTQLVLSCLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISPLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCV
LSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHANPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHQISSKYDELKKAEKGNKQQ
HKVHKYITACELVMAPVHEAVISLHPPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREV
NKLKVQMKAIDDNQEMPPNKRXKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNW
LLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQN
GPGGAGMPTSLTINTAKLEENAAEETDKLKEKSQGTVKVINKTVNATPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKEKIPATTPETKALGKDGKDKPKEERANKDEKPREIKEK
TPKSDKEKEKAKKEEKASKEEKSKTIVTTIESKSVAEKEREKEPSREKDVAKDMKSKENT
KGGEKIPVAGSLKSPVPRSETSECEREQKRRKVDIHSSPSHSSTVKDNLNELKDSSTKHY
INHTTPTLSKSKEREVDKKDLDKSRERSREREKKEEKDRKDRKRDHSNSDREVPQDSTKR
RKEENGTTGSSKHSSESPSDSPRSNEKEREKSKSKSSGKEKGDSIKAEKMEKSSSGSKKE
SRHDKEKEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgctccccgccgagtggataaagaactgggagaaagggggcaggaacgag
tttttgcaactgtgtcgcgctctcagtgaagacaaaagccatgacagcctcagtttcaga
gatatccagcaggctttgtatgagctttcatctcatgttgttagaggaaacttgaagcat
gaacaagcttctggggttcttgctgatattatagaatttcgtgaggacatgccttccatc
ttagctgatgcattctgcatattagatattgaaacaagttgcttagaagaaaaanctaaa
agggattgttttactcagctggtgttatcatgcttgtatcttgtatccgatactgtccta
aaggagcgtttagatccagaaacactggaatcattaggacttatcaagcagtctcaacag
ttcaaccagaagtctgttaaaataaagacaaaactattttacaagcaacagaaattcaat
ttattacgagaggagaacgaaggttatgcaaagctgattgcagaactggggcaagaccta
tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcaggcctgag
tatgatgatttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaact
ctatgccatatccttggattcaaattcaagttttatcaggatccaagtggtgagacacct
tcctccctgtacagagttgctgctgtcctgttgcaacataatctcatagatttggaagat
ctttatgttcatcttcttccaggggataatgccatcattgaagagcacaagcgagagata
gtggaagctaagcaaattgtgagaaaactcaccatggttgtcttatcctctgagaagact
gaggaaaaggagaaggagaaagaaaaagaggaggagaaaaccgagaagcctccagataat
cagaagcttggtttattggaagctttattaaaaattggtgattggcagcacgcacaaagt
attatggatcagatgcctccattttatgctacttcacataagcccattgcgattgccctt
tgccagcttgtacacgtgacaatcgaacctttgtaccgcagggttggtgtaccaaaaggg
gctaaagggtcaccaatttctcctctgccaaacaagagagcaccgaaacaagcagacagc
tttgaagacttgagaaaggaagtgttcaacatgctatgctaccttggtcctcatctctcc
cacgatcccattttatttgcgaaagtggtgcgccttggaaaagcatttatgaaagagttt
cagtctgatggaagcaagcaagaagataaggagaaaatggagatactgttcagctgcgtg
ttgagcattaccgatcaggttctgcttccttctctttctctgatggactgcaatgcgtgc
atgtctgaagagttatggggaatgttcaaaacatttccataccagtaccggtaccgtctt
tatggacagtggaagaatgaaacatacaatagccatcctctcctagtgaaagttaaagct
caaaccatagaccgagccaagtatatcatgaagcgtctgactaaggaaaatgtgaaacca
tctggaagacagattgggaaactcagccatgccaatccaaccattttatttgattatatt
ttatcacaaatacaaaaatatgataacttaataaccccagttgttgattcactgaaatac
ctcacttcactgaattacgacgtcttggcatattgtatcattgaagctctggcaaacccc
gagaaggagagaatgaagcatgacgacactactatctcgagctggctgcagagtctggct
agcttttgtggtgctgttttcagaaaatacccaattgaacttgctggtctacttcaatac
gtagccaaccagttgaaagctgggaaaagctttgatttgcttattttaaaagaggtagta
caaaaaatggcagggatagaaattacagaagaaatgacaatggaacagttggaagccatg
actggtggagaacaactaaaagctgagggtggatactttggccaaattaggaatacgaag
aagtcttctcagaggttgaaggatgcattattggaccacgatcttgccctcccactatgc
ctgcttatggctcaacagagaaatggtgtgatctttcaagaaggaggggaaaaacatctg
aagctggtgggaaaactgtatgatcaatgccatgacaccctggtacagtttggtgggttt
ttagcatccaacctgagcacagaggattacattaagcgagtgccttcaattgacgttctt
tgtaatgagtttcacacacctcatgatgctgcgtttttcctctcgaggcccatgtatgca
caccaaatttcatcaaagtatgatgaacttaaaaaagctgaaaagggaaataaacagcaa
cacaaagttcataaatacattacagcatgtgaactggtgatggctccagttcatgaagct
gtgatctctctgcaccctcccaaggtttgggatgacatcagtcctcagttttatgccaca
ttctggtctctgactatgtatgaccttgctgtcccacacagcagctatgacagagaagtc
aataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa
agannaaaagaaaaagaacgttgcactgctcttcaggacaagctccttgaagaggagaag
aaacaattagagcacgttcaaagagttttacagagactgaaattagagaaggataactgg
cttctggcaaagtctaccaaaaatgagactatcacaaagtttttgcagttatgtatattt
cctcgctgcattttttcggcaatagatgcggtttattgtgctcactttgtagaactggtt
catcagcagaaaacacccaacttctccacgcttctctgttatgatagagttttctctgat
attatatatacagtagcaagttgtaccgaaaatgaagctagtagatacggcaggtttttg
tgctgcatgctggagactgtgactagatggcacagtgacagagtcatatatgagaaggaa
tgtggcaactatccaggcttcctaactatattacgagcaactggatttgatggtggaaat
aaagctgatcaattggattatgagaatttcagacatgtagtacacaaatggcactataaa
ttaactaaggcttctgtacactgccttgaaactggtgaatatacacacatcagaaatatc
ctgattgtgctgaccaaaatccttccatggtatccaaaagtgttgaacctgggccaagcc
ttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacctgatctatat
gcattggctatgggctattctgggcagttgaaaagtaggaagccttttatgatacctgaa
aatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaat
gggccaggtggtgctgggatgcctacatctctcacaataaatacagcgaaactggaggaa
aacgctgctgaagagactgataaactaaaggagaagtctcagggtactgtgaaagtcatt
aataaaactgtcaatgctacaccgaaggtgacaacaagcaatggaaacagtgcttctaac
agcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggaaaaagataaagaa
aagaaagaaaagattccagctaccactccagagacgaaggcacttgggaaggatgggaaa
gataaaccaaaggaagaacgggcaaataaagatgagaaaccaagagagattaaggagaaa
acaccgaaatctgacaaagagaaggagaaggccaagaaagaagaaaaagcttcaaaggaa
gaaaaatccaagacaattgttaccaccattgagtcaaagtcagttgcagaaaaggagaga
gaaaaggagccatccagagaaaaagatgtagcaaaggatatgaaatccaaggaaaatact
aaaggaggagaaaagattccagtagctgggtccttgaagtctcctgttccccgatcagaa
acatcagaatgtgagagggaacaaaaacgccgcaaagttgatatccattcttctccatca
cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcaacaaagcactac
attaaccacactactccaacactgtccaagagtaaagagagagaagtggacaagaaagac
ttggacaagtcaagggaaagatccagagagagagagaagaaagaggaaaaggacaggaaa
gatcgaaaaagggatcattccaacagtgaccgagaggtgccacaggattcaactaaacga
cgcaaggaagaaaatgggacaacaggttcttcaaaacatagtagcgaaagtccttctgat
tctcctcgttcaaatgaaaaagagagggagaagagcaaatcaaaatcttcaggaaaagaa
aaaggtgattcaattaaagcagaaaagatggagaagagctcctctggtagcaaaaaggaa
tcaagacatgacaaagaaaaagaaaagaaagaaaaacgagacagcactggagggaaagaa
gaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system