Meleagris gallopavo (turkey): 100542264
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Entry
100542264 CDS
T01523
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100542264 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgp03400
]
100542264 (MSH2)
DNA repair and recombination proteins [BR:
mgp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100542264 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
100542264
NCBI-ProteinID:
XP_010704792
Ensembl:
ENSMGAG00000005134
UniProt:
G1N0T4
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Position
2:complement(8351488..8377047)
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AA seq
884 aa
AA seq
DB search
MMNTLKHLTSPLSPPSTFLSIGNQKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGS
KSVKENDWYLAYKGSPGNLAQFEEVLFANNDMSMAIGVVGVKLSSADGQRVIGVGYVDTT
LRKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGDTAGEMGKLRQVIQRGGILITDRKK
ADFTTKDIVQDLNRLLKSRKGEQMNSAALPEMEKQVAVSSLSAVIKFLELLSDDSNFGQF
ELTTFDLSQYMVLDNAAVQALNLFQSSVENANNTQSLAGLLNKCRTPQGQRLVNQWIKQP
LMDKNRIEERLNLVEAFVEDTELRQGLQEDLLRRFPDLNRLAKRFQRQAATLQDCYRMYQ
AINQLPNVVQALEKHEGAHQMLLLAVFITPLNDIHSDFSKFLEMIETTLDMDKVENHEFL
VKASFDPNLTELREKMNELEENMQTLLKSAAKELGLEAGKSIKLESNSQFGHHFRITCKE
EKVLRNNSKYKITDTQKNGVKFTNSKLSAINEDYIKNREEYEEAQDAIVKEIINIASGYA
EPIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVVLEKGQGRIVLKGARHPCIEVQDEVA
FIPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCIL
ARVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEY
IASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKAGVCDQSFGIH
VAELAAFPKHVIENAREKALELEEFQDLGRPKESEGEPAAKKCYREREEGEKIIQDFLCQ
VKALPLTDMSEEDIKTKLKQLRADVLAKNNSFVNEIISRTKVTP
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacactgaagcatcttacaagtcccctctcccctccctctacttttctttcc
ataggaaatcagaaactggagagcgttgtgctcagtaaaatgaactttgaatcttttgtg
agagatttgctgctggttcgtcattacagagtggaagtttacaagaataaagcagggagt
aaatctgtcaaagagaacgactggtatttagcatacaagggttctccgggaaatcttgcc
cagtttgaggaagttctctttgccaacaatgatatgtcaatggccatcggggttgtgggg
gtgaagctgtcttctgctgatggacaaagagtaataggagtagggtatgtggacactacg
ctgagaaaactgagcgtctgtgagttcccagataacgatcagttctcaaaccttgaagcc
ctgctggttcagctaggacccaaggagtgtgtgctgccaggaggagacactgcaggagag
atggggaaactgcggcaggtcattcagagaggaggaatcctgattacagacagaaagaag
gcagatttcacgacaaaggatattgttcaggatctcaatcgcttgttaaaatcgagaaaa
ggagaacaaatgaatagtgcagcattgccagagatggaaaagcaggttgctgtttcatct
ttgtcagccgttatcaagtttttggagttgctgtcagatgactctaactttggacaattt
gaactgactacttttgatcttagtcagtatatggttctagacaatgcagctgtccaagcc
ctcaacctgttccagagttctgtggaaaatgctaataatacacagtctctggctggttta
ctaaataaatgcagaacccctcaaggacaaagactggttaatcagtggatcaaacagccg
cttatggacaagaatagaattgaagaaaggttgaatttggttgaagcctttgtggaagat
actgaactgcgtcagggccttcaagaagatcttctgcgccgcttcccagatcttaatcgg
ctagcaaagagatttcagaggcaagcagcaaccttacaggactgttaccgaatgtatcaa
gctattaaccaactgcctaatgttgtacaggcactagaaaaacacgaaggagctcaccag
atgttgttattggcagtgtttataacacctcttaatgatatccactccgacttctcaaaa
tttctggagatgatagaaacaacattggatatggataaggtggagaatcatgagttcctt
gttaaggcttcttttgaccccaacctgacagaactgcgagagaagatgaatgagctggaa
gaaaacatgcagaccttattaaagagtgcagccaaagagcttggtttggaagctggtaaa
agtatcaaattggagtcaaattcacagtttggacaccactttcgaattacttgcaaggag
gaaaaggttcttaggaacaattcaaagtacaagataactgatacacagaagaatggtgtg
aaatttacaaacagcaagctgagtgccatcaatgaggattacataaagaacagagaagag
tacgaagaggctcaggatgcaattgttaaggaaattattaacatcgcttcaggttatgca
gagccaatacagaccatgaatgatgtaatagctcagttagatgcaattgtcagttttgct
cacgtgtcaaacggagcgccagtgccgtatgtccgtcctgtcgttctggaaaaggggcaa
ggaaggattgtgctgaaaggtgccaggcatccttgcatcgaagtgcaagatgaggtggcc
ttcatccccaatgatgttacatttgagaagggcaagcagatgttccacattattactggc
cctaacatgggtggaaagtcaacgtatatccgacagacaggagtcattgttcttatggcc
caaattgggtgctttgtaccatgcgactctgcagaaataaccattgtggattgtatcctg
gctcgtgtaggagctggagacagtcagctgaaaggtgtgtctactttcatggctgaaatg
ttggaaactgcttcgatccttaggacagcatctgaaaactctctgataattattgatgag
ctgggaagaggaacttcgacctacgatggctttggcttggcgtgggctatttcagaatac
attgctagcaaaatttgtgctttctgtatgtttgctacacacttccatgaactgacagct
cttgctgatcaagttccaacagtaaataacctacatgttactgctctaaccagtgacgac
acactgacaatgctgtatcgtgtcaaggcaggtgtttgtgaccagagttttggaatacat
gtagcagagttggcagctttcccaaaacatgtgatagaaaatgcaagagagaaagcactg
gagctggaggagtttcaagaccttggcaggcccaaggaatctgaaggagagccagcagcc
aagaaatgctacagagaaagagaggaaggcgaaaagatcattcaggattttctctgtcaa
gtgaaagcattgcccctgacagatatgtcagaagaagacatcaaaaccaagctgaagcag
ctgagagctgatgtgttggcaaagaacaacagttttgtgaatgaaatcatttccagaaca
aaagttactccatga
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