Meleagris gallopavo (turkey): 100542448 Help Entry 100542448         CDS       T01523                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism mgp  Meleagris gallopavo (turkey) Brite KEGG Orthology (KO) [BR:mgp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mgp03021]     100542448 (SETX) Enzymes [BR:mgp01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      100542448 (SETX)     5.6.2.5  RNA 5'-3' helicase      100542448 (SETX) Transcription machinery [BR:mgp03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      100542448 (SETX) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 Viral_helicase1 UvrD-helicase AAA_22 AAA_16 Helicase_RecD SAS4 nSTAND3 RNA_helicase Motif Other DBs NCBI-GeneID:  100542448 NCBI-ProteinID:  XP_010719235 Ensembl:  ENSMGAG00000005934 UniProt:  G1N2P3 LinkDB All DBs Position 19:complement(6317923..6347113) Genome browser AA seq 2788 aa AA seqDB search MNVCRWCTPSGLDATEYLKSYASKQLSPEDLEGSNDDLCYCLECVVEYHKAREKLPSLHQ VLLELETSRLIAHIEKSVREEAGEDDELFIVDENGETQLPVYVGPDFENNLRVPLLEVLK YPYLLLHEKVSELCVEVLCRMEESRTSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYRSSVIEKGKLILLPSHLYDNTNYKNYWL GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMEKEADDDSTDPFWPALHCFMVILDQ LGSKVWGQLIDPVQAFQTIINSMSYKNEIKNIRNSFIRTKSELKTDYGDEMVTCSQIVYT YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHDSTFLWFIPFVQSL MDLKDLGVAYIGEVIHYLCSEIKDILNERIQRCDKVSEFFLLILVSIIELHRNKKCLHLL WISSQEWVEAVVRCAKLPAIAFTRSTEKAAGSYARGSSTISLQASNSVQHACVQLIRSLL REGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLNIQETQELQICLKQMIRNLKSRAVNVS ASVENNANSTALPTVSLKQEKSAPGDGYKMSVHGRENLCSPVAFISKEGEDGRCQDNSFA GRNSAWEEDCKDSSKNSKSLTSTDCLLVNIKKEPKDLITQECKCLQKSFAKETHGKVQEN RNSDLMSGNCDVGYQGFNTSIQSSNSRRSGVLENKQEAEAVSPMYLSAQTSVDSPQHVYS SDVKGRKVSPSSSSEFKEDVHTLGHLHFQTHNTEGHSRLLTQIADLKNCGSAISASEAEQ PVFCTGSSCMRKDCCKHQGVNAVGENEDRELANISRSSESTWEKSAFKYGLVSNNQEQKE MPLDCFSFAKNQPGMQGNKDNSILLANISDTALQNVSTKDDSSLLLKSVCLKDQEQPNLR DLVKCDRKSQISKTSCTVKNSVSGYVPSSFENKGDMSNTALPVSPVAIKCESSERLIVCS KYFKRENGSEGKEEEDSVRMVSGDNTLTNSQLDKDLSKLSLAAYAKSVNFPSQSSQESSM HNNTCDVKRKVKSAVRSSNDAQSNQTLCDTDSHGNKIIVILDSSDEENSVTVKEKTKEIN ENTCPEKQPLSEMQHDVTDSESESKMPNSPLPLEDCDSQYFEFETEVDVFSVWQDTQEYK QDCPSTSVGSSHSDGLLKDHTNEWGYDTDYVSDDAMEKGTNWTGEEINTSHQKETDNTEV TSSALQEFSAKENVKDELENSTDKTTVDKDLIPNADLTEPRASTSNISLASKLALKKSTL SPHKNIAKSKVARTIQRSPKATALNTTQTKKLLQSTLKKIHPGRTTPAVVPPKKARQCPA PTSTVEKLGLKKAPRKAFDLSQRSLDSLAQLRSYGKVAGKVGVAQRGKLKRTAHPSLSTQ INKKMLACQDLQFLKQTRLSKTVRVKNISRGSEDRSKKASTTDTKSVKQKAKRLDEPSVE KQGEEKTGETFYPSERERITSVSVEEAVQTTLVSSCSDSSKAKDCDVMIPPALMDSSPCS AAVVGDAKGKPEEGCIVQPEFGMTASKENECKPDENSDDDDLFLTQLDPVDMELCSQDED AKDGSIATTRTEEMEIDSTESLQQNEPLTVVKCKYKDCTEKVEKIGDCCSKHSATSSESD HLFAKPSSLPPRKPSTTKIFSSVSSSRNAAFSKDLENVEKQPQALKSRASVAKPAALRPP SEKATSTRNQTCKTPSSSKIPQPQISNNVLQPRNTQSNNASNISRRPVRAEHSSSFLGAQ QHDHNIFVKEVLKWTYEMFANSMQFGPPNTLLQSVVASVPIRFQGYNDYFNTFFPLMMLN AFETLAQEWVENQKMKDKTYCFYLQNFCADLNTAEFIGYFEENDLTKQLHPKEDDLIFLV GQKKDAFGEDRELEDHLVNHVGLVRRFSRASGCLTRQMEHIVCHLSVQTRGNLSFFINNQ VKCVVVGSLVPTQRSFKGLLLLSRSPLAKPIINPSYSDFCPRDLPVASENATFSMSEYNE DQKRAIETAYAMVKQHPGLAKICLIHGPPGTGKSKTIVGLLSRVLSENTRTEKTSKKNAR MKQSRFLVCAPSNAAVDELMKKIIIAFKEKCQNKQEPLGNCGDIKLVRLGAERSINSEVR AFSLDKQVEHRMKRKPTDRDQDIQKKKAALDEKLDMLSRQRAMHRCEKRESQMLDDEIGR LSKERQQLASQLKEVRGHSQKVQTDIILESDIICCTLSTSGGGLLESAFWRQGLDPFSCV IVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMARLQRHLE DQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYVYGRTLKTDKATEENRCSSEWPFQPYL VFDVGDGREERDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRRIGIITPYSAQKKKIQEE LDRVFKNNSPGEVDTVDAFQGREKDCIIVTCVRANSSKGSIGFLASLQRLNVTITRARFS LFILGRLKTLMENKDWNELIQDAQRRGAIIKTSDKSYKKDALKILKLKPTPQNPPCQLPT KAGTTKAPLAEAASSSRKVGEPANPREASRPRELGAGSGHAVPQGTQVADSRRASISAPV EAAALPADKEKPRDPRLASMASRTETKGKEQDPKHSSQSAHRSRESTLQQRLDASSAARD RISRTEPSRKHQQTKGQCDMPSTSPYAAKLEGDRRAQLPERHSKASSERGQCNSSKWNKD PRTSMRRTSESSSVSTDSSSAKRRRTSH NT seq 8367 nt NT seq  +upstreamnt  +downstreamnt atgaatgtatgtcgatggtgtacaccaagtggtcttgatgccactgaatacctgaagagc tatgcttctaaacagttgtccccagaagatcttgaaggttccaacgatgacctctgttac tgcttggagtgcgtggttgaataccacaaagcaagggagaaattgccaagtttgcatcag gttttattggaattggaaacctctcgtctcatagcccacattgaaaaatccgtaagagaa gaagctggagaagatgatgaattgtttatagtggatgagaatggagagacacagctgcct gtttatgttggcccagattttgagaataacctgagagtgccacttctagaagtgctgaaa tacccgtatctcctgctgcatgagaaagtcagtgagctttgtgtagaagtgctatgcaga atggaagaaagtcgcacctcctttcaggtttttgagaaatacccaggaatttatctattt ttggtacacccaaatgaagtgattcgtcgttgggccatcctaacagcaaggaatttaggg aaggttgacagggatgattactatgacttacaggaagtgttgacttgcttgtttaaagta attgaactggggctttttgagagtccagatatttacagatcttcagtgattgaaaaggga aaactcattcttctgccatcccatttatatgataataccaactacaagaactattggcta ggcatttgtatgttgctaacagtgctggaagaacaagctatggactccttgttactgggc ccagacaaacagaatgacttcatgcagtctatacttcacaccatggagaaagaagcagat gatgattccactgaccccttctggccagcgctgcattgtttcatggttattttggatcag cttggatctaaagtatggggtcagcttatcgatcccgtccaggcctttcaaacaattatc aacagtatgagctataaaaatgaaataaagaatatacgcaatagctttataaggacgaaa tctgaattgaagacagactatggtgatgaaatggttacttgcagtcaaattgtatatact tataacacagaaaagcctcaaaaggacactgggtggaaaactgctatttgtccggactac tgccccaacatgtatgaagatatgcaaacactggctaatgtgcttcaatctgatattggc agagatatgcgtgtccatgacagcacgtttctgtggttcatcccttttgttcagtcacta atggatctcaaggacttgggcgtggcatacataggagaggtcattcactacctctgttcg gaaatcaaggatattctcaatgaaagaatccagcggtgtgacaaagtttctgaatttttt ctgttgatcttggtgtcaattattgaactacacagaaacaaaaagtgcctgcatttgctg tggattagctctcaagaatgggtggaagcagtggtgagatgtgctaagcttccagcaatt gcatttactcggagtactgaaaaagcagctggcagctatgcaagaggttcatcgacaata tctttacaggcttctaactctgtgcagcatgcttgtgtgcagttgatacgcagccttctt agagaaggctatcagatcggtcagcatgcactatgcaagcaatatttagacaaactcaat ctccttctgcgaggaaatctatctttaggttggcagctgaacatccaagaaactcaggaa ttacagatatgcttaaagcagatgataagaaacttaaagagcagagcagtgaatgtgtct gcatctgtggaaaacaatgcgaactctacagctttacccactgtttctttgaagcaagag aagagtgcacctggtgatggttataagatgagtgtgcatggcagagagaacctttgttca ccagttgccttcatatcaaaggaaggtgaggatggacgttgtcaagataactctttcgct ggcagaaatagtgcctgggaagaggattgtaaagattcatctaaaaattcaaaatctttg acctctacagactgcctcttggtaaatattaaaaaggagcctaaggacttgataactcag gagtgcaaatgcctgcagaaatcatttgcaaaagaaacgcatgggaaagttcaggaaaat aggaacagtgatcttatgtcagggaactgtgatgtgggttatcagggctttaatacaagt attcagagttcaaattctagaagaagtggagtgttggaaaacaaacaggaagcagaagcc gtatcaccaatgtatctatctgctcaaactagtgttgattctccacagcatgtttacagc tcagatgtaaagggaagaaaagtgtctcctagttcctcttcagagtttaaagaagacgtg catacacttgggcatcttcattttcagacacacaatactgaagggcactctagactatta actcaaatagcggatttgaaaaactgtggttctgcaataagtgcttcagaagcagagcaa cctgtgttttgcactggtagttcgtgtatgaggaaagactgttgcaagcatcagggagta aacgctgtgggtgaaaatgaagacagagaattagcaaatatttcaaggagttctgaaagt acgtgggagaaaagtgcttttaaatacgggctggtctccaacaaccaggaacaaaaagag atgccacttgactgcttcagctttgctaaaaatcaacctggcatgcaaggaaacaaagat aacagtattttgcttgcaaatattagtgacaccgcactgcagaacgtatccaccaaagat gactcaagtttgttgttgaagtctgtctgtcttaaagaccaagaacagcctaatttaaga gacctagtgaaatgtgaccgtaaaagtcaaatttcaaagacatcctgtacagttaaaaat tcagtgagtggttatgttccatctagctttgaaaataagggagatatgtccaacactgct cttccagtcagtccagtagcaatcaaatgtgaatcaagtgaaaggttgatagtatgctca aaatatttcaagagagaaaacggttcagaggggaaggaagaggaggattctgtgaggatg gtttctggagataatactttaacaaactcccagctcgataaagatctcagtaaattgtcg ttagctgcttatgccaaaagcgtcaattttccgtcacagtcaagtcaggaaagttcaatg cataataatacatgtgatgttaaaaggaaagtgaaaagtgcagtaagatcctccaacgat gcccagagtaaccagactctctgtgatacggatagccatggcaataaaatcattgtaatt ttagactcttccgacgaagaaaacagtgttactgtcaaggagaaaacaaaagaaattaat gaaaatacgtgtcctgaaaagcaacctttatcagaaatgcagcatgatgttacagatagc gaatcagaatcaaagatgccaaactctcccttgccacttgaagactgtgactctcagtac ttcgagtttgaaacagaagttgatgtcttctcagtttggcaagatactcaagaatataaa caagactgtccttcaacatcagttggtagcagtcattcagatggcttactgaaggatcac acaaatgaatggggttatgatacagattatgtaagtgatgatgccatggaaaaaggaaca aactggacaggggaggagataaatacttctcatcagaaagaaactgataatacagaagta actagttcagctttgcaagaattttctgctaaagaaaatgtgaaagatgaactggagaat tctactgacaaaactactgttgataaagacttaattccgaatgcagatttgacggaaccc agagcttctacatccaatatctcattagcttcaaagctggcacttaagaaaagtactctg agcccacataaaaatatagctaaatctaaggtagcaagaactattcagagaagtcctaaa gcaacagctctgaatacaacgcaaactaaaaaactacttcaaagtacattaaaaaaaatt catcctggcaggacaacgcctgctgttgttcctccaaagaaagctcggcagtgtcctgca ccaacatcaacagtggaaaagcttggtctgaaaaaggcaccccgcaaagcatttgattta tcccagcgctctttagatagtctggctcaactgcgtagttacggtaaagttgcaggaaag gttggagttgcacagagggggaaacttaaacgaactgctcatccgagtttatctacacaa attaacaaaaaaatgctggcttgccaagaccttcagtttttaaagcagacaaggctcagc aaaactgttcgagtgaaaaatatttcaaggggttctgaggatagaagcaaaaaagctagc acaacggatacaaagtctgtcaaacaaaaggctaaacgtcttgatgaaccatctgtagag aagcaaggagaagaaaaaacaggagagaccttttatccgtctgagagagaacgtatcact agcgtctctgtggaggaggctgtgcaaactacacttgtctctagttgctcagactcaagc aaagcaaaagactgtgatgtaatgattcctcctgcacttatggattcaagtccatgttct gctgcagttgttggagatgctaaaggtaaaccagaagaaggctgcatcgtccagcctgaa tttgggatgacagcttcaaaagaaaatgagtgcaaaccagatgaaaacagtgatgatgat gatttatttttaactcagttagatcctgtggatatggaattgtgttcacaggatgaagat gctaaagacggttctatagctactacaagaacagaggaaatggaaatagatagcactgaa agccttcagcagaatgagcccttgactgttgtgaaatgtaagtacaaagactgtacagaa aaagtggaaaaaataggagactgctgtagcaagcattcggctaccagttcagaatcagat cacctgtttgcgaagccttcttccctgccaccaagaaaaccttccactactaaaattttc agctcagtaagttcttcacgaaatgcagccttcagcaaagatcttgaaaatgttgaaaaa caaccacaagctttaaaaagcagagctagcgttgcaaaacctgctgcgttgagaccaccg agtgaaaaggctacgtcaacaagaaatcaaacatgcaagactccaagttccagtaaaatt cctcagcctcagatttctaataacgttctccagccacgaaatacacagagcaacaatgct tcgaatatttccagacggcctgtccgagcagagcattcttcttcttttcttggcgctcag cagcacgatcataatatttttgttaaggaggttctgaaatggacttatgaaatgtttgca aactccatgcagtttggacctccaaatactctcctacaatctgtagtcgcctctgttccc atcaggtttcagggatacaatgactattttaatacgtttttccccttgatgatgctaaat gcctttgaaacactggcacaagagtgggtagaaaaccagaagatgaaagacaagacttac tgcttctacttacagaacttctgtgcggatttgaatacggcagagtttataggttatttt gaggaaaatgatttgacaaagcagctccatccaaaggaggatgacttaatctttctggtg ggccagaaaaaggatgcctttggggaagacagggagttggaggaccacctggtgaatcat gttggtcttgtgaggcgattttctcgtgcatctggctgcttaaccagacaaatggagcat attgtctgtcatctttctgtacaaactcgaggaaatttgtcattcttcataaataatcaa gtgaagtgtgtggtggttggctccttagtgcccacacagcgatcattcaaaggtctgcta ctactgagcaggagtcccttggctaaacccatcataaatccaagttacagtgacttctgt ccaagagatttgcctgtagcttcagaaaacgctacgttttctatgagtgaatacaacgaa gatcaaaagagagccattgaaacagcttatgccatggtaaagcaacatccagggcttgcc aaaatctgtcttatccatgggccacctggaactgggaaatccaaaactatagttggactt ttgtctcgtgttttgagcgagaacactaggactgagaaaacgagcaaaaaaaatgccagg atgaagcagagccgttttctggtttgtgcaccatccaacgctgcagttgatgaactcatg aaaaagatcatcattgcatttaaggaaaaatgccaaaacaaacaagagcctttgggaaac tgcggtgatatcaaattagtgcgactgggtgctgaaagatcaatcaacagtgaagtccgg gcttttagcctggataaacaagttgaacatagaatgaaacgaaagccaactgaccgggac caggatattcagaagaaaaaagcagctctggatgagaaactggacatgctctctcgtcag cgtgccatgcacagatgtgaaaagagggagagtcaaatgctagatgatgaaattggcaga ctttcaaaggagagacagcaacttgcttctcaactgaaagaggttcgagggcactctcag aaggttcagacagatatcatcttggagtctgatataatctgctgcacactgagcacaagc ggaggaggtctgctggaatctgctttttggcgacaaggactcgatcctttcagctgtgtc attgtggacgaggcagggcagtcctgtgaagttgaaacactgattccactgattcatcgc tgtaataaactcgtccttgttggagatcccaggcagctccctcccactataaaatcaata aaagctcaggaatatggctatggtcagtccttaatggcacgcctacagagacacctggaa gatcaagtgcagaataatcttctacgacgtctgccggttgtgcagctgaccgtgcagtac cggatgcaccctgacatctgccttttcccatccagttatgtttatggcaggactctaaag actgacaaagcaacagaagagaacagatgttcttcggagtggccattccagccctatctt gtttttgatgtaggagatggccgtgaggagcgtgacaaagactcttttagtaatccccaa gaagtgaaactggtgttagaaataattagaacaattaaagaaaaaaggaaggatctaggt cttcgtcgcattggaataattacaccttacagtgcacagaaaaagaaaattcaagaagaa ctcgacagagtgttcaagaataacagcccaggagaagtggatacagtggatgcatttcag ggacgagagaaggattgcatcatagtgacgtgtgtccgggcaaacagctccaaaggctcc attgggtttctggcaagtcttcagcgtttgaatgttacaattacccgagccagattcagc ctcttcatccttggaagactgaaaacactcatggagaataaagactggaacgagttgatt caggatgctcagagaagaggtgcaattatcaagacatcagacaaaagctacaagaaagat gcacttaagattctgaagctcaaaccaacaccacagaatcccccatgccagcttcccacc aaagcagggacaacaaaagctcctctggcagaggcggcttcttctagtaggaaggtaggt gagcctgcaaatccaagggaggccagcagaccacgggaacttggtgctggttctggccat gcagtgccacagggaactcaggttgcagactcccggagagccagcatctctgcaccagtg gaggctgcagcactccctgctgataaagagaaaccgcgggacccaaggctggcaagtatg gccagcaggactgaaactaaagggaaggagcaggacccaaaacacagcagtcagtcagcc cacaggagtcgagaatcaacgctgcagcagcgtctggatgcgtcctcagctgccagggat cggatttccagaacggagccttctaggaagcaccaacaaacaaagggacagtgtgacatg ccttccacgtcaccttatgcagctaaactagagggtgacaggagagctcagttgccagaa cgccattcgaaagccagcagtgaaagaggtcaatgtaatagcagtaagtggaacaaagac ccacgtacttcaatgaggagaacatcagagtcgtcatcagtgagcacagactccagcagt gccaagcgaagaaggacctctcactga

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