Meleagris gallopavo (turkey): 100542685
Help
Entry
100542685 CDS
T01523
Symbol
ALMS1
Name
(RefSeq) Alstrom syndrome protein 1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mgp03036
]
100542685 (ALMS1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mgp03037
]
100542685 (ALMS1)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100542685 (ALMS1)
Cilium and associated proteins [BR:
mgp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100542685 (ALMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
DUF6157
Motif
Other DBs
NCBI-GeneID:
100542685
NCBI-ProteinID:
XP_010708867
LinkDB
All DBs
Position
4:complement(64712554..64765413)
Genome browser
AA seq
2861 aa
AA seq
DB search
MEPGEEVEDEEEEQEQRVPPIATTPPRRTWREESLSQSSSETQASAASGISLGEAIRQRT
AAHQEIDSWYQLPAEVDASHLTAASETKLGLASDRNDLTEFPTLEEGVLSAAETSRRQNP
EDTVHGLLLDIQDSQLSPCLPLLMYSTPGQRILDETLFQQSEKDFIHLRGVPDVSGASEQ
NSNPLHIPEAVWLADVETPSDAPSDCCSLSQHPLSFRQTEPSDASYLSQQASHFSELLTN
KEASEDCKKDINEKASIPQMGDKAVNQTEASLVKQTCGTSTEDECFTCDNNVLAPVFELS
EKEKELLRRDEFSSSENSSCKTALTKNSGKGESEVQMGKVKMAESESEECLRPPERLEKE
KVPELDSSKTLSDDWKKDSGKGSGAQDVFSAKTSEIAGESKEHRVDLNDFGSMKFVAVTQ
EVQGAFLDREVKQGLREEELSPIVPSTSDSAPKQLVMTDMESPPSCSENAQVEVEPGVRK
AELTISDVSIERGHKMTEISPSLNFIVDDGSFFRHFSHPSYQSTPGILLNKNVRAELGAR
VIKSDVQASPLCLNENNSGKSSTSTPTSVEKQPSLQCAQKENKHFDFLKLKYPHTGRIQS
LPSLNFMEKVGTWNMSQPENMSDALASSDQGVISHRKKAYSAIASSANNILSMQNSSRNP
KDYITAPSGGTHSLENIHFHNKISEPVHPLTRSQSDNSVNVASKNNSQTDVVQPVNTEAM
QPLEGKSNVSGVPENKLGGSLIHQLTTEIASGSVDKGAEGSSVGQSSYPNSFISSERFAH
LIKEDGNSPTGDQKKCDGLKNQKLPRNLDIGHVSMDNFGDISPDSLNLPAHSGESSHGAL
GSPRCFPVVTKHFFTSAEDDDFISVGATTVLETPEKEELNIEERIPVYLRNLGIDQSPGT
ILTPFVPRGPIREVEFSPSDLRTLKGSTDTLTRTIQQPQGELLAAVDVIQTSFNSGTSTV
SISIPMNSETDSDTFSPRELSPRFSLPFREKPTSECTMLCHKIEVPAPLSTQLETECSAV
SKLAEPSQHLQSVSLDSHSNRESPVLVAKSVQDLLAKKESKNVNGSSQRWTASSLAGVKD
EKERGSQTSSAGREKNEGQESDSVIGSGVLQEIRKLLAEAENITGSWRDPVLSNASSRET
ESSPVQVEEDDTKDSELVKDSIPQFQKVVSWAESMNLSSIQEGSIPKPLDSCKDDLKWEH
SFDASLCSSEGAVEMTREFRTGKSVGRSEPEGCSSVTTDRNQPAVVAVAQSNANSELSTE
KPSKLGNSSPSEPRGSVINVPGSFQNKLSKANTAVSTAGGIQESSGSSSGDSLAARVKNL
LGNPLMPLGSTADISGGFQSMMSKTSAAGSKAGGVQESDGSSSRDSLVARVKNLLGNPSE
ASGSITNVPGGFQSILSKTSAAGSKAGGVQESDGSSSADSLSARVKSLLRDGTPLMPATP
ILRSADEEERRARAWVKLKLASRSEEAVLDLNEEDQQRIEEIKAELLLSAKRSGQAKGTR
SYSSEAATLYSCNQEADKEHSRASSDKRFHSDSQTQAFGTKELLEPSLQHVVPLYRAELS
DWCLLKNTQLKSLSTAEPPTCSQHQAVASSHSGCAGLHLPQQKQQDTRVAASDAQTEKVP
SPAQKKLSFLKSSEEMSKQITSITFSSRRRFQSPLTSVVLDGFFSGDDLDEIMPLEMDSA
TAEEQIHGKKHWERSETCPPSSPALAGSRSNEIAFPADKDRFHDVSPDGNRDGAYQETDC
LSGRESVAVYADERQTPSAKALDALSRDVTELGRHSARLLGLDCDRKFSQGMEGLHEPHS
ISSYQQEKSSPASRVQLCESLEGSDPAIQTDLPKDRGKLLEEEKRPSDAVPLIQKEVAGE
QIGVSQHPSPDEILSTESPSSPIKKVLSCVHITLSPKCNNSELRRDLNTENEMRLGGKLE
VNSQPVPLKTPEALLEAVPKLPTADLIPEDQRCSSFPVPSADPSVPSTAGQELPLHGSEK
LQAMNSGGCSLKNICNCTDPAKSRKSTSDATTQITTESPGKTTFSAEIYVNSQDTESSAH
QSSIQKAKEFPQNTTSSLNRTSSFPRQGAGQPLLLPYKPSGSAEMYYVPYQKTGAKMSSL
GSENSGSNDALPSGFPANVLGVQDDKPPDTTAIKQKEGVCSKRAKPKLAWAEEQVIAQEG
APEGSHHLKSVNTTHSVFKSAQFDLRHPVPMCENYLLSHSELSEDSSGVGHTGISSSTVI
QNWRKAHRHGRVLSAHRKKDGGREFFPLTAEADYSKNEDLNIDTSLSNETPREELLQRGG
REAEQMAASSQTSHLRENVVKDLPLRQRTHSAGSLDELWVKFLERQKRYQQHDFRHKGEL
TLVERLDRLARVLQNPIRYTLISAKSERNASEKTREVKEQKEIRLLEKSVAESTLENHSA
RFKERPRINSHERSFVELRKNRSGEKVTCHTNKISEHQQYLDTSSDTCSERRLSRELCTT
ISSTISESDAVTQTDIETTTQTEVSSSVSTIDTARLVRAFGHRKVQLSPRLSQLYRTIHQ
QKSRSEKWDEEGSRARGVEHPKVTSERHRKQKETQKALDQALTSSGSWGPSSALSNKRRA
RMLNKAIQAGDLEIVNGATKKNTRDVGVTFPTPRSIQSNQRPRDPWHRVDGIFGESDGVV
TDHQAAGSKGISWFVQAEDLRFESRKENCSNSIPGPGSSWFEPFTTTKPWREPLREKNFQ
ELQCSRMTQPAVPGRDAETRPIQPFVKLTLQEALAVHRPDFICRSGERVKHLKLIMEERR
MQSALQSEREELFNPPEKRKGYRNASHVLADRGYLIKEKRRAIPKSEMVQRSKRIYEQLP
EVQKKREEEKRKSEYNSYRLKAQLYKMKITNRVLGRKVPWN
NT seq
8586 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggagaggaggtggaggatgaggaggaggagcaggagcagcgggttcctcct
attgcaacaactccgccacgccgcacttggagggaggaatccttaagccaaagcagcagt
gagacccaggcctcagctgccagtgggatctccctgggagaagcaatacgtcagagaaca
gctgctcatcaggaaattgactcctggtatcagcttccagcagaggtggatgccagtcat
ttaactgctgcctcagagacgaagcttggcctggcttctgatagaaatgacctgactgag
ttccctacattggaggaaggagtattgtctgcagcagaaacatcgagaaggcagaatcct
gaagatacagtgcatggcttgctgctggatattcaggacagtcagttatctccctgtctt
ccgttgctgatgtattcaacaccaggccaaaggattttggatgagacacttttccagcaa
tcagaaaaggatttcattcatttaagaggagttcctgatgtttctggtgcttccgagcag
aattcaaatcctttgcacatcccagaagctgtctggctggcagatgttgaaacgccctct
gatgctcccagtgactgctgctccttgtcccagcatcccctttcattcaggcagacagaa
cctagtgatgccagctatttgtctcagcaagcctctcatttttctgaactacttacgaac
aaggaggcgagtgaagactgcaaaaaggatatcaatgagaaggcatcgatcccccagatg
ggtgacaaagcagtgaaccaaacggaggcttcacttgtaaagcagacctgtggtacttct
acagaagatgaatgttttacttgtgacaacaatgtgctcgctccggtttttgagctttca
gagaaggaaaaagagttactgaggcgtgatgagttctcatcttctgaaaactcctcttgt
aaaacagccttgacaaagaattcaggaaaaggtgaaagtgaggtgcaaatgggaaaggta
aaaatggctgagagtgagtcagaagagtgcctgagacctccagagaggctggagaaagaa
aaagttcctgagcttgattcttctaagacgttatctgatgattggaagaaagacagcggt
aaaggttcaggtgcacaggatgtgttttctgcaaagacttcagaaatagctggagagtcc
aaggagcaccgagtggatttgaatgactttggaagcatgaagtttgtagctgttactcag
gaagtccagggagctttcctggatcgtgaggtgaagcaaggtttgagagaggaggagttg
agcccgattgtgccaagcaccagtgatagtgcccctaaacaacttgtcatgaccgacatg
gaatctcctccttcctgcagtgagaatgcccaagtggaagtagagcccggagttcgcaag
gctgaattaactatttcagatgtttccatagaaaggggacataaaatgacagagatttcc
ccttcacttaatttcattgtagatgatggctcgttctttagacacttctcccatccaagc
tatcagtctactccagggatacttttaaacaaaaatgtcagggcagaactgggtgctcgt
gtgatcaaatcagatgttcaagcctctcctttatgcctgaatgaaaacaattctgggaag
tcatctaccagtacacctacgtctgttgagaagcaaccttctctccagtgtgcccaaaaa
gaaaacaagcactttgacttcttaaaactgaaatatcctcacactggaagaattcagtcg
ctcccatcacttaatttcatggagaaggtgggcacttggaatatgagccagccagagaat
atgtctgatgcgctggcttcaagtgaccagggtgtaatttcacatagaaagaaagcctac
agtgcaattgccagttctgcaaacaatattttatcaatgcaaaatagcagcagaaaccct
aaagattatattactgctccttctggagggactcattccctggaaaatattcattttcat
aataaaatctcagagcctgtccaccctcttactaggtctcagtctgacaactcagtaaat
gttgcaagtaagaacaactcccagactgatgttgttcaaccagttaacacagaagcaatg
cagcctctagaaggaaaaagtaacgtttcaggagtgcctgaaaataaattaggaggctcc
ttgatacaccagcttacaactgagattgcttctgggtctgttgataaaggtgctgaaggt
agcagtgtggggcaaagttcatatccaaattctttcatttccagtgaaagatttgctcac
ctcatcaaagaggatggaaattctccaactggtgaccagaaaaaatgtgatggtcttaaa
aatcaaaaactgcctcgtaacttagatattggtcacgtcagcatggacaattttggtgat
atttccccagatagtctgaaccttcctgctcattctggggaaagcagccatggggccttg
ggctccccacggtgttttccagtggttaccaagcacttcttcaccagtgcagaagatgac
gactttatctctgtcggagcaaccactgttttggagactccagagaaagaagagcttaat
attgaagaaaggatccctgtctaccttcgcaaccttggcatcgaccagtcacctgggact
atactgactccttttgtaccccgaggaccaatcagggaagttgaattttccccttcagac
ctcaggacgctgaagggctccactgacacgctgacaaggaccattcagcagccacaaggt
gaattgctggcagcggttgatgttatacagacgagtttcaactctggcacttccactgtc
agtatttctattccaatgaattcggaaactgattctgatactttttcacccagagaactc
tctccccgcttctcattaccttttagagaaaaacccacgagtgagtgcactatgttgtgc
cacaaaatagaggtacctgctcctctttccacgcaactggagacagaatgttcagctgtc
tccaaactagctgagccaagccagcacctgcagtctgtttcacttgatagccattctaac
agagagagccccgtgcttgttgcaaaaagtgttcaggatctgctagctaaaaaggaatcg
aagaatgtgaacggaagctcacagagatggactgccagttctttggctggagttaaagat
gaaaaggagagaggatcgcaaacttcaagtgcagggagagagaaaaatgagggtcaagaa
agtgattctgtgattggatctggtgtattgcaagaaatacgtaaacttctggcagaggca
gagaacataactggcagctggcgtgaccctgtcctttccaatgcatcttctagagaaact
gagtcttccccagtgcaggttgaggaggatgacaccaaggattctgagttagtgaaagac
agcatccctcagtttcagaaggtcgtgtcatgggctgagagtatgaacctaagtagtatc
caagagggatcaataccaaagcctctggattcttgcaaagatgatttaaaatgggaacat
tcttttgatgccagtttgtgcagttctgaaggcgcggtggagatgaccagagagtttagg
acaggaaaatctgtaggaaggtctgagccagaaggctgtagcagtgtaactacagacaga
aaccaacctgctgttgtggctgttgcacaaagcaatgcaaatagtgaactcagcactgaa
aaaccttcaaagttggggaattcctctccatcagagcctcgaggaagtgtcatcaatgtc
ccaggaagcttccagaacaagttatctaaagctaatactgctgtaagcacagcaggaggc
atacaagaaagcagtggcagtagcagtggagattcgttagctgcccgtgtgaaaaacctt
ctggggaatcctttgatgcctttaggcagcactgctgatatctcaggaggcttccaaagc
atgatgtcaaaaacaagtgcagctggaagcaaagcaggaggcgtgcaagagagcgatggc
agtagcagtagggattcactagttgcccgtgtcaaaaaccttctggggaatccttcagag
gcttcaggcagcatcaccaatgtcccaggaggcttccagagcattttgtcaaaaacaagt
gcagctggaagcaaggcaggaggtgtgcaagagagcgatggcagtagcagtgcagactct
ctatctgcccgtgtcaaaagcctgctgagagatggaacacctctaatgcctgcaacacca
attctgaggagtgccgatgaagaggagaggagagcacgagcatgggtgaaactaaagctg
gccagccgatctgaggaagctgtgttggacttgaatgaagaggaccaacaaaggatagag
gaaataaaggcggaactgcttctgagtgccaagagatctggacaagccaagggtacacgg
agttacagttcagaagctgctactttgtatagctgtaatcaagaagcagacaaagagcat
tccagagcttcaagtgacaagagatttcattctgacagccaaacacaagccttcgggact
aaggagcttttagagccaagcttgcaacacgttgtgccattatatagagctgaactttca
gattggtgtctactgaagaatacccagcttaaatccttaagtactgcagaacctcctact
tgcagccaacatcaggctgttgcaagtagccattctggctgtgctggccttcatctgcca
cagcagaagcagcaggacacacgtgtggctgcttctgatgcacaaacagaaaaggtccct
tcaccagcacagaagaagctgtcttttctaaagagctccgaagagatgtcaaagcaaatc
acatccatcaccttttcatcccgaaggcgttttcagtcaccgttgacttccgtggtactc
gatggcttttttagtggagatgatcttgatgagataatgcctttggagatggattcagct
actgctgaggaacagatccatggcaaaaagcactgggagagatctgagacctgtcctcct
tcaagtccggctctcgctggctcacgatctaatgaaattgcatttcctgctgacaaagac
aggtttcatgatgtctctcctgacggtaacagagatggagcttatcaagaaacagactgt
ttgtcaggtcgggagtctgtagctgtctatgctgatgagagacagactcctagtgcaaaa
gctcttgacgctctgtctcgagatgtgactgaattgggcaggcatagtgccagacttctg
gggcttgactgtgatagaaaattcagtcaaggtatggaggggcttcatgaaccccattct
ataagctcttatcagcaggagaaaagcagccctgccagccgtgtccaattgtgtgagagc
ttagaaggttctgatccagccatacagactgatttgccaaaggaccgtgggaagctgttg
gaagaagagaaacgtccttctgatgcagtgcctctcattcagaaagaagttgctggagaa
caaattggtgtgtctcagcatccatctccagatgagattttatccactgagtctccttca
tcaccaattaagaaagtactgtcttgcgtccacataactctttccccaaaatgtaataac
tcagagctgcgcagggacttgaatactgaaaatgagatgagactgggaggtaaacttgaa
gtgaattcgcaaccagtgcctttaaaaactccagaagctttattagaagctgttcctaaa
ttacccactgctgaccttattccagaagatcagagatgctcatctttcccagtgccttca
gcagacccctctgttccaagcactgcagggcaggagctgcctttgcatggcagtgagaaa
ctacaggctatgaattcaggtggttgcagtctgaagaatatctgcaactgcacagatcct
gcaaaaagcaggaaaagcacttctgatgctaccactcagataacaacagaaagccctgga
aaaacaaccttttcggcagagatctatgttaattcacaagacactgaaagttctgcccat
cagtcttcaatccagaaagcaaaagaatttccccaaaatacaacttcatctcttaacagg
acttcctctttcccaaggcagggtgcaggtcagccgttactgctgccatataaaccttct
ggaagtgccgagatgtattatgttccttatcaaaaaacaggagccaaaatgtcttcactt
ggatcagaaaacagtggatcaaatgatgctcttccctcagggtttccagcaaatgtgctt
ggtgtacaggatgataagcctccagacactacagctatcaagcagaaagagggagtctgc
tctaagagagccaagcccaagcttgcctgggctgaggagcaagtgatagcacaggagggt
gctccagaaggaagtcatcatttaaagtcagtgaacaccactcactcagtcttcaagtct
gcgcagttcgacctccgccatccagtgcccatgtgtgagaactacctcttatcccacagc
gagctgtcggaggattcttctggtgtgggacacactggaatttcctccagcactgtcatt
cagaattggaggaaggcacatcgacacggacgtgttttgtccgcccaccgtaagaaagat
ggcggacgtgaattcttcccactcactgcagaagcagattatagcaagaatgaggatcta
aacatcgatacatctttgagtaatgaaaccccaagagaggagttgcttcagcggggcgga
agggaagcagaacaaatggcagctagtagccaaacgagtcaccttcgtgagaatgtcgtt
aaagacctgcccctgagacagagaacccactctgctggtagcttagatgagctctgggtt
aagtttttggagcgccagaagagataccagcagcatgattttcggcataaaggtgagctg
acccttgtcgaacgcctcgatcggttagccagggtccttcagaaccccatcaggtataca
ctgatatcagcaaaatcagaaaggaatgcttctgaaaaaacgagagaggtaaaagagcag
aaggaaataagactgctggagaagagcgtggctgaaagtaccttggagaatcattcagca
cgttttaaagagaggccacgtatcaactctcatgaaagaagctttgttgagcttaggaaa
aataggtcaggagagaaagttacctgccacacaaataaaatttcagaacaccagcagtat
ttggacacttctagtgacacttgctcagagagaaggcttagtagagaactctgtaccaca
atcagttccaccatctcagaatcagatgcggtaacacaaactgacatagaaactacgact
cagactgaggtgagcagttctgtttccaccattgacactgccagactggtcagggctttt
gggcacagaaaggtgcagctgtcaccaagactctcccagctttatcgtaccatccaccag
cagaaaagccgctctgaaaagtgggatgaggaaggcagcagagcgaggggtgtagaacat
ccaaaggttacttctgagagacacaggaaacagaaggagacccagaaggcattggatcaa
gctttgacaagcagtggttcctggggaccaagctcagctctcagcaacaagcgacgcgca
cggatgttaaacaaagctatccaagcaggagacttggagattgtgaatggtgcaacgaag
aaaaacactcgagatgttggtgtgacttttcctaccccaagatctatccagtcaaatcaa
cggccgcgggatccctggcatcgtgtcgatggtatttttggagagtcagatggtgtggtc
acagatcaccaggcagcaggaagcaaggggatttcatggtttgtccaagcagaggatttg
aggtttgaatctaggaaagaaaactgttccaattccatccctggtcctggttcatcttgg
tttgaacccttcaccaccacaaagccctggagggagcctctgagagagaagaactttcaa
gagctgcagtgcagcagaatgactcagcctgcagttccaggaagagatgctgagaccagg
cccatccagccatttgtgaagcttacgctacaggaggctcttgcagtgcatcgccctgat
ttcatctgccgctctggtgagcgcgtgaagcacctgaagctcataatggaggagaggaga
atgcagagtgcactgcagtctgaacgagaagagctttttaatcctccagagaaaaggaag
ggctacaggaatgcaagtcacgtgctggctgacagaggttatctgattaaagaaaagaga
agagcaattccaaagagtgagatggttcaaaggtctaaacggatctatgagcagctgcca
gaggtgcagaagaagcgagaggaagaaaaaagaaaatctgagtacaactcatatcgcctg
aaagcacagctgtacaaaatgaaaatcaccaaccgtgtcttagggaggaaggtaccctgg
aactga
DBGET
integrated database retrieval system
