Meleagris gallopavo (turkey): 100543273
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Entry
100543273 CDS
T01523
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100543273 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100543273 (DDX6)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100543273 (DDX6)
Enzymes [BR:
mgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100543273 (DDX6)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100543273 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
100543273 (DDX6)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100543273 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
100543273
NCBI-ProteinID:
XP_003212776
Ensembl:
ENSMGAG00000004123
UniProt:
G1MYA1
LinkDB
All DBs
Position
26:complement(5614987..5629859)
Genome browser
AA seq
483 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVED
EKQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcagaacgggcag
ttgagaggccctgtgaaacccagcgggggcccaggaggtggaggcacacagactcagcaa
cagatgaaccagctgaaaaatgccaacacaattaacaatggcacccaacagcaagcacag
agtatgaccaccactattaaacctggcgatgactggaagaagactttaaaactccctcca
aaggatttgagaatcaaaacttctgacgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaacgggagttgctgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggaaagcatccccattgctttgtctggtagggatatcttggctagagcg
aaaaatggaacaggcaagagtggagcctacctcattcccttacttgaacggctagactta
aagaaggacaacatacaagcaatggtgattgttcccacccgtgaactagccctgcaggtc
agtcaaatctgtatccaagtcagcaaacatatgggaggtgccaaagtgatggcaacaaca
ggaggaaccaatttgcgagatgacataatgaggcttgatgatacagtgcatgtggtgata
gctacccctggaagaattctcgatctcatcaagaaaggagtagcaaaagttgagcatgtc
cagatgatagtattggatgaggcagataagttgctgtctcaagattttgttcaaataatg
gaagacattattctcacgctacctaaaaacagacagattttgctctactcagccactttc
cctctgagtgtacagaagttcatgaattcccatttgcagaaaccctatgagattaatctg
atggaggagctgaccttgaagggagtcacccagtactatgcctatgtaactgagcgtcag
aaggttcactgcctcaatacgctgttttccaggctccagatcaaccagtcgatcattttc
tgcaactcctctcagcgggttgaattgctagccaaaaagatctcccagctgggctattcc
tgcttctatatccatgctaaaatgaggcaggagcatcgcaaccgtgtgttccatgatttc
cgaaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgtggtgataaactttgattttccaaagctggcagagacttatctccat
cgtattggcagatcaggtcgttttggacatctcggcctggccatcaacttgatcacctat
gatgatcgattcaacctgaaaagtattgaggagcagttgggaactgaaataaaacccata
ccaagcaacattgacaagagcctttacgtggcagaataccacagtgaacctgtagaagat
gagaaacagtaa
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