Meleagris gallopavo (turkey): 100543405
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Entry
100543405 CDS
T01523
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100543405 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100543405 (NUP54)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100543405 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
100543405
NCBI-ProteinID:
XP_010707966
Ensembl:
ENSMGAG00000009824
UniProt:
G1NBW8
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All DBs
Position
4:16996358..17007460
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AA seq
565 aa
AA seq
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MSAVISEPAFLPELTLPCSLSASCLSGFGGLETTNSTAGGFNFGGFGLAANPAVNFNIGN
FGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTSGLFGASQNKGFG
FGTSFGTGTGTGLGTGLGTGLGFGGFGTQQQQQQTSLGGGLFSQPAQTPAQSNQLINTAS
ALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFSNNIAPVEFTQENPFCRFKAVGYSLMP
NNKDEDGLVVLVFNRKEVDIRSQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVII
YVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSFSMARTELSPAQVKQLLQNPPA
GVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQ
KNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDIIQCELN
APTQFRGRLNELMSQIRMQNHFGAVRAEERYYIDSDLLREIKQHLKQQQEGLSHLISIIK
DDLEDIKLIEHELNESIPMRGGFFS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgttatttctgaacctgcctttctcccagaactaacgctgccttgctctctt
tctgcttcatgcttgtcaggatttggtgggcttgaaaccacaaactccaccgccggtggg
tttaattttgggggtttcggattagctgctaatcctgcagtgaattttaatattgggaat
ttcggtgtttctactacctcaactccaccattcaattttggtaacagtctggcaagtgca
ggtgcatttggaggatttgggacaaccactaccactgcagcaccagcatttagtttttct
gctcccaccaatacaggcaccagcggactctttggtgcttcccagaacaaaggctttgga
tttggtactagttttgggacaggaactggtactggcttgggtactgggttgggaactggg
ttaggctttggaggctttggtacccagcagcagcagcagcagacctcattaggaggcggt
ttgttcagccagcctgctcagacacctgcccagtcaaaccagctcatcaatactgccagt
gctctctcagctcccacactcttgggagatgagagagatgccatcttggcaaaatggaac
cagctgcaggccttctggggaacggggaaggggtacttcagcaataacatcgctccagtg
gagttcacacaggaaaacccgttttgcagatttaaggctgtgggttacagtttaatgccc
aacaacaaagatgaagatggcctggtggttttggtcttcaacagaaaagaagtagatatt
cgaagccagcagcagcagctcgtagaatcactacacaaaattctgggaggaaaccagacc
cttactgtgaacgtggaaggtgttaaaacgatgccagatgaccagacagaagtgatcatt
tatgtcgtggagcgttcacccaatggcacttcaaggagagttccagcaaccaccctctac
gcccactttgaacaagccaacataaaatcatccctgcagcagctgggggtcagcttctcc
atggccagaacagagctctccccagcccaagtcaaacagctccttcaaaacccccctgct
ggtgttgatcctattatttgggagcaagccaaagttgataatcctgatcctgacaagctt
attcctgtgcccatggtgggtttcaaagaactgttgagaagattgaaggtccaagatcag
atgaccaaacagcatcaaactcgcttagatataatatcagaagatatcagtgagttgcag
aaaaaccagactacaactatggcaaaaattgcacagtacaaaaggaaactgatggctctt
tctcacagaacattacaggtgttaataaaacaagagatccaaaggaaaagtggctatgcc
attcaggcagacgaagaacagcttcgtgtacagttagatataattcagtgtgaacttaac
gcgccgacacagttcagaggcagactgaatgagcttatgtcccaaatcaggatgcaaaac
cactttggagcagtgagggctgaagagcgttattacatagattcagatctcttaagggaa
ataaagcaacatctgaagcagcagcaagaaggcctgagtcacctaattagcattataaaa
gatgacttggaggacatcaaactgatagagcatgagttgaatgagagcattcccatgaga
ggaggtttcttcagttga
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