Meleagris gallopavo (turkey): 100544090
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Entry
100544090 CDS
T01523
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100544090 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mgp03041
]
100544090 (PRPF40A)
Spliceosome [BR:
mgp03041
]
Complex A
U1 snRNP components
U1 related factors
100544090 (PRPF40A)
Complex B
100544090 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
100544090
NCBI-ProteinID:
XP_010712273
Ensembl:
ENSMGAG00000012843
LinkDB
All DBs
Position
7:complement(29224071..29244027)
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AA seq
910 aa
AA seq
DB search
MRPGAVDRSSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFHPQTTHPVVCAA
QQTATTNSSGSEEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKC
PWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEALIKAEENSTKTEESASATSAAADAA
NTAASATAAAEAATAGAASTAAASETESTAASAVVENESAAAATAEDQGQQASSAPAAQE
QSAESAANAADDSKQDGSADASKKEGDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSN
ASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLE
NHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWE
ALKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEE
EEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTSMLGQ
PVSSSGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKR
ATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWE
DIRDRFVKEPAFEDITLESERKRIFKDFIHILEHECQHHHSKNKKHSKKSKKHHRKRSRS
RSGSETEDDDSHSKKKRQRSESRSASERSSSAESERSYKKSKKHKKKSKKRRHKSDSPES
DIEREKDKKERERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRR
TLLEQLDEDQ
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcgccgtggaccgcagctctcttatgatgggacacccggggatgccgcat
tacccgcccatggggatgcaccctatgggtcagaggccaccaaacatgcccccagttcca
catggcatgatgcctcagatgatgcccccaatgggaggaccaccaatggggcagatgcct
ggaatgatgcagtcagtcatgcctggaatgatgatgtctcacatgtcccaagctgctatg
cagcctacggttccgccaggggtgaacagcatggatgcacaagtaggtgtgacacctcct
ggaactcagagctctgttttgtttcaccctcagacaacacatcccgtggtttgtgcagct
cagcaaacagccacgaccaacagttcgggcagtgaggagcactctaaacagaaatcgacg
tggacggaacacaaatcacctgatggaagaacctattactacaacactgaaacaaagcag
tccacgtgggagaagccagatgatcttaaaacacctgctgagcaattgctgtctaagtgc
ccctggaaagagtacaaatctgattctggaaagccatactactataactcccaaactaag
gaatcacgctgggcaaaacccaaagaactcgaagatctggaagcactgatcaaagctgaa
gaaaacagcaccaagactgaagaatctgcttcagcaacttctgctgcagccgatgcagcc
aacacagctgcttcagccacggctgctgctgaggcagccacagctggtgctgccagcact
gctgcagcctccgaaacagaaagcactgctgcctctgctgtggtagaaaacgagagtgcc
gctgcagccacagctgaggatcaggggcagcaagcaagttcagcacctgcagcacaggag
cagagtgcagaaagtgctgctaacgcagccgatgactccaagcaggacggttcagcagat
gcttcaaagaaggagggcgatgatgcgcagccagttaaaaaaacctacacctggaataca
aaagaagaagcaaaacaggcatttaaagaactcctaaaagaaaagcgagttccatccaat
gcttcttgggagcaagccatgaagatgatcattaatgatcctagatacagtgctttggca
aagctgagtgaaaaaaagcaagcctttaatgcttacaaagttcaaacagaaaaagaagaa
aaagaagaagcgagatcaaaatacaaagaagctaaagagtccttccaacgttttctggaa
aaccatgagaagatgacatccacaacacgatacaaaaaagctgaacaaatgtttggggag
atggaggtctggaatgcaatatctgagcgtgaccgcctggagatttatgaagatgttttg
ttttttctctctaagaaagaaaaggaacaagccaaacagttacggaagaggaactgggaa
gctctgaagaacatccttgataacatggctaatgtcacttactgcactacttggtcagag
gctcagcagtacttgatggacaaccctacgtttgcagaagatgaggaacttcagaatatg
gataaggaggatgcgctgatctgctttgaggaacacatcagggcactggaaaaagaggag
gaagaagaaaaacagaaaagtttactgagagaaagaaggcggcagcggaaaaacagagaa
tcttttcagatatttttagatgagctgcacgagcacggccagttacattcaatgtcctct
tggatggagctgtacccaaccataagctctgacatcagattcactagcatgcttggtcag
cctgtttcttcatcaggatcaacagcacttgatctcttcaagttctatgttgaagactta
aaagcacgttatcatgatgaaaagaagatcataaaagatatcttaaaggataaaggattt
gtagttgaagtgaacacttctttcgaagactttgttacagtcatcagttcaactaagaga
gccaccactttagatgcaggaaatatcaagctggctttcaatagtctgctggaaaaggca
gaagcccgtgaaagagaaagggaaaaagaagaagctcgcaaaatgaagcggaaagagtct
gccttcaagagtatgctgaaacaggctactcctcccatcgagctggatgctgtctgggaa
gatatcagagacagatttgtgaaggaaccagcatttgaagatatcactctagagtctgaa
aggaaaagaatattcaaagatttcatacatatactcgagcacgagtgtcagcatcaccat
tcaaagaacaagaagcattctaagaaatccaaaaagcaccacaggaagaggtctcgctct
cgctcgggctcagagactgaggatgatgatagccattcaaagaagaaaaggcagcgttca
gaatctagatctgcttctgagcgttcttccagtgcagaatctgagaggagttacaagaaa
tcaaaaaaacacaagaaaaagagcaagaaaagaagacataagtctgattcaccagaatct
gatattgaacgagaaaaagacaaaaaagaaagagagagagaaagtgaaaaggatagagct
agacaaagatctgaatcaaaacataaatctccgactaaaaaacgacctggaaaagattct
ggcaactgggacacctcgggcagcgagctgagcgaaggggagttggaaaagcagaggcgg
actcttttggaacaactggatgaagatcaatga
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