Meleagris gallopavo (turkey): 100544331
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Entry
100544331 CDS
T01523
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X3
KO
K13191
RNA-binding protein 16
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgp03021
]
100544331 (SCAF8)
03041 Spliceosome [BR:
mgp03041
]
100544331 (SCAF8)
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100544331 (SCAF8)
Spliceosome [BR:
mgp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100544331 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100544331
NCBI-ProteinID:
XP_010705527
Ensembl:
ENSMGAG00000012762
LinkDB
All DBs
Position
2:49217316..49279003
Genome browser
AA seq
1166 aa
AA seq
DB search
MSFQPLKTNWPLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLN
PLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVPESVNNSLFHQLAEQLQQQN
LEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEAETNVDDSMDIQQQ
DMDIDEGQDVAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRS
RSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQ
DLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALN
KGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEWETARSSEPPKEN
IQTTQSTAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFPVTMSVPPPGYSA
IPPPPFLRASFNPSQPPPGFMPPPVPPVVPPPVVPPPVVPPVVPTSLVQPPLPIAQETMK
DVPFTGLVLPVVGTVSSNLATPTLSSGSIFNPLPINKQESDEKGSHLADLQISSSENSRA
VQSDVSSSSGLVGGMQPPSVSSSSGLTGEGQPPSVSSSSGLAGGVQPPNVSSSSGLGGGV
QPPTVSSSSGLAGGVQLPTVSSSSSLAGGVQPTSVSSSSGLMAGVQPPNVSSSSGLLAGV
HPPNISSSPGLLPGMQPPSVSSSSGVLAGVQPPSVSNNSGLLLMPPPNVSSSSGLMGVPP
PNISNNSGLLAIQHPAGVQNMPHLNISSQRMPGMPLIDIRPGLMPHSPGPRFPLMQPGIP
PQRSIPPPAILDPSLHPPPRGPFPPGDIFNQTERPFATPGRQNIDSISNPEKRLPLGSDN
IQQEGDRDYRFPPVENRDNLNRPSQVDVRDSVGRPPVDPRESIGRPPVDGREHFARPHVD
MRENFGRPGIDNLGRREHFAFNSDKHWGQRGDYDEREHHAFPIYGGPKGFHEDRERFRHV
NYRFDSRSGPSWNRGFEQDAHRDFDDRRRPWERQRDRDDRDFNFCREINGNRFGRDRMSN
NWIPPPHPRVFEYFDGATSQRKADNLPQVNGENTETESQPPTAQVQDDSELYEKLTSSVE
INKEKSDTEADIESEPVVESTETEGT
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcagccactgaaaacaaattggcctcttcagcagttgatacagacgctgcag
atacagcagcagaaacctcagccttcactacttcaagccctggatgctggtcttgtcgtt
cagttacaggccctaactgcacaacttacagctgcagctgctgctgccaatacacttaac
ccgttggaacagagtgtctcttttaataagaagctgatggacagatttgactttggggaa
gaatctgaacaaaatgaagagcctaaaaaggaaactcccacttcccaactgcctttagta
ccagaatctgtgaacaactcactttttcaccaactagctgaacaattgcagcaacaaaat
ttagaacatctcagacaacaacttctggagcaacagcagcctcaaaaggcaagccctgag
gaaaatcaggaagggaattttggttcagagcactcggcatcaccatcacaagggagcagt
caacagcagtttttagaagcagaaacaaatgtagatgattcaatggatattcaacaacag
gacatggacatagatgaagggcaggatgttgctgaagaagagatttttgaacaagaagaa
aaaaaatctgctgttcgttcaagatcaagaactcgttcaagatctcgttcaaggtcacca
aggaaacgaaggtctagatcacgatctggttctcgtaagcgtaaacacagaaaacgttca
cgatcaagatcaagagaaaggaagagaaagtcatctcggtcctactccagtgaaagaagg
gctagggaaagggaaaaagaacgtcagaaaaaggggttacctccaatacggtcaaaaaca
ctaagtgtttgcagcactactctttgggtaggtcaagtagacaagaaggcaacacagcaa
gatttgaccaacttgtttgaagaatttggacaaatagaatctattaatatgattccccca
agaggttgtgcatatgtctgcatggttcatagacaagatgcatatcgtgctcttcagaag
cttagttctgggtcctacaaaatcggatctaaaattattaagattgcctgggctttaaat
aaaggtgtgaaaacagagtataagcaattctgggatgtggatctgggagtttcatatatt
ccttgggagaaggtaaaattggatgatttggagggctttgctgaaggtggcatgattgac
caggagacagtaaatacagaatgggaaacagcaaggagctcagaacctcctaaagaaaat
attcaaactacacagagtactgcagttgataagagcacagtgattacgacacagacagaa
gcttacacacagccagtcactatgctacagattccagtagctccagctgtgcctgctgtt
agcttagttccacctgcgtttcctgtcacaatgtctgtcccccctcctggttatagtgcc
attcctcctccacccttcttgcgagcaagtttcaatccttcgcagccacctccaggtttt
atgcctcccccagttcctcctgttgtcccaccacctgttgtcccaccacctgttgtccca
ccagttgttccaacatcgttagtacagcctccattaccaattgctcaagagacaatgaag
gatgtaccttttactggcctggttctaccagttgttggcacagttagtagcaatctagct
actccaacattatcttctggaagcatctttaatcctctgccaatcaacaaacaagaatct
gatgaaaagggatctcatcttgcagaccttcagatttcttccagtgaaaacagtagagct
gtgcaaagtgatgtctcgagtagctctggacttgttggaggaatgcaaccacccagtgtc
tcaagcagttctgggttaactggagaaggccagccacccagtgtctcaagcagctctgga
cttgcaggtggagttcagccacccaatgtctcaagcagctctggacttggaggaggagtg
caaccaccaactgtttcaagcagttctggtcttgcaggaggagtgcagctacccactgtc
tccagtagctcttctcttgcaggaggagttcagccaaccagtgtctcgagcagctctgga
cttatggctggagtgcaaccaccaaatgtctcaagtagctcagggcttctagctggagtg
catccacccaatatctcaagcagccctggccttctaccaggaatgcagcctcccagtgtt
tcaagtagctcaggagttctggcaggagtacagccaccgagtgtctcaaacaactctggt
cttctcctaatgccaccaccgaatgtttcaagtagttctggacttatgggagtgccacca
ccaaatatttcaaataactccggacttctggcaatacagcacccagctggcgttcaaaat
atgcctcatttaaatattagtagtcaaaggatgccaggaatgcctctcatagatatccgt
ccaggcctaatgccccattcacctggaccaaggtttccattaatgcagccaggaatacca
ccacagcgtagtattcctcctccagcaatccttgatccatctcttcaccctccgcctcga
ggtccttttcctccaggagatatttttaatcaaacagaaagaccttttgcaacaccagga
agacaaaatattgatagcatttctaatccagagaaaaggttaccacttggaagcgataat
attcagcaggagggagacagagattatcgctttcctccagtggaaaaccgagataatctc
aacagaccatcccaagtggatgtcagagattctgttggacgaccaccagttgatccaaga
gagagcataggaagacctccagtagatggaagagaacattttgcaagacctcatgtagac
atgagggaaaattttggaagaccaggtatagataatcttggtcgaagagagcattttgct
ttcaattcggataagcactggggacaaagaggagattatgatgaaagagagcaccatgcc
tttcctatttatggtggccctaaaggcttccatgaggacagagagagatttcggcatgta
aactataggtttgatagtagaagtggtcccagctggaatagaggatttgaacaagatgct
cacagagattttgatgaccgcagaagaccctgggaaagacagagggacagggatgacaga
gattttaacttctgcagagaaattaatgggaacaggtttggaagagacagaatgtcaaac
aactggatccctcctccacacccacgggtttttgaatactttgatggggccacttcccag
cgcaaagcggataatttgccccaggtaaatggtgaaaatacagagacagaaagtcaacca
ccaactgcacaggtgcaggacgattcagaactttatgaaaaactgacatcttccgtcgag
ataaacaaagagaagagtgacacagaagctgatatagaaagtgaaccagtggtagaaagc
acagaaactgaggggacataa
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