Meleagris gallopavo (turkey): 100544480
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Entry
100544480 CDS
T01523
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X2
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100544480 (DDX3X)
03041 Spliceosome [BR:
mgp03041
]
100544480 (DDX3X)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100544480 (DDX3X)
Enzymes [BR:
mgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100544480 (DDX3X)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100544480 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
100544480 (DDX3X)
Spliceosome [BR:
mgp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100544480 (DDX3X)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100544480 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100544480
NCBI-ProteinID:
XP_010723017
Ensembl:
ENSMGAG00000014609
UniProt:
G1NP43
LinkDB
All DBs
Position
1:complement(109461373..109478332)
Genome browser
AA seq
651 aa
AA seq
DB search
MSHVAVENALSLDQQFSGLDLNSSDSQSEGTATSKGRYIPPHLRNREASKQGFDSGGWSS
SRDKDAYSSFGARSDRGAKSSFFDRGNGSRGGRYEERGRGSDYDRSGFGRFDRGGNSRWC
DKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMG
EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPG
DALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQ
QIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD
TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKR
SFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFR
SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER
NINITKDLLDLLVEAKQEVPSWLENMAYEQHHKGGGSRGRSKSRFSGGFGARDYRTSSGA
GSSSFNSSRSTSSRSGGSGSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgccctcagtctagaccagcagttttctggtctagac
ttgaattcctcagactcccagagcgaaggaaccgctacaagcaaaggcagatacattcct
cctcacttaaggaacagggaagcttccaaacagggtttcgatagcggtggctggagttct
agcagagacaaggatgcatacagcagctttggtgcacggtccgaccgtggagcaaaatca
agcttctttgaccgtggaaatggatcaagaggaggaaggtatgaagagcgtggaagaggt
agcgactatgataggagtggcttcggtagatttgaccgtggtggaaatagccgttggtgt
gacaaatctgatgaagatgactggtcgaagcctcttcccccaagtgaacgcctggaacaa
gagctcttttcaggaagcaatactggcattaactttgagaaatacgatgatattcctgtt
gaagcaacaggcagcaattgtcctccacatattgaaagtttcagtgatgttgatatggga
gaaattattatgggaaacattgagctcacacgttacactcgtcctactccagtccagaaa
catgcaatacctattattaaagagaagagagacttgatggcctgtgctcagacagggtct
gggaaaactgctgcgtttcttctaccaatattgagccagatctatgcagatggacctggt
gatgccttgagagctatgaaggagaatggaaggtatggacgccgtaagcaatatccaatc
tcactggtcttggctccaactagagaactggctgtgcagatctatgaggaggccaggaag
tttgcataccgttccagagttcgtccctgcgttgtgtatggaggtgcagacattgggcaa
caaatacgtgacttagaacgtggatgtcacttgcttgtagcaactccaggtcgactggtt
gatatgatggagaggggaaagattggactggatttttgcaaatacctagtgcttgatgaa
gctgatagaatgctcgacatgggtttcgaacctcagattagacgaattgttgaacaagat
acaatgccgccaaagggggttcgtcataccatgatgttcagtgctactttccccaaggaa
atccagatgcttgctcgtgacttccttgatgagtatatcttcctagctgttggcagagta
ggttctacatctgagaatatcacacagaaagtagtctgggtggaagagttggacaaacga
tcatttctgctcgacctactaaatgccacaggcaaggattctttgactctggtgtttgtg
gaaactaaaaagggagcagatgctcttgaagacttcctctaccatgaaggatatgcctgt
acaagtatacatggagatcgttctcagagagaccgagaggaagcactccatcagttccgt
tcgggcaagagcccaattcttgtagccacagctgtagcagcaagaggactggatatatca
aatgtaaagcacgtcataaactttgatttgccaagtgacattgaagaatatgtgcaccgt
attggtcgtacaggccgtgtaggaaaccttggtctcgccacctcgttcttcaatgaaaga
aatataaacatcaccaaggatttacttgatcttcttgttgaggctaagcaagaagttcca
tcttggctggaaaacatggcttacgaacagcatcacaaaggaggtggcagccgtgggcga
tctaagagtagatttagtggaggatttggtgccagagactaccgaacaagtagcggtgct
ggcagcagcagctttaacagcagtcgatcaaccagcagccgtagtggaggaagtggcagc
agaggatttggaggtggtggttacggaggcttctacaacagtgatggatatggaggaaac
tataactcccagggtgttgactggtggggcaactga
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integrated database retrieval system
