Meleagris gallopavo (turkey): 100544570
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Entry
100544570 CDS
T01523
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mgp03000
]
100544570 (SOX30)
Transcription factors [BR:
mgp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100544570 (SOX30)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100544570
NCBI-ProteinID:
XP_003210426
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Position
15:10545331..10552289
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AA seq
639 aa
AA seq
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MERGGGGGHGPDSDLDLCSQGPSGGEEAQAPLQEARVKAKELQQQDGGFPARPEGSKEAG
GELRCSPAPWGGKEKAKEDREKCGGEEQEDVVVVEIRGGVKEPRPGARADGDEDGAAGRA
SRGPAHVNGDGGVAQPGEGLGVLPEDLKIPLVLRPLPPGARIQVQGPLLPKLIQVSKGPV
SQVPLKMQTLLEPSVKIETKNVPLTVLPSDSGMPDTPFSKDKTGHVKRPMNAFMVWARIH
RPALAKANPNANNAEISVQLGLEWSKLTEEQKQPYYDEARKIKQRHREEFPGWVYQPRPG
KRKRYPLAVSAVFSSTTQNIITTNPVAVYPFPSPAFPAAMHNIQKNTGHPICEAPSATRL
PASSIQRPSPINLFRPAIASTTPVAVPAPTLPLRPIIASQHFAEPTQREARDVSSGSYCF
LKRSTPIVVDLSSRSSSTTTNTNDRFSVPNSEFPKEYSGISAYPRGVLLPQVTPLPHSHL
CESPPIGQAASLYGVPPQFSFYHPYFVPGPHYFPSSTCPFSRPPFGCGNFSSSVPECLGF
YGDGYQKQEMKFSPLDRDYSFRGHPGGSIREDSRVCTHLEEVTSHSSHSEEGCISPISQL
DTGALENDLPSTPPSPSSIQLVNVTDSEDEEEKKVLQEL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggcgggggcggcggccacggcccggattctgacctcgatctctgctctcag
ggtccctcaggcggtgaggaggcccaagcgcccctccaggaggcgcgcgttaaagccaag
gagctgcagcagcaggacggaggcttccccgcccgtcctgagggcagcaaggaagcggga
ggggagctcaggtgctccccagctccatgggggggaaaagagaaggcaaaagaggatcga
gaaaagtgcggcggagaagagcaggaagacgtggtggtggtggagatcagaggaggtgtg
aaggagccccgtccaggagcgagggcagatggggatgaggacggtgctgcaggcagggcc
tcgcgtgggcccgcacacgtcaatggtgatggcggcgtggcacagcccggagaggggctg
ggggtcctccctgaagacctgaagatccccctggtgcttcgccctttgccgcctggtgcc
cgtatacaggtccaaggccccctgctgccaaagctgatccaggtgtcaaaggggcccgtg
agccaagtgcctcttaaaatgcagaccctgctggagccttccgtaaaaattgaaactaaa
aacgttcccctcacagtactgccctccgattcaggtatgccagatactccattcagcaag
gacaaaactggccacgtaaagcgtccaatgaatgcatttatggtgtgggctaggattcac
cgacctgccctagctaaagccaaccccaatgccaataatgctgaaatcagtgttcagctg
ggtttggagtggagcaaactgactgaagagcagaaacagccctattacgatgaagctcgg
aaaataaaacaaaggcacagagaggaatttcctggttgggtttatcaaccacgaccaggc
aagaggaagcgttatccactggctgtctctgctgtattttccagcactacccagaatatc
atcactacaaatccagttgctgtttatccctttccatcgcctgcattccctgctgccatg
cacaatattcagaaaaatactggacatccaatctgtgaagctccttctgccacccggctg
ccagcttcttctattcaacgtccaagtccaattaatcttttccgacctgctattgcaagc
accactccagtagcagttccagctccaaccctgcctctgcgccctataattgcatcacag
cactttgctgagcctactcagagagaagctcgtgatgtatcatctggatcctattgcttt
ctgaagagatcaacaccaatcgttgttgatctctccagtagaagttcaagtaccacaaca
aacactaatgacagattttctgtccctaatagcgagttcccaaaggagtactcagggatt
tctgcttatcccagaggtgtacttcttccccaagttacacctcttcctcattcgcatctc
tgtgagagtcctcccattggccaggcagccagtctgtatggagtacctcctcagttttca
ttttatcacccctacttcgttcctggacctcactatttcccctcaagcacgtgcccattc
agccgtcccccttttggctgtgggaatttctccagctcagtgcctgaatgcctcggcttc
tatggagacggctaccaaaagcaggagatgaagttttcacctctggatagagattactct
ttcaggggacacccagggggaagcatacgtgaagattcacgtgtctgcacacacctcgaa
gaagtgacctctcacagcagccacagtgaagagggctgtataagccccatatcacagcta
gacactggagcacttgagaatgatttgccatccaccccaccttctccttccagcatccag
ctagtcaatgtgactgacagtgaggacgaagaagaaaaaaaggtgttgcaagagctgtaa
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