Meleagris gallopavo (turkey): 100545639
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Entry
100545639 CDS
T01523
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04622
RIG-I-like receptor signaling pathway
mgp05164
Influenza A
mgp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100545639 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100545639 (IFIH1)
05168 Herpes simplex virus 1 infection
100545639 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mgp04054
]
100545639 (IFIH1)
Enzymes [BR:
mgp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100545639 (IFIH1)
Pattern recognition receptors [BR:
mgp04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100545639 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
SNF2-rel_dom
DUF7219
DUF3638
Fin
Yippee-Mis18
DUF6487
AAA_11
Motif
Other DBs
NCBI-GeneID:
100545639
NCBI-ProteinID:
XP_010712116
Ensembl:
ENSMGAG00000010882
LinkDB
All DBs
Position
7:19172169..19191553
Genome browser
AA seq
787 aa
AA seq
DB search
MEKVDLLAVSEEPESAQVHGTQRDPSTGFERTQIYHTIFISVFHLESLVAVGDASNLNEN
LGRSSPTSDSGEDEAEGRASPEPDLILRDYQMEVAKPALNGENIIICLPTGSGKTRVAVY
ITKDHLDKKKKASEPGKVIVLVNKVPLVEQHLRKEFNPFLKRWYQVIGLSGDSELKISFP
EVVKRNDVIICTAQILENSLLNATEEDEGVHLSDFSLMIIDECHHTQKEGVYNNIMRRYL
KDKIKNRKQAKENKPLIPQPQILGLTASPGVGGAKSRPKAEEHILKICANLDACRIMTVT
EHASQLKNQVKDPFKKTVIADDKRRDPFRERIIEIMQDIQKYCQLYPKSEFGSQPYEQWV
IREERRAAKEEKRKERVCAEHLKKYNDALQINDTIRMVDAYNHLNNFYKELKRKKTAGSD
DDEEPLVSKKDETDEFLMGLFHEKKKQLKELARKPEYDNEKLMKLRNTLMEEFTKTEESR
GIIFTKTRQSALALYHWIMDNPKFEEVGIKAHYLIGAGHNSETKPMTQNEQREVIDKFRG
GSINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYALVASSGSGA
VEREDVNIFRENMMYKAIQRVQEMPPEEYLNKIQDFQLQSIVEKRMKAKRDQRKTYKKNP
SLITFLCKNCHKVICSGEDIRVIENMHHVSVKKDFQHLYHIRENRTLQDKHADYQTNVEI
ICKDCGQPWGNMMVYRGLDLPCLKIRNFVVVFEDKKTTKEIFKKWGELPITFPNLDYAAH
CPSSDED
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagtagatctgcttgctgtaagtgaagaacctgaaagtgcccaagtccatggg
acccaacgagatccatccacaggttttgagagaactcaaatataccacaccatatttatt
tctgtttttcacttagaatcacttgttgctgtaggagatgcaagtaacttgaatgaaaac
ctgggacggagcagcccgaccagtgattcaggtgaagatgaagcagagggcagagcttca
cctgagccagatctcatcctcagagattaccagatggaagttgcaaaaccagcactgaat
ggggagaatataataatatgtctccctaccggcagtggtaaaaccagagtggctgtttac
attaccaaagatcacttggataagaagaaaaaagcatcagagccaggaaaagttatagta
cttgttaataaggtaccgttagtggaacagcatttacgaaaggagtttaatccattcctg
aaacgctggtatcaagttattggtttaagtggtgattctgagctgaaaatctcatttcct
gaagttgtcaaaagaaatgatgtcatcatttgtacagcacagatcctggagaattcattg
ctaaatgccactgaagaagatgaaggtgtccacttgtcagatttttcactcatgattatt
gatgagtgccatcacactcaaaaggaaggtgtttacaacaatatcatgcgacgttactta
aaagataagatcaagaacagaaagcaggcaaaagaaaacaaacctttgattccacagcct
cagattctgggactcacagcctcacctggagtcggcggtgcaaaatccagaccgaaagct
gaagaacatattctgaaaatctgtgccaatcttgatgcatgcagaatcatgactgttaca
gagcatgcctcccaactgaagaatcaggtgaaggatccatttaagaagactgtgattgca
gatgacaaaagaagggatccatttagagaaagaattattgagatcatgcaagatattcaa
aaatattgccaactctatccaaaatctgagtttggatctcagccttatgaacaatgggtg
attagggaagagagaagagctgcaaaagaagaaaaacgcaaggaacgtgtctgtgcagaa
cacttgaagaaatataatgatgcactgcaaatcaatgataccattcgaatggttgatgca
tacaatcacctaaataacttttataaggagctaaaaaggaagaagacagcagggagtgat
gatgatgaagaaccattagtatcaaaaaaggatgaaacagatgaatttttaatgggttta
tttcatgaaaaaaagaaacaactgaaagagttggctagaaagccagaatatgacaatgag
aagctaatgaagctccgaaacactttaatggaagagtttacaaagactgaagaatcaaga
gggattattttcacgaagactcgacaaagtgccttagctctataccactggattatggat
aacccaaaatttgaagaagtgggaatcaaagctcattatcttattggtgctggacacaat
agtgaaactaaacctatgactcagaatgagcaaagggaagtcattgataaattccgaggt
ggaagtataaacttacttattgctactactgtagctgaggaaggcctagacatcaaagag
tgtaacattgttattcgctatggtctggtcaccaatgaaattgctatggtgcaggcccgt
ggtcgagctcgagctgatgagagcacttatgcacttgtggcttcaagtggctcaggagcg
gttgaacgtgaagatgtaaatattttccgtgaaaatatgatgtataaggccattcaacgt
gtccaagagatgccaccagaagaatatttaaacaagattcaggactttcagttgcaaagt
atagtggaaaaacgaatgaaggcaaagagagatcagcgtaagacatataagaaaaaccct
tcactaataacattcctatgcaagaattgccacaaggtgatatgttctggagaagatata
cgagttattgaaaatatgcatcatgtcagtgtgaaaaaagatttccaacatctttaccat
ataagagaaaacaggacattgcaagacaagcatgctgattaccagacaaatgtggaaatt
atatgtaaagattgtggacaaccttggggaaatatgatggtttatcgaggtcttgacctg
ccttgtctaaagattagaaattttgtggttgtttttgaagacaagaaaacaacaaaggag
attttcaagaaatggggagaactgcccatcacgtttcctaatcttgattatgcagctcat
tgtccttcaagcgatgaagattaa
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