Meleagris gallopavo (turkey): 100545696
Help
Entry
100545696 CDS
T01523
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03082
ATP-dependent chromatin remodeling
mgp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100545696 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100545696 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mgp01009
]
100545696 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgp03021
]
100545696 (SMARCB1)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100545696 (SMARCB1)
Protein phosphatases and associated proteins [BR:
mgp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100545696 (SMARCB1)
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100545696 (SMARCB1)
SWI/SNF complex
100545696 (SMARCB1)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100545696 (SMARCB1)
PBAF complex
100545696 (SMARCB1)
SWI/SNF complex
100545696 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
100545696
NCBI-ProteinID:
XP_010718631
Ensembl:
ENSMGAG00000007343
LinkDB
All DBs
Position
17:8126970..8137881
Genome browser
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaacctttgggcagaagcctgttaagttccagctggag
gaggacggcgagttctatatgatcggctccgaggtggggaactacctgcgtatgttccgg
ggctcgctgtacaagaggtacccctcactctggagacgactggccacagtggaagaaagg
aagaagatagtggcatcttcacatgaaaatcagcggtctcacagtcccagaagatatcat
ggatatacaacattagccaccagtgtgacactgttgaaggcctctgaagtggaagagatc
ttggatggaaatgatgagaaatacaaggcagtgtctatcagcacagaacctcccacctac
ctcagagaacagaaggcaaagaggaacaaccagtgggtgccaacgctgcccaacagctct
catcacctggatgcagtgccgtgctcaacaacaattaacagaaatcgcatgggcagggac
aagaagaggacattccctctgtgctttgatgaccatgacccagcagtcatccatgagaac
gcatcccagccagaggttctggttccaatcaggcttgacatggaaattgatgggcagaaa
ctcagagatgcatttacatggaacatgaatgaaaagctgatgaccccagaaatgttctca
gagattctttgtgatgacctggatttgaatcctctgacctttgtccctgctattgcctct
gccatccgacagcagatcgaatcgtacccaactgacagcatcctagaggatcagtcagac
caacgcgttattattaagctaaacatccacgtagggaacatctcccttgtagaccagttt
gaatgggacatgtcagagaaggagaattcaccagagaagtttgccttgaagctgtgctca
gagcttggtctgggtggggagtttgtcactactattgcctacagcatccgggggcagctg
agctggcatcagaagacatatgccttcagtgaaaaccctttgccgactgtggaaatcgcg
attcgcaacacaggggatgctgaccagtggtgccctcttctggaaaccctcacagatgcc
gagatggagaagaagatcagagaccaggatagaaatacaaggcgcatgagacgcttggcc
aacactgctccagcctggtaa
DBGET
integrated database retrieval system
