Meleagris gallopavo (turkey): 100547366
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Entry
100547366 CDS
T01523
Symbol
LRBA
Name
(RefSeq) LOW QUALITY PROTEIN: lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mgp04131
]
100547366 (LRBA)
Membrane trafficking [BR:
mgp04131
]
Endosome - Lysosome transport
Others
Others
100547366 (LRBA)
Endosome - Golgi transport
100547366 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100547366 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
100547366
NCBI-ProteinID:
XP_010707849
LinkDB
All DBs
Position
4:complement(12437648..12806211)
Genome browser
AA seq
2850 aa
AA seq
DB search
MASDGKQVVQPTGDGGGGAGKEGNVAEGGSVLQPLNPGVPIRGIRMKFAVLAGLVEVGEV
SIRDIVDTIFNLLVGGQFDLEMNFIIQEGEGITCMVELLDKCDISCQAEVWSMFTAILKK
SIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDDHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSVQSALHSIGGVQVLFPLF
AQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQDQMLSCKGFLVIGYSLEKSSKVHV
TRAVLELCLAFSKYLSNLHNGAPLLKQLCDHILLNPAIWIHIPAQVQLILYTYLSTEFIG
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGVDGPRPTQKETLSLRAFLLM
FIKQLVMKDYGIKEEELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNG
LQVIYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEIMLGHGLFSLLAERLMLHTNLIT
MTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILLRNSPQSPETLEIRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTVFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQEKGSEESVICPSAPIRTISG
VGKGAEVVEKKQCLELKEAATAPPFLDDMESSTEKNKSDGDQQTPSVSKQRKDLKDEDRK
TMQDLKAVPCSELSPEPEAIKPSVSEISSGIAEAIEDSLSRAHEFVEETAAVTAASLVME
TSLEGETHESSGMERSAVEVEDEDDFVDLKEESSMPLPSGEFAETDRKHNSNENEEAKQE
KAVQQGLESALLKSEDTGGVDGQNKELALSETVSSATEVVNQPNSEGXKKLEEEKVLYSE
TRTADDTNAHVPEHAGCSEKRIARLDVSSVASDTERLELKASTHLEAPLPPRSLPEMSRQ
QDSSGQELAATSDGQRRDSRSTVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKT
VMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENIEATQGLSV
EASLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAIAVRNCLECQQ
HAQVKSIGDVAKNQKTVQGFLGAGKSAAKSPVDIVTGGISPIRDLDRLLQDMDINRLRAV
VFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPLNHSQSFKESEKENNGTS
AADVEHPSAAIGALTSASAGDSECTASVQRRDSGLGEEPASEQTNSSGGVAEAGALSVSA
GPDAVSEVLCTLSLEVNKSQEDRGETGPEDMKPSASVPAAKNVNVKDILRSLVSTPADGT
AVDPALLPPAFLGVLGDGAAEQPVQFHSFDRSVVVPPKKSNISSTTAAVGIPANAVSVVS
SLDSAQAPDLSGESPGRRSSNSKLPSVPTVSSVPEDSASNMSITDRLEHALEKAAPLLRE
IFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLA
FIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDINRHAEFESLCAQYSADKREEEK
MCHHLITAAKYRDQVTATQLIQKIVNILTDKHGAWGSSAPSRPREFWRLDYWEDDLRRRR
RFVRNPLGSTHPEATLKAAGEHAPDEDILVKGKQSIKSQALGNQNSESEILLEGDDDITS
FIEEREVENLTGPVALSAPAQLVAPSVVVKGTLSITLSELYFEVDEEDPSFKKIDPKILA
YTEGLHGKWLFSEIRAIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVVNCLPRVG
IGATFGLPQTRRISLASPRQIFKASHMTQRWQHRDISNFEYLMFLNTIAGRTYNDLNQYP
IFPWVLTNYESDELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTH
YSTASFALAWLLRIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEF
YYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQWI
DLIFGYKQQGPEAARSLNVFYYLTYEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIE
PHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLTNPAVITV
TANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVHSQ
CFVITSDNRYILVCGFWDKSFRVYSTDSGKMMQVIFGHWDVVTCLARSESYIGGNCYILS
GSRDATLLLWYWNGKTNIVGDNPRGDFATPRAILTGHDYEITCATICAELGLVISGSKEG
PCLIHSMNGDLLRTLEGPETLEGPENCLRPKLIQASREGQCVIYYENGLFCVFSVNGRLQ
ATMETDDKIKAIQLSRDGQYLLTGGDNGVVMIWQMWDLKKLFAYPGCDAGIRSMALSYDQ
RCILTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8553 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacggcaaacaagttgtgcagccaacaggtgatggcggaggaggagcgggg
aaagagggaaacgtcgccgaaggcggaagcgtactgcagcctctgaatccaggggttccc
atccgaggcatcaggatgaagtttgccgtgctggcagggctggtggaggttggtgaggtg
tcgatcagagacatcgtggatacgatttttaatctgcttgttggaggccaatttgacttg
gaaatgaactttatcatccaagaaggagagggcattacctgcatggtagaattgctggat
aaatgtgacatctcctgtcaggctgaggtgtggagcatgtttacagctatcttgaaaaaa
agtatacgcaatctacaagcgtgcacagaagtgggactggttgaacaagtgctcaagagg
attgatagagctgacaacatgattgcagatctcttagtggatatgctgggtgtgttggct
agctacaacttgacggttcgagagctaaagttattcttcagcaagcttcaaggagaaaaa
gggagatggccaccacatgctgggaaattgttgtctgtgttaaaacacatgcctcagaag
tatggacctgatgccttcttcaactttccagggaaaagtgctgcagccattgccttacct
cctatagccaagtggccctatcagaatggatttacttttcacacttggttaagaatggat
cctgtaaacaatatcaatgtggataaggataagccatatttatattgttttcgaacgaac
aaaggacttggctattctgctcactttgttggtggctgcttgattgtaacgtccataaaa
tcaaagggaaaaggttttcagcactgtgtaaaatttgatttcaaaccacaaaagtggtat
atggttactattgtgcacatctataatcgctggaagaatagtgaacttcgatgctatgtg
aatggagaactggcatcttatggagaaataacatggtttgtcaacaccagtgacacattt
gacaaatgtttcctgggttcctcagaaacagcagatgccaatcgagtgttttgtgggcaa
atgacgtctgtttacctttttagtgaggctctcaatgctgctcaaatctttgccatttat
cagcttggtctgggatataagggaacattcaaattcaaggcagaaagtgatctattcctt
gatgatcatcataaattgttgctgtatgatggcaagctatccagtgctattgcttttatg
tacaatccaagggctacagatgcacagctctgtctagagtcatcccctaaagataaccct
tctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttgaca
cattctgtccaaagtgccttgcattccattggaggagtgcaggtactttttcctctcttt
gcacagctagactataggcaatattcatcagaccacattgacacaactgtttgttcaact
ttgttggcttttattatggagttgttgaagaactcgattgctatgcaagatcaaatgctt
tcctgtaagggcttccttgtgataggatatagcttggaaaagtcttccaaagttcatgtt
acccgagctgtactagagctatgccttgctttttctaagtacctgagcaacttgcacaat
ggggcgcccttgctgaaacagctatgtgatcatattctccttaatcctgcaatatggatt
catatcccagcacaggttcagctgatcctgtacacttacttgtctactgagttcattggc
actgttaacatatatggtgcaattagacgggttgggacagttcttttggtcatgcatacc
ctgaagtattattactgggtagtgaatcctcaagatcgcagtggtataactcccaaaggc
gtagatgggccacggcctactcaaaaagagactttatctctgcgagcatttttgttgatg
ttcattaaacaactagtgatgaaggactatggaataaaagaagaagaattgcaggcaatc
ctcaattatctactcactattcatgaggatgacaatctaatggatgtcctgcagttgctt
gttgctctcatgtcagagcacccaagttctatgatccctgcttttgatcagaggaatgga
ttacaggtcatctataaacttttagcatcaaaaagtgaaggcatcagggtgcaagctctg
aaagtgatggggtatttcttaaagcatcttgctccaaagagaaaagctgaaatcatgctt
ggacatggattgttttctttgctggctgaaaggctgatgcttcatacaaacttgatcacc
atgaccacatacaatgtcttatttgagattctgactgaacagatttgtactcaagtgata
cataaacaacatcctgacccagattcaacagtgaagatacaaaatcctcagattttgaag
gttattgccatcctgctacggaattctccccagagtccagaaacgttggagattcggcga
gcctttctctcagatatgattaaactttttaataacagcagagaaaataggaggagtttg
ttgcagtgctccgtttggcaggagtggatgctttctctttgctgttttaatcccaagact
tcagaggagcagaagataactgagatggtgtataccgtttttcgaattttgctttaccat
gctatcaagtatgagtggggtggctggcgtgtttgggtggatacactgtctatcacacat
tcaaaggtaacctttgaaatgcacaaagaaagtctttctcaaatgtacagggaataccaa
gagaagggaagtgaagagagtgtaatctgtccttcagctccaattagaacaatttctgga
gttggcaaaggagctgaagttgtggaaaagaagcagtgtttggaattaaaagaagctgct
actgctcctcccttccttgatgatatggagtccagtactgaaaaaaacaagtcagatggt
gaccagcaaactccttcagtctctaagcaaaggaaggacttgaaggatgaggacaggaaa
actatgcaggatctaaaagcagtgccttgttcagaactttctccagagcctgaagcaata
aaacccagtgtttctgaaattagtagtggaatagctgaagcaattgaagattctctgagc
agagctcatgagtttgtggaggaaacggctgctgttactgcagcttctttggtaatggaa
acttctttggaaggagaaactcatgaaagttcaggtatggaaagatcagcagtggaagtg
gaagacgaagatgacttcgttgatttgaaagaggagagtagtatgcctttgccttcagga
gagtttgcagaaacagacagaaagcacaactctaatgaaaatgaagaggcaaagcaggaa
aaggcagtacaacagggacttgaatctgcgcttttaaaatctgaagatactggaggcgtg
gatgggcaaaacaaagaactggctttatcagaaacagtcagttctgcaacggaagtagtg
aatcagccgaattcagaagggnaaaagaaactggaggaagaaaaggtgctttatagtgaa
accagaacagctgacgataccaatgcacatgtaccagagcatgcaggatgctctgaaaaa
agaattgccaggcttgatgtttctagtgttgcatctgatacagaaagactggaactgaaa
gccagtacacatcttgaagcacctctgccccccagatccctacctgagatgtcaaggcag
caagattcttcaggacaagagctagctgctacatcggatgggcagagaagagactctaga
tcaactgtgttccgtattcctgagtttaagtggtcactgatgcatcagcgcttgcttaca
gacttgctcttttccattgaaacagatatacagatgtggagaagtcattctacaaaaact
gtaatggacttcgtgaatagcagtgacaatgtcatatttgtacacaataccattcacctc
atctctcaagtaatggacaacatgatcatggcttgtggtggcatattgcctctgctttct
gctgccacgtctgctactcatgaattggagaacattgaggcaactcaaggactctcggta
gaagcttctttaacatttctccagagattaattaaccttgtagacgtgttaatttttgca
agctctcttggtttcactgaaattgagtctgaaaaaaatatgtcatctggaggaattcta
cgacaatgtcttcgtctggtatgtgccatagcagtaagaaattgcttggagtgtcagcaa
catgcacaggtgaagtcaattggagatgttgcaaagaaccaaaaaacagtgcaggggttt
ctaggagcaggaaagtctgcagcaaagagtccagtggacatcgtgactggtggaatttct
ccaatacgagaccttgacagacttctgcaggacatggatattaatagacttcgagcagta
gtgttcagagatatagaggatagtaaacaggctcagttcttggctttggcagttgtatat
tttatttctgtactcatggtttcaaaatacagagatattctggaaccccagaatgaaaga
agaccactaaaccacagtcagtcattcaaggaatcagagaaagaaaataatggaacttct
gctgcagatgtggaacatccatctgctgctattggtgctttaacttcagcttctgctgga
gattcagagtgtacagcatctgtacaaagaagggactctggtcttggggaggaaccagct
tcagagcaaacaaacagttcgggcggtgttgctgaggcaggagctctgagtgtcagtgca
ggtccagatgctgtcagtgaagtactttgcactctgtccttagaagtaaataagtctcag
gaggacagaggtgaaactggaccagaggacatgaaaccttcagcttctgtgccagctgca
aaaaatgttaatgtgaaggacattctgagaagcttagtaagcacaccagctgatgggact
gcagttgatcctgctcttctgccacctgcctttcttggagttcttggtgatggagctgct
gaacagcctgtacagttccattcatttgacaggagtgttgtagtaccacccaagaaatca
aacatttcctctactacagctgctgtgggtattcctgcaaatgctgtcagtgtggtttct
tctttagattcggcacaagccccagatttgtcaggagaatctcctggaaggcgttcatct
aattcaaaactgccatctgtccctacagtttcttcagtgcctgaggattctgcttcaaat
atgagtattacagacagacttgaacatgctttggaaaaagctgccccacttctgagagag
atttttgtggattttgctccctttctttctcgaactcttttgggcagccatggtcaggag
ttgctgatagaaggtacaagccttgtgtgtatgaaatctagcagttcagttgtggagctg
gtgatgcttctttgctcacaggagtggcagaactctatacaaaagaatgctggccttgcc
tttattgagcttgtcaatgaaggaagattgttgagtcagactatgaaggaccatttggtc
agagtggctaatgaagcagaatttatcttgagcagacagagggcagaagatattaaccga
catgctgaatttgagtcactgtgtgcccagtactccgctgacaaacgggaagaagaaaaa
atgtgccatcatttgataacagcagctaagtaccgagaccaagtgactgcaactcagcta
atacagaaaattgtcaacattcttacagacaagcatggagcctggggaagctctgcgcca
agtcgtcctcgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcga
cgatttgtgcgtaaccccctcggatcgacacatcctgaagcgacactaaaagcagccgga
gaacacgctcccgacgaagatatacttgttaagggaaagcagtctatcaagagtcaagcc
ttaggaaatcagaactcagaaagtgagattctcttggaaggcgacgacgatatcacgtca
ttcattgaggagagagaagtggagaacctaacaggtccagttgccctgagcgcgccagct
cagctggtggcaccctcggtggtggtgaaaggcactctgtccatcactctttccgagctc
tacttcgaggtggatgaagaagatcccagttttaagaaaatcgacccgaagattctggca
tatacagaaggactccatggcaaatggcttttttcagagattcgagctatcttttcccga
cgctaccttctacaaaatacagcactggagatattcatggcaaatagagtgggtgtcatg
ttcaactttcctgaccaagcgacagtaaagaaagtggtcaactgtctacctcgggttggt
attggggctacctttggattacctcagaccagacgcatttctttggctagtccacgacag
attttcaaagcttcccatatgacccagcggtggcaacatcgagatatttccaactttgaa
tacctgatgtttctaaacacaatagcaggtcgcacttacaatgatttaaatcagtaccct
attttcccttgggttcttaccaactatgaatcagatgagttggaccttacgcttcctagc
aacttcagagatttgtcaaagcctattggtgctttgaacccaaagagggcagcgttcttt
gctgagagatatgaatcatgggaagatgatcaagttccaaagtttcattatggtacacat
tattcaactgcaagttttgcactcgcatggttattaagaatcgaaccctttacaaccctt
ttcctaaatctacaaggtgggaagtttgatcatgcagatagaaccttttcatctatttca
agagcgtggcgcaacagtcagcgtgacacttctgatatcaaggaattgattcccgaattc
tattacctcccagagatatttgtcaacagcaacaattacaatctaggagtgatggatgat
ggaacagttgtgtctgacgttgaacttccaccgtgggccaaaaccccagaagaatttgtt
cgcataaacagactggcgttagaaagtgagtttgtttcctgccagcttcaccagtggatt
gatctgatttttggctacaagcagcaagggccagaggctgccagatccctgaatgtgttc
tactatttgacgtatgaaggagctgttaatttaaattcaataacagatcctgtgttgaga
gaggctgttgaagctcaaatacgaagttttggacagaccccttcccaactgctcatagaa
ccacatcctccaagaagttctgccatgcaggtgtatctcctcctgcagagcccgttgatg
ttcacagaccaagctcaacaggatgtaatcatggttctaaagttcccatccaattcccct
gtcactcatgtagcagccaacacccagcctggtctgaccaatcctgctgtgatcacagtt
actgccaataggctatttgctgtaaataagtggcataatcttcctgctcatcaaggtgct
gtacaagaccagccttaccagctgccagtggaaatcgatcctctcatagccagcaataca
ggtatgcacagaaggcagatcactgaccttttagaccaaagcattcaggtacattcccag
tgttttgtcatcacctctgacaatcgttatatcttggtttgtggcttctgggacaagagt
ttccgagtttattctaccgattcaggtaaaatgatgcaagtaatatttggacactgggat
gttgttacctgtcttgctcgttctgaatcatatattggaggaaattgctacattctgtca
gggtctcgtgatgcaacattgctgctctggtactggaatggcaaaaccaatattgttggt
gataatccaagaggtgattttgcaactcctcgagccattttgacaggacatgactatgag
atcacctgtgctaccatttgtgctgaacttggcttagtaataagtggttcaaaagaagga
ccatgtctcatacattctatgaatggagatttgctgaggacgttagaaggtcctgaaaca
ttagaaggtcctgaaaattgcctgagaccaaaacttattcaagcttcaagggaaggccaa
tgtgtcatatattatgaaaatggtcttttttgtgtattcagtgtgaatgggagacttcaa
gccactatggaaacggatgacaagatcaaggcaattcagctgagtagagatggacagtat
ctgcttacgggtggagacaatggagttgtaatgatatggcagatgtgggacctgaagaag
ctttttgcttacccaggctgtgacgctggaatccgatccatggccctgtcatatgaccaa
aggtgcatactgaccgggatggcatcggggagcatagtggttttctacaacgacttcaat
cgttggcatcatgaatatcaaaccagatactga
DBGET
integrated database retrieval system
