Meleagris gallopavo (turkey): 100547778
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Entry
100547778 CDS
T01523
Symbol
KDM1B
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mgp03036
]
100547778 (KDM1B)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100547778 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Thi4
DAO
SWIRM
Pyr_redox_2
Pyr_redox
HI0933_like
Pyr_redox_3
FAD_binding_2
FAD_binding_3
FAD_oxidored
Lycopene_cycl
2-Hacid_dh_C
GIDA
NAD_binding_9
AlaDh_PNT_C
ThiF
KARI_N
NAD_binding_7
Shikimate_DH
zf-RING_2
YjeF_N
Motif
Other DBs
NCBI-GeneID:
100547778
NCBI-ProteinID:
XP_003204769
Ensembl:
ENSMGAG00000002668
LinkDB
All DBs
Position
3:complement(6530657..6557865)
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AA seq
820 aa
AA seq
DB search
MSTGRVRTKKKACSSEQSPDSLPLRSSGRQVKKKAAEATDDDDDASEKKYRKCEKAGCTA
TCPVCFASAAERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYEKYTAWKRIWTSN
GKSEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPQIAKTYRCGMKLNNSTKAE
GSDQCSMPEDLRVAEVSDHWWYSMLILPPLLKDSVAAPFLAAYYPDCVGMSPSCTSTNRL
PGESNLVKLEHLKSVPNLTVAGMNKYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIHHIIVRGLVRIRCVQEMARILYFMTRKGLI
NTGILSVSTDQYLLPKEYHNKSVIIVGAGAAGLAAARQLHNFGIKVIVLEAKDRIGGRVW
DDKTFPGVTVGRGAQIVNGCVNNPMALMCEQLGIKMHKLGEKCDLIQEGGRITDPTIDKR
MDFHFNAILDVVSEWRKDKTQHQDVPLGEKIQEIYKAFIRESGIQFSELEEKXLQFHLSN
LEYACGTNLSQVSARSWDHNEFFAQFAGDHTLLTVGYSTIIDKLAEGLDIRLNFPVQSID
YSGEEVQVTTADGTVWRTQKVLVTVPLALLQKNAIQFNPPLSEKKIKAINSLGAGVIEKI
ALQFPYRFWDSKIQGADFFGHVPPNSSQRGLFSVFYDMDPEGKQSILMSVVTGDAVTTIK
NLDDKQVLQQCMTVLRELFKEQEVPDPVKFFVTRWSKDPWLQMAYSFVKTGGSGEAYDII
AEDIQGTIFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggaagggtacgaacaaagaaaaaggcatgttcttcggagcagtctccagac
agccttcctctgaggagttctggaagacaggtgaagaagaaagcagccgaggcaacagat
gatgatgatgatgcatcagaaaagaaatacaggaaatgtgagaaagctggatgcactgca
acgtgtcccgtttgctttgccagcgcagccgaaagatgtgcaaaaaatgggtatacatct
agatggtatcatctttcctgtggggagcacttctgcaatgaatgttttgaccactactac
cgaagtcataaagatggttatgagaaatacactgcctggaaaaggatttggacaagtaat
gggaaaagtgagcccagcccaaaagccttcatggctgatcaacagctcccttattgggtg
cagtgtacaaagccagagtgtggtaaatggcgtcagctgacaaaggaaatccagctgaca
ccgcaaatagcaaaaacctacagatgtggtatgaaactaaacaattccaccaaggcggag
ggctcagaccaatgttccatgcctgaggacttgagagtggctgaagtttcagaccattgg
tggtactccatgctcatactccctcctttgctgaaagacagtgtggcagctccctttcta
gctgcatattatccagactgcgtgggcatgagtccatcctgtaccagcactaatcgttta
cctggtgaatccaaccttgtgaagttagagcacttaaagagcgtgcctaatttgactgtt
gcaggaatgaacaaatatttccaacctttttaccagcccaatgaatgtgggaaagcactt
tgtgtaaggccagatgtcatggaactggatgagctctatgagttcccagaatattcacga
gatcctaccatgtatttggccttgagaaacctgattttggctctgtggtacacaaactgc
aaggaggctcttacccctcaaaaatgtatccatcatataattgttcgagggcttgtgcgt
attcgctgtgtacaggaaatggcaaggatactctactttatgacaaggaaagggctaatt
aatacagggattttatcagtcagtactgaccagtatcttcttcctaaagaataccacaac
aaatctgtcattattgttggggctggtgcagcaggattagcagcagcccgacagctacac
aactttggaattaaggtcattgtcttagaagctaaagacagaattggtggccgagtgtgg
gacgataagacgttcccaggcgtcactgttgggagaggtgcacaaatcgtcaacggatgt
gtcaacaacccaatggcactaatgtgtgagcaacttggcattaaaatgcacaaactgggg
gagaaatgtgacttgatccaggaaggtggaaggataacagatcccactattgataaacgt
atggactttcatttcaatgccatcctagatgttgtctctgagtggagaaaagataaaacc
caacatcaagatgttcctcttggtgagaaaatacaagagatctataaagcctttattcgg
gagtcgggtatccagttcagtgagctggaagaaaagntactgcagttccatctcagtaat
ttggagtatgcctgtggcaccaatctctctcaggtatctgcacgctcatgggaccataat
gagttttttgctcagtttgctggagatcacactcttctaactgtgggatattccactatc
attgataagttggctgaagggctggacatccggttaaatttcccagtacagagtattgac
tattctggtgaagaagtacaggtcactactgcagatggaactgtgtggagaacacaaaag
gtattagtgacggttccactggctcttcttcagaaaaatgccatccagttcaatcctcca
ctgtcagaaaaaaaaattaaagctattaatagcttaggagcaggagtcattgagaagatt
gcattgcagtttccttatagattttgggatagtaaaatccaaggtgctgatttttttggt
catgttccacccaattccagccaacgtggactcttcagtgttttctatgacatggatcca
gagggcaaacaaagcattttaatgtcagtggtcactggagatgctgtgacaaccattaag
aatttagatgacaaacaagtactgcaacagtgtatgactgtacttcgagagctgtttaag
gagcaggaggttcctgacccagtgaagttttttgttactcgctggagcaaagacccttgg
ctccagatggcatatagttttgtaaaaacaggaggcagcggtgaagcttatgacattata
gctgaagacatccaaggaacaattttttttgctggtgaagccacaaacaggcactttcct
cagaccgttacaggagcttacctgagtggggttcgagaagccagcaaaatagcagcattt
taa
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