Meleagris gallopavo (turkey): 100548007
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Entry
100548007 CDS
T01523
Symbol
YBX1
Name
(RefSeq) LOW QUALITY PROTEIN: Y-box-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mgp03000
]
100548007 (YBX1)
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100548007 (YBX1)
03041 Spliceosome [BR:
mgp03041
]
100548007 (YBX1)
Transcription factors [BR:
mgp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
100548007 (YBX1)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100548007 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
100548007 (YBX1)
Spliceosome [BR:
mgp03041
]
Common components
Common spliceosomal components
General mRNP proteins
100548007 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
DUF8529
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
100548007
NCBI-ProteinID:
XP_010721320
LinkDB
All DBs
Position
23:complement(4452603..>4459869)
Genome browser
AA seq
332 aa
AA seq
DB search
CPPRGAFVCAAPPRAVPDAAPRALFFSSFAPSSNEGFGNSEMVNVRNGYGFINRNDTKED
VFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRN
HYRRYPVAGVLHATTSKTTXNSESGEKNEGAENIPEGQAQQRRPYRRRRYPPYYMRRPYG
RRPQYSNPPVQGEIVEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEED
KENQGDETQGQQPPQRRYRRNFNYRRRRPENPKPQDGKETKTAEPPAENTSAPEAEQAGL
SKYRLNISTIIRFSHQRKDLRNEEEKKMKFQQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
tgtccgccacgcggggcctttgtgtgcgccgccccgccacgtgccgtgcctgacgccgcg
ccccgcgctctcttcttctcctccttcgctccctccagcaacgaaggttttgggaacagt
gaaatggttaacgtacggaacggttacggcttcatcaacaggaatgacaccaaggaagat
gtgtttgtccatcagactgccataaagaagaataaccccaggaagtacctccgcagcgta
ggagacggagagaccgtggagtttgatgtggttgaaggagagaagggtgcggaggcagcg
aacgtgacagggcctggtggcgttccagtgcaaggcagcaaatacgcagcagaccgtaac
cattacagacgatatccggtcgcaggggtcctccacgcaactaccagcaaaactaccnag
aacagtgagagtggggagaagaacgaaggagcagagaacatcccggaaggccaagcccag
cagcgccgtccctatcgcaggcggcggtacccaccttactacatgcgtaggccctacggg
cgtcgaccacaatattccaaccctcccgtgcagggagagatagtggagggtgctgacaac
caaggtgcaggagagcaaggcagaccagtcaggcagaacatgtatcgaggttacagacca
cgattccgcaggggtcctcctcgtcaaagacagcctagagaggatggaaacgaagaagat
aaagagaaccaaggggatgagacccaaggtcagcagccacctcaacgtcggtaccgtcgt
aacttcaactacagacgcagacgcccagagaaccctaaaccacaagatggcaaagagacg
aagacagccgaaccaccagctgagaacacgtccgctcccgaggccgagcaggcggggctg
agtaaataccggcttaacatctctaccatcatccggtttagtcatcaaagaaaagactta
agaaatgaagaagaaaagaaaatgaaattccagcaataa
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