Meleagris gallopavo (turkey): 100549104
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Entry
100549104 CDS
T01523
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100549104 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgp03021
]
100549104 (CPSF3)
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100549104 (CPSF3)
Transcription machinery [BR:
mgp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100549104 (CPSF3)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100549104 (CPSF3)
U7-dependent histone pre-mRNA processing factors
100549104 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100549104
NCBI-ProteinID:
XP_010706225
Ensembl:
ENSMGAG00000013995
LinkDB
All DBs
Position
2:93584265..93602178
Genome browser
AA seq
738 aa
AA seq
DB search
MPPGGWGREAEGRPSVRSAPLRGGAPLRLGQPAGAARKEPPAPCLSGASGVRDAGTHRNQ
RHRGRLPKSGGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLL
LISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETD
LEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRH
LMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQ
ELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKH
ISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHI
MSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARL
KAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVK
RNFNYHILSPCDLSNYTDLAMSTVTQTLAIPYTGPFNLLFYQLQKLTGDVEEIEIQQKPA
LKVFKSITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKIQKAAVQKVSTKVDM
EEYRKRMEMMLQDMFGEDCVSSKEGSILCVTVDGKTANLSLETRTADCEPGSEDDESLRE
MVELAAQRLYDALSPVYC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggggggatggggccgggaggcggagggccgtccgtccgttcggagcgctccg
ttgcgtgggggagcgccgctccggctcgggcagcccgcaggagcggctcggaaggaacct
cccgccccctgcctgtctggtgcttcgggagtcagggatgcgggcacgcatcgcaaccag
cgacaccgcggccgtcttccaaaatccggaggagctggccaagaagtaggaagatcatgc
attattctggagtttaaaggaaggaaaataatgcttgattgtggcatccatcctggactg
gaaggaatggatgctcttccttacattgacttgatagaccctgctgagattgacctcctg
ctgattagccatttccatttagatcactgtggagctttgccatggtttttgcagaaaaca
agttttaaaggaaggacgtttatgactcatgccacaaaagctatttacagatggcttctt
tcagactatgtcaaagtcagtaatatatcagcagatgacatgctgtatacagaaacagac
cttgaagaaagcatggataagattgaaaccatcaattttcatgaagtgaaggaggtggca
ggcatcaagttctggtgctaccatgcgggccacgttctgggagcagccatgttcatgatt
gaaatagctggtgtgaagcttttgtatacaggtgatttctcaagacaggaagacagacat
ctgatggcagctgagattcccaatattaaacccgatattcttataattgaatccacctac
gggactcatattcatgagaaaagggaagagcgagaggcacggttctgtaacaccgttcac
gacattgtaaatagaggagggagaggccttattcctgtgtttgccctgggtcgggcacaa
gaactacttttaattttggatgaatactggcaaaatcatcctgagctccacgacatcccc
atttactacgcctcctctttggcaaagaagtgcatggccgtttatcagacatatgtcaat
gccatgaatgacaaaatccgcaagcaaatcaacatcaacaatccatttgttttcaagcat
attagcaatctgaagagtatggatcattttgatgatattggcccaagcgttgtgatggct
tccccaggtatgatgcagagtggtttatccagagagctgtttgagagctggtgcacagat
aagagaaatggagtaattatagctgggtactgtgttgaaggaacgctggctaagcatatc
atgtctgaacctgaagagatcacaactatgtcagggcaaaaacttcctctgaagatgtct
gtggattacatttctttctctgctcacacagattatcaacaaaccagtgagtttatccgg
gccctgaaacctcctcacgtgattttagttcatggtgagcagaatgaaatggccagattg
aaggcagcactgataagggaatatgaagataacgatgaagttcacatagaagttcataat
cctaggaatactgaagctgtgacattaaacttcagaggagaaaaacttgcaaaggtgatg
ggatctttggcagataagaagccagagcaaggacagagaatttctggaatcctggtcaaa
agaaattttaactatcacatcctttctccatgtgacctctccaattatacagacttggct
atgagcactgtaacacagacactggctattccctacaccggccctttcaatctgctcttc
tatcagctgcaaaagcttactggtgatgtagaggaaatagaaatccaacaaaaaccagcc
ctgaaggtcttcaaaagtattactgtaatccaggaaccaggcatggtagtccttgagtgg
gtggcaaatcctgctaatgatatgtatgcagacaccgtgaccacagtgatattggaagtt
cagtcaaatcctaaaatacagaaagctgcagtgcaaaaagtttccacgaaagtcgacatg
gaggagtatcgcaagagaatggaaatgatgcttcaggatatgtttggagaagactgtgta
agttcaaaagaaggctctattctgtgtgtcacagtagatggcaagactgcaaacctttca
ctggaaactcggacagctgactgtgagccaggaagtgaagatgacgaatccctgcgtgaa
atggtggaactggctgcgcagaggctctacgatgcgctcagcccagtgtactgctga
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integrated database retrieval system
