Meleagris gallopavo (turkey): 100549198
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Entry
100549198 CDS
T01523
Symbol
IFT88
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mgp03037
]
100549198 (IFT88)
Cilium and associated proteins [BR:
mgp03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100549198 (IFT88)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_7
TPR_12
TPR_6
TPR_8
TPR_19
TPR_16
TPR_14
ARM_TT21_4th
TPR_10
ANAPC3
TPR_11
TPR_9
TPR_17
ARM_TT21_2nd
ARM_TT21_C
FumaraseC_C
TPR-S
Motif
Other DBs
NCBI-GeneID:
100549198
NCBI-ProteinID:
XP_010727360
Ensembl:
ENSMGAG00000015130
LinkDB
All DBs
Position
1:complement(177966899..177982679)
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AA seq
571 aa
AA seq
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MMQNVHLAPEEDEDDLYSGYNDYNPTFDTEDLENDTAFQQAARTSHGRRPPVTAKIPGTA
TSRPIDTAFGSKATLNSSMGRPMTGAVQDGVARPMTAVQAAGYTKAAMRGSLFDPLGQAR
GPAPPLEMKNPDSSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKERVLVR
QREQTATSESINLDLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFNNGGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYMDAISSFEHIMS
LSPNLKAGFNLIVCYFAIGDSEQMKKAFQKLIAVPLEVDYDDKYVSANDDPHTNLLIEAI
KNDSLRQIERERKSLAEDYIMTAAKLIAPVIETSFAVGYDWCVEAVKASHYVELANDLEI
NKATTYLRQRDFNQALETLKMFXKKDSRVKSAAATNLSFLYYLENELAQATNYADLAVSS
DRYNPAALTNKGNTVFANEDYEKAAEFYKEALRNDCSCTEALYNLGLTYKKLNRTDEALD
CFLKLHAILGNSAQVLHQIADMYPFLCYDKG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagaacgtgcacctagctcctgaggaagacgaggatgatctttactctggctac
aacgattataatcccacttttgacacagaggatttagaaaatgatacagcttttcaacag
gcagcaagaacaagtcatggtagaagaccccctgtgacagccaaaattcctggtacagca
acttcaagacctatagatactgcatttgggtcaaaggcgactttaaattcatctatggga
agaccaatgacaggagcagtgcaggatggggttgctcggccaatgacagcggtgcaagct
gcaggttacactaaggcagctatgagaggttctttatttgatcctcttggccaagcaaga
ggtcctgctccacctctggaaatgaaaaatccagacagctcagaagagaagattaggcag
ttagaaaaaaaagtgaatgaactggttgaagaaagttgcattgccaacagctgtggagac
ttgaaattggctctggaaaaagcaaaagaagctggaagaaaggaaagagtattagtgagg
caacgtgaacaaactgctacttcagaaagcatcaacttagatctcacttactcagttctt
ttcaatctggccagtcagtatgctgctaatgaaatgtatgctgaagcactgaacacttac
caagttatagtgaagaataagatgttcaacaatggaggtagactgaaggtcaatatggga
aatatatatttaaaacaacggaactattccaaagctatcaagttctaccgcatggctcta
gaccagattcctagtgtccacaaagagatgaggattaaaataatgcaaaatattggagtt
gcatttattaaaactggccagtacatggatgccatttcttcatttgaacatattatgagc
ttgtccccaaacttgaaggcaggcttcaacctgattgtatgttactttgctattggagac
agtgaacaaatgaaaaaagcattccaaaaactgattgcagttcccttggaagtggattat
gatgacaaatacgtttctgcaaatgatgatccacatacaaatctattgattgaagccatc
aaaaacgacagtttaagacaaatagaacgtgagaggaagtccctggcagaggattatatc
atgacagctgctaaactgatagcaccagtaattgagacatcctttgctgtgggctatgac
tggtgtgttgaagcagtaaaagcttcccactacgtagagttagccaatgacctggagata
aataaagccactacttatttgagacaaagggattttaaccaggcactggagactttaaaa
atgtttngaaaaaaggatagcagagtaaagagtgcagctgcaacaaacctttcgttcctt
tattatttggagaatgaattggcacaagcaacaaactatgcagatttagctgtcagttct
gataggtacaacccagcagcactaactaacaaaggaaatactgtttttgcaaatgaagac
tacgaaaaagcagctgagttttataaagaggctctcaggaatgattgctcttgcactgaa
gcactttataaccttggtttaacatacaagaagttaaacagaacagatgaagctttggat
tgtttcctgaaactccatgcaatacttggaaatagtgcccaggtccttcaccaaatagca
gacatgtatccttttctgtgttatgataagggatga
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