Meleagris gallopavo (turkey): 100549334
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Entry
100549334 CDS
T01523
Symbol
POLB
Name
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100549334 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgp03400
]
100549334 (POLB)
Enzymes [BR:
mgp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100549334 (POLB)
DNA repair and recombination proteins [BR:
mgp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100549334 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
100549334 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
HHH_2
Cdd1
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
100549334
NCBI-ProteinID:
XP_010721457
Ensembl:
ENSMGAG00000002846
LinkDB
All DBs
Position
24:complement(2745652..2753605)
Genome browser
AA seq
335 aa
AA seq
DB search
MSKRKAPQESLNQGITDFLMELANYERNVNRAIHKYNAYRKAASVISRYPSRIRNGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTSASINFLTRVTGIGPAAARKFVEEGIK
TLEDLRKNEHKLTHHQRIGLKYFEDFEKRIPREEMLQMQEIVLKEVENVDPNYIATVCGS
FRRGAESSGDMDVLLTHPTFTSESSKQSKLLHQVVEQLEKVHFVTDVLSKGDTKFMGVCQ
LPNKDDGTSYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEMGFTINEYTIRP
LGVTGVAGEALPVECEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcggaaggcgcctcaggagagcctcaaccagggcatcacagacttcctcatg
gagctagcgaattacgagcgcaacgtgaaccgagccatccacaagtacaacgcctacagg
aaagcggcctctgtcatctcccggtaccccagcagaatacggaatggagccgaagctaag
aagctggatggagtaggtgctaaaatagctgagaaaatagatgagtttttatctactgga
aagcttcgcaaattggaaaagattcgacaagatgatacaagtgcttccatcaacttcctg
acacgagttactggcattggtcctgctgctgctaggaagtttgttgaggaaggaattaag
actttagaagatctaagaaaaaatgagcacaagctgacccatcaccagcgaattgggttg
aaatattttgaagattttgagaaaagaatcccaagggaagaaatgttgcaaatgcaggaa
attgtgctgaaagaggtggagaacgtggacccaaattatattgctacagtctgtggcagt
tttaggcgaggtgcagagtcgagtggtgatatggatgttctcttaacccatccgactttc
acatctgaatcatccaaacagtcaaagcttctgcatcaagttgtagaacaactggaaaaa
gtccactttgtcactgatgtgctgtctaaaggtgacaccaaattcatgggtgtctgccag
ctgccaaataaagatgatggaacatcttatccacataggagaattgatattcggcttatc
cctaaagatcagtattactgtggtgtactgtatttcacaggcagtgatatattcaataag
aacatgagagcccatgctctggaaatgggcttcacaatcaacgagtatacaatccgtccc
ttgggtgtcactggagtcgctggggaggccctaccagtagaatgtgagaaagacatcttt
gactacatccagtggaaataccgagagccaaaggatcggagtgaataa
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