KEGG   Meleagris gallopavo (turkey): 100549394
Entry
100549394         CDS       T01523                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
mgp  Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mgp04131]
    100549394 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mgp04147]
    100549394 (COPA)
Membrane trafficking [BR:mgp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100549394 (COPA)
Exosome [BR:mgp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100549394 (COPA)
  Exosomal proteins of bladder cancer cells
   100549394 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 100549394
NCBI-ProteinID: XP_003213999
Ensembl: ENSMGAG00000006128
LinkDB
Position
27:complement(521173..539538)
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAENLKETFDP
EKETIPDIDPSAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDNV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEH
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgttgactaaattcgagaccaaatcggctcgggtgaaagggctcagcttccaccccaag
aggccttggatccttaccagcctacataatggcgtcatccagctctgggactatcgcatg
tgcacccttatcgacaagttcgacgagcacgatggccctgttcgaggtattgatttccac
aagcagcagcctctgtttgtttctggaggtgatgactataaaataaaggtctggaactac
aaactgcgccgctgccttttcactctgcttgggcatttggactacatccgcaccaccttc
ttccatcatgaatatccatggatcttgagtgcttctgatgatcagactattcgggtttgg
aactggcagtccagaacttgtgtctgtgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtacgc
gtttgggatatttctggcttaaggaagaagaacctgtcccctggggctgtggagtcggat
gtcagaggaataactggggtggatttgtttgggacaacagatgcagttgtgaagcacgtt
cttgagggccatgatcgtggagtgaattgggctgccttccatcccacaatgccactgatt
gtgtcaggagctgatgatcgacaagtgaagatctggaggatgaatgaatcaaaggcctgg
gaggttgacacttgccgggggcattacaacaatgtctcgtgtgctgtctttcaccctcgg
caggaactgatcctcagcaattcagaggacaaaagcatccgtgtctgggatatgtcaaaa
cgcacgggtgtccagaccttccgccgtgatcacgatcgcttttgggtattggctgctcat
cccaatctcaacctctttgctgcaggccatgatggtggcatgattgtgtttaaactggag
cgtgagcgtcctgcttatgcagtgcatgggaatatgctgtattatgtgaaggaccgattc
ctccgccaacttgactttaacagctcaaaagatgttgctgtcatgcagctgcgcagtggt
tccaagttccctgtgttcaacatgtcatacaacccagctgagaatgctgtccttctctgc
acaagagcaagcaacttggagaatagcacttatgacctatacaccattcccaaggatgca
gactcccagaatccagatgcccctgaagggaagcgctcctcggggctaacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctcatcaaaaacttg
aagaatgagatcacaaagaaggttcaggtgccgaactgtgatgagattttctatgctggc
acagggaacctgttactgagagatgcagactccatcaccctctttgacgtgcagcagaag
cggactctggcctcagtgaagatatccaaggtgaaatatgtcatctggtcagctgacatg
tcccacgtagctctgctggctaagcatgccatcatgatctgcaacagaaagctggaatca
ctgtgtaacatccatgaaaacatccgtgttaagagcggtgcctgggatgaaagtggtgtt
ttcatctataccaccagcaaccacatcaaatatgctgtcaccacaggggatcatggcatc
atccgcaccctggacctgcctatctatgttactcgtgtgaaggggaacaatgtgtactgc
ctggacagagaatgtcgccccagggtcctgaccattgatcccacagagttcaaattcaag
ctggcattgatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaagctt
gtgggtcagtccatcattgcctacctgcagaaaaagggttatcctgaggtggccctgcac
tttgtcaaggatgagaagacccgtttcagtctggcactggagtgtggcaacattgagatt
gctctggaagcagccaaggctctggatgacaagaattgctgggagaaactgggagaagtg
gcactactgcagggaaatcaccagattgtggagatgtgctaccagcgcaccaagaacttt
gataggctctccttcctctatcttattactggcaacctggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactaccagaatgccttgtatctagga
gatgtggcagagagagtgaggatcctgaagaactgtggacaaaagtccctggcctatctc
acagctgcaactcatggtctggatgaggaagctgaaaacctgaaggaaacattcgatcct
gaaaaggaaacgattccagacattgatcccagtgcaaaactactacagcctcctgctcct
gtcatgcctctagataccaactggccattgctgactgtctccaaagggttctttgaagga
acaattgctagcaaaggcaaggggggtgccttggctgctgacatagatattgacaatgtt
ggtactgaaggctggggagaagatgcagaattacagctcgatgaagatggctttgtggat
gctggagaaggctttggagaggaaggtctgggtaaaggacaggaagaaggaggtggatgg
gaagttgaagaagatttggatcttcctcctgaactggatgttcctgctggtccagcagga
ggagcagaagatgggttctttgtgccacccaccaagggcaccagcccagcgcaggtgtgg
tgtaacaattcacagcttcctgttgaccatattctagcaggttcctttgagacagcaatg
agactcctccatgaccaggtgggagtaacaaactttggaccctacaagcagctgttcctg
cagacctatgcccgtggccgtacaacctaccaagctctgccatgtctccctaccatgtat
ggctacccacatcgcaactggaaagaagctggcttgaagaatgccctcccagctgttggg
ctgaagctcaatgacctgattcagcgcttacagctgtgttaccagctcacaacagctggc
aagtttgaggaggctgtggagaagttccgctccatcttgctgagtgtgcccttgctggtg
gtggacaataagcaagagattgctgaggcccagcagctgatagccatttgtcgggagtat
attgtaggactctcgatggagattgagcggaagaagctgcccaaggagaccttggagcac
cagaagcgaatctgtgagatggctgcctatttcacccactccaacctgcagcctgtccac
atgattttggtactgcgcactgctctcaacctcttcttcaaactcaaaaacttcaagaca
gctgctacttttgctcgtcggctgctggagctgggtccaaagcctgaggtggcccagcag
acccgcaagatcttgtcagcatgtgagaagaatcccaccgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctatcgtggcaag
cctgtggagaagtgtccactcagtggagcttgctactgccctgagtttcaggggcagatc
tgccgtgtcacaacagtaacagagattggcaaagatgtcattgggctgcggatcagcccc
ctccagttccgctga

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