Meleagris gallopavo (turkey): 100549394
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Entry
100549394 CDS
T01523
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
mgp
Meleagris gallopavo (turkey)
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mgp04131
]
100549394 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgp04147
]
100549394 (COPA)
Membrane trafficking [BR:
mgp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100549394 (COPA)
Exosome [BR:
mgp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100549394 (COPA)
Exosomal proteins of bladder cancer cells
100549394 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
100549394
NCBI-ProteinID:
XP_003213999
Ensembl:
ENSMGAG00000006128
LinkDB
All DBs
Position
27:complement(521173..539538)
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAENLKETFDP
EKETIPDIDPSAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDNV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEH
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaaattcgagaccaaatcggctcgggtgaaagggctcagcttccaccccaag
aggccttggatccttaccagcctacataatggcgtcatccagctctgggactatcgcatg
tgcacccttatcgacaagttcgacgagcacgatggccctgttcgaggtattgatttccac
aagcagcagcctctgtttgtttctggaggtgatgactataaaataaaggtctggaactac
aaactgcgccgctgccttttcactctgcttgggcatttggactacatccgcaccaccttc
ttccatcatgaatatccatggatcttgagtgcttctgatgatcagactattcgggtttgg
aactggcagtccagaacttgtgtctgtgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtacgc
gtttgggatatttctggcttaaggaagaagaacctgtcccctggggctgtggagtcggat
gtcagaggaataactggggtggatttgtttgggacaacagatgcagttgtgaagcacgtt
cttgagggccatgatcgtggagtgaattgggctgccttccatcccacaatgccactgatt
gtgtcaggagctgatgatcgacaagtgaagatctggaggatgaatgaatcaaaggcctgg
gaggttgacacttgccgggggcattacaacaatgtctcgtgtgctgtctttcaccctcgg
caggaactgatcctcagcaattcagaggacaaaagcatccgtgtctgggatatgtcaaaa
cgcacgggtgtccagaccttccgccgtgatcacgatcgcttttgggtattggctgctcat
cccaatctcaacctctttgctgcaggccatgatggtggcatgattgtgtttaaactggag
cgtgagcgtcctgcttatgcagtgcatgggaatatgctgtattatgtgaaggaccgattc
ctccgccaacttgactttaacagctcaaaagatgttgctgtcatgcagctgcgcagtggt
tccaagttccctgtgttcaacatgtcatacaacccagctgagaatgctgtccttctctgc
acaagagcaagcaacttggagaatagcacttatgacctatacaccattcccaaggatgca
gactcccagaatccagatgcccctgaagggaagcgctcctcggggctaacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctcatcaaaaacttg
aagaatgagatcacaaagaaggttcaggtgccgaactgtgatgagattttctatgctggc
acagggaacctgttactgagagatgcagactccatcaccctctttgacgtgcagcagaag
cggactctggcctcagtgaagatatccaaggtgaaatatgtcatctggtcagctgacatg
tcccacgtagctctgctggctaagcatgccatcatgatctgcaacagaaagctggaatca
ctgtgtaacatccatgaaaacatccgtgttaagagcggtgcctgggatgaaagtggtgtt
ttcatctataccaccagcaaccacatcaaatatgctgtcaccacaggggatcatggcatc
atccgcaccctggacctgcctatctatgttactcgtgtgaaggggaacaatgtgtactgc
ctggacagagaatgtcgccccagggtcctgaccattgatcccacagagttcaaattcaag
ctggcattgatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaagctt
gtgggtcagtccatcattgcctacctgcagaaaaagggttatcctgaggtggccctgcac
tttgtcaaggatgagaagacccgtttcagtctggcactggagtgtggcaacattgagatt
gctctggaagcagccaaggctctggatgacaagaattgctgggagaaactgggagaagtg
gcactactgcagggaaatcaccagattgtggagatgtgctaccagcgcaccaagaacttt
gataggctctccttcctctatcttattactggcaacctggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactaccagaatgccttgtatctagga
gatgtggcagagagagtgaggatcctgaagaactgtggacaaaagtccctggcctatctc
acagctgcaactcatggtctggatgaggaagctgaaaacctgaaggaaacattcgatcct
gaaaaggaaacgattccagacattgatcccagtgcaaaactactacagcctcctgctcct
gtcatgcctctagataccaactggccattgctgactgtctccaaagggttctttgaagga
acaattgctagcaaaggcaaggggggtgccttggctgctgacatagatattgacaatgtt
ggtactgaaggctggggagaagatgcagaattacagctcgatgaagatggctttgtggat
gctggagaaggctttggagaggaaggtctgggtaaaggacaggaagaaggaggtggatgg
gaagttgaagaagatttggatcttcctcctgaactggatgttcctgctggtccagcagga
ggagcagaagatgggttctttgtgccacccaccaagggcaccagcccagcgcaggtgtgg
tgtaacaattcacagcttcctgttgaccatattctagcaggttcctttgagacagcaatg
agactcctccatgaccaggtgggagtaacaaactttggaccctacaagcagctgttcctg
cagacctatgcccgtggccgtacaacctaccaagctctgccatgtctccctaccatgtat
ggctacccacatcgcaactggaaagaagctggcttgaagaatgccctcccagctgttggg
ctgaagctcaatgacctgattcagcgcttacagctgtgttaccagctcacaacagctggc
aagtttgaggaggctgtggagaagttccgctccatcttgctgagtgtgcccttgctggtg
gtggacaataagcaagagattgctgaggcccagcagctgatagccatttgtcgggagtat
attgtaggactctcgatggagattgagcggaagaagctgcccaaggagaccttggagcac
cagaagcgaatctgtgagatggctgcctatttcacccactccaacctgcagcctgtccac
atgattttggtactgcgcactgctctcaacctcttcttcaaactcaaaaacttcaagaca
gctgctacttttgctcgtcggctgctggagctgggtccaaagcctgaggtggcccagcag
acccgcaagatcttgtcagcatgtgagaagaatcccaccgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctatcgtggcaag
cctgtggagaagtgtccactcagtggagcttgctactgccctgagtttcaggggcagatc
tgccgtgtcacaacagtaacagagattggcaaagatgtcattgggctgcggatcagcccc
ctccagttccgctga
DBGET
integrated database retrieval system