Meleagris gallopavo (turkey): 100549478
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Entry
100549478 CDS
T01523
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04136
Autophagy - other
mgp04140
Autophagy - animal
mgp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100549478 (ATG16L1)
04136 Autophagy - other
100549478 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100549478 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mgp04131
]
100549478 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
mgp03029
]
100549478 (ATG16L1)
Membrane trafficking [BR:
mgp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
100549478 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
100549478 (ATG16L1)
Mitochondrial biogenesis [BR:
mgp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100549478 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_RFWD3
eIF2A
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR19_1st
Ge1_WD40
CCDC93_CC
Beta-prop_SPT8
INO80F
ZapB
Fez1
WD40_like
HTH_6
Lipoprotein_6
PALB2_WD40
AP5B1_middle
HEF_HK
PUMA_CC
V_ATPase_I
WH_CYT4
FUSC
Motif
Other DBs
NCBI-GeneID:
100549478
NCBI-ProteinID:
XP_010714892
Ensembl:
ENSMGAG00000001750
LinkDB
All DBs
Position
11:complement(11296846..11316282)
Genome browser
AA seq
562 aa
AA seq
DB search
MQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDDIE
VLADETSDTAEETSPVRAVSRTPSKRLSQPAGGLLDSITNIFGLSESPLLGHQSSDAARR
RSLSSFPAPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRR
VKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLT
GHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSG
HFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQT
FSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSSINAVAW
SPAGAHVVSVDKGNKAVLWSEF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagacatgagatcagtccaggacacgatggcacatggaatgatgctcagtta
caggaactggcacagctgaagataaagcatcaagaggagctgactgagctacataagaaa
cgtggagagttggcccagtctgtaattgatctgaataaccaaatgcagcagaaggacaaa
gagatgcagatgaatgaagcaaagattgcagagtatttgcaaaaaatctctgaactggaa
acagagtgccaggaactacgcagcaagctacaagatcttgagcgagctaatcagacactg
aaagatgaatatgatgctctccagatcaccttcaacgccttggaggagaaactgaggaaa
acaactgaagataaccaggagctggtctcacgttggatggcagagaaagcacaggaagcc
aatcgcttgaatgcagaaaatgaaaaggattcgaggaggcgacaagccaggctgcagaag
gagctagcagaagctgccaaagaacccctgcctgttgaacccagggatgatgacattgaa
gtgcttgcagatgaaacctctgacacagctgaggagacatctccagtgcgagctgtcagc
cgaacgcccagtaagcgactctcccagccagctggaggccttctggactctatcactaat
atctttggtctgtctgagtctccccttttgggacatcaatcttccgatgctgccaggagg
cgttctttgtcctcgttccctgctccccaggataatgcagagccacatccgggtgccagt
aaagaagtgagagtgcccactactgccatatgtgtctttgacgcacatgacggggaggtg
aacgcggtgcagttcagccctggctcccggttactggcaacaggaggcatggaccgcagg
gttaagctctgggaagtcttgggagataggtgtgagcccaaaggttccctctctggtagt
aatgctgggattacaagcatagagtttgatagtgctggttcttacctcttagcagcttca
aatgactttgccagcagaatctggacggttgatgacaatcgattacggcacactctgaca
ggtcacagcggtaaggttctgtctgccaagttcttgctggacaacgcacgcattgtgtca
ggaagccacgaccggaccctcaagctctgggacctccgtagcaaagtttgtataaaaaca
gtgtttgcaggatctagctgcaatgacatcgtatgcactgagcaatgtgtaatgagtgga
cattttgataagaaaatccgtttctgggatatcagaactgaaagcatagtaaaagaactg
gagctgcttgggaggatcacagctctggacttgaactcggagcgaacagagcttttgacc
tgttcccgtgatgatctactgaagatcatcgacctgcgggttggtgctgtcaagcagaca
ttcagtgcccagggattcaaatgtggctctgactggacaagagttgtgttcagtcctgat
ggtaactatgtggctgctggttcagctgatggtgccctctacgtttggaatgtactcact
gggaagttggagagaactcttgccaagcatcacagttcttctatcaatgcagtcgcgtgg
tccccagcgggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtcctgtggtct
gaattttga
DBGET
integrated database retrieval system
