Meleagris gallopavo (turkey): 100549534
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Entry
100549534 CDS
T01523
Gene name
RAD50
Definition
(RefSeq) DNA repair protein RAD50 isoform X2
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03440
Homologous recombination
mgp03450
Non-homologous end-joining
mgp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100549534 (RAD50)
03450 Non-homologous end-joining
100549534 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100549534 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgp03032
]
100549534 (RAD50)
03400 DNA repair and recombination proteins [BR:
mgp03400
]
100549534 (RAD50)
Enzymes [BR:
mgp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.- Acting on acid anhydrides
3.6.-.-
100549534 (RAD50)
DNA replication proteins [BR:
mgp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100549534 (RAD50)
DNA repair and recombination proteins [BR:
mgp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100549534 (RAD50)
BRCA1-C complex
100549534 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
100549534 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
AAA_21
SbcCD_C
DUF2703
AAA_29
AAA_16
Motif
Other DBs
NCBI-GeneID:
100549534
NCBI-ProteinID:
XP_003210540
Ensembl:
ENSMGAG00000008972
LinkDB
All DBs
Position
15
AA seq
1312 aa
AA seq
DB search
MAKIEKMSILGVRSFGVEDKDKQIITFFNPLTILVGPNGAGKTTIIECLKYISTGDFPPG
TKGNLFVHDPKVANETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISALGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRLKQGMKVKECQTELKYLKQNKEKAQEIQDNLANTEAQLSASKEN
IKSIESQLDPLKSSLAAVEKNLAKVMSLDNDVKALESRRRQMEKDNQDLQQKMEKVFQGT
DEQLRDRYKNHQRTVKEKEKRLSDCKRELDRASKECQRFNNEKSELLIERGRLQLQADRH
QEHIKVRDSLIQSLSAQLELDGFEQAPFNDRQIAVFHELLKERQKSDTEAANQLMREFTQ
KEAMKQKQIDEIRDRKTGLERTIDLKSDIQNKRQAELKNVKYELRQLEGSSDRIVELDQE
IIKTEHELEKAERNSNVETLEQEVQTLQNEKINLDKVLRRLDQEMEQLNLHTTTITQMEM
LKKDKADKEEQIRKVKLRHSEELTLLLGYFPNKKQLEDWLHGKSTEINETRNKHALLNKQ
LASAEQQKNYISAELRKKEEQLSSYEAKLFDVCGSQDFDSNLNKLQDEIERSSKQRAVLA
GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTEFELK
KREKKRDEMMGLKPIRQTVAELQERDIPDLRNRLQTVNRDFARLKGEIEEQETLLQTVLS
EKEGANACLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLNRTVLQVSQEKQEKKHLWD
TVTSKIELNQKMKQEQQNQIQELKSTVNELRAEKLQISSSLQRRQQLEEQTVELTTEVQS
LYREIKEAKEQIFPLDATLEKLQQDKEDLINKRTASNKEIQEKMNGIKEKVKDINKYMKE
IESYIQQGKEEYKKQKECELDEVNSQLAACEKQKEKISKEMEIIRQDIDTQKIQERWLED
NLTLRQRNEELKRVEDDIKQLVKEMGEMKVPQLKNEQKHFEEKIEALKRNHHVAQGRQRG
FEEQIVRFKKELRESQFKDAEEKHREMMIVMRTTELVNKDLDIYYKALDKAIMTFHSMKM
QEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR
NFQLLVITHDEDFVELLSRSEYVETFYRIKKNIDQCSEIMKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggccaagattgagaaaatgagcatcctgggagtgaggagtttcggtgtggaggacaaa
gacaaacaaattatcaccttctttaatcccctgactattctggtgggacccaacggcgca
gggaaaacgaccatcatcgagtgccttaaatacatctccactggagatttccctcctggt
accaaaggaaatttgtttgttcatgacccaaaggttgccaacgaaacagatgtgagagct
cagattcgactgcagtttcgagatgttaatggagagctcgtagctgtccaacgatccatg
gtttgtacccagaaaagcaagaaaacagaatttaaaacacttgaaggggtcattaccaga
acaaagcatggcgagaaggtcagtctcagttccaagtgtgcagaaattgatcgggagatg
atcagtgccctcggcgtttccaagtcagtgcttaacaatgtcattttctgccaccaagaa
gaatccaactggccattaagcgaagggaaggccctgaaacaaaagtttgatgagatcttc
tcagcaacaaggtatattaaagcactggaaaccctccgtcaagtacggctgaagcaaggc
atgaaagtaaaagagtgtcagacagaactgaaatacctaaaacagaataaagaaaaagcc
caggaaatccaggacaatcttgccaacacagaagctcagctgtctgcttctaaggagaat
ataaaatctattgagagccagctcgaccccttaaagagttctctggcagcagttgagaag
aatctcgcaaaagtaatgtcactggacaacgatgtgaaagccctggagagcaggaggagg
cagatggaaaaggataatcaagatctgcaacagaaaatggaaaaggtttttcaaggaaca
gacgaacagctcagggacagatacaagaaccaccagagaacagtgaaggaaaaggagaag
aggttatcagactgtaagcgagaattagatagagcctctaaagaatgccagaggtttaac
aatgagaagtcagaactacttattgaacgaggtcgtctacagctgcaagcagatcgtcac
caagagcacatcaaagtgagggattccttaattcagtctttgtcagcacagctggaatta
gatggctttgagcaggcaccttttaatgacagacagattgctgtttttcatgagctattg
aaagagaggcagaagagtgatacagaagctgcaaatcagttaatgagagagttcacacag
aaagaagcaatgaaacaaaagcagattgatgaaataagagataggaagactgggttagag
agaaccattgacctgaaatcagacattcaaaataagaggcaggctgaactgaagaatgta
aagtatgagctgcgtcagttggagggctcttcagacagaatagtggagttggatcaggag
atcataaagacggagcatgagctggagaaagctgagaggaacagcaatgtagaaactctg
gaacaggaagtgcaaactctgcagaatgagaaaatcaacctggacaaagttcttcggagg
ttggaccaggagatggagcagctgaatctacataccacaactattacccaaatggagatg
ctgaagaaagacaaagcagacaaagaggagcagattagaaaagtaaaattgagacattct
gaagaactgacactactgctggggtatttcccaaacaaaaaacaacttgaagactggctt
catggcaaaagcactgagattaacgagacaaggaataaacatgccctgctaaacaaacaa
ctggcttcagcagaacagcagaaaaattacatcagtgctgaactaagaaaaaaagaagaa
cagttgtccagctatgaagcaaagctttttgatgtttgtggaagccaagattttgacagt
aacctgaacaaactgcaagatgagattgaaagaagttcaaagcagcgagctgtgcttgct
ggagccactgcagtttattcacagttcattacacagctgacagaggagaaccagtcgtgt
tgtccagtttgccaaagagtttttcaaacagaggctgaactgcaagatgtgatcagtgat
ctgcagtcaaagctgcgtctcgccccagacaaactgaagtcaacagagtttgagcttaaa
aaaagagagaaaaaacgtgatgagatgatgggtcttaaaccaattaggcaaactgtagcg
gaactccaagaaagggacataccagacttgaggaacaggctgcagactgtgaacagggat
tttgcacgcctgaagggtgagatagaagaacaggaaacacttttgcaaacagttctgtct
gaaaaggaaggtgctaatgcatgtttgcaggacataactctcatggaaaggtaccagact
gatattagggacgttgaaagaaaaattgctcagcaggaggctaagctgctaggggtcgat
ttaaatagaactgttctgcaagtaagccaagagaaacaagagaaaaaacacttgtgggat
acagttaccagtaaaattgagttaaatcagaaaatgaagcaagagcagcaaaatcaaatt
caggagctgaagagtacagtgaatgaactcagagcagagaaacttcagatttccagcagc
ttgcagcgtcgtcagcaactggaggaacaaacagtggaattaaccactgaagttcagtcc
ttatacagagagatcaaggaagcaaaagaacagatatttcctctggatgcaactttagaa
aaactgcagcaagacaaggaggatctaattaataaaaggactgcaagtaataaagaaata
caagagaagatgaatggcataaaagagaaagttaaagatataaataagtacatgaaagaa
attgaaagctatattcaacaaggaaaggaagaatacaagaagcaaaaggagtgtgaactc
gatgaagtaaattctcagttagctgcctgtgagaaacagaaggaaaagattagtaaagag
atggaaattattcgacaggatattgacactcaaaaaatccaggagagatggctggaggat
aatcttactttgaggcagcggaatgaagagctaaaaagagttgaagacgatataaaacaa
cttgtcaaggagatgggagaaatgaaagttccacagctgaaaaacgaacaaaaacatttc
gaggagaaaatagaagctctgaaaagaaaccatcacgttgcacagggccgacagcgtgga
tttgaggaacagattgttcggtttaaaaaggagcttcgagagtcacagttcaaggatgca
gaggaaaagcacagggagatgatgattgttatgagaacaacagagctggtgaacaaagat
ttggacatttattacaaggccctcgataaagccataatgacatttcatagcatgaagatg
caagaaatcaacaaaataatccgcgacctttggcgaagtacctacagaggacaagatatt
gaatatatagaaattcgttctgatgcagatgaaaacgtttcggcatctgataaaagaaga
agttacaattacagagtggtgatgataaagggagatacggcgctggatatgcgaggaagg
tgcagtgctgggcaaaaggtacttgcttctcttatcatccgtctcgctctggcagaaacg
ttctgcctcaactgtggcatattggcactggatgagcctaccaccaatcttgatcgagaa
aatatagaatctcttgcacacgcccttgtggagataataaaaagccgctcacgacaacgg
aactttcagctcctggtgataacccacgatgaagattttgtggaactcctcagccgttct
gaatatgtggaaaccttctacaggatcaagaagaacattgatcagtgctctgagatcatg
aagtgcagcgtcagctcccttggctcatatgttcattaa
DBGET
integrated database retrieval system
