Meleagris gallopavo (turkey): 100550138
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Entry
100550138 CDS
T01523
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04382
Cornified envelope formation
mgp04510
Focal adhesion
mgp04512
ECM-receptor interaction
mgp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100550138 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100550138 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100550138 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100550138 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mgp04147
]
100550138 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mgp00536
]
100550138 (COL4A1)
Exosome [BR:
mgp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100550138 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mgp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100550138 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100550138
NCBI-ProteinID:
XP_010726865
Ensembl:
ENSMGAG00000014861
UniProt:
A0A803YH11
LinkDB
All DBs
Position
1:complement(135025680..135137194)
Genome browser
AA seq
1670 aa
AA seq
DB search
MWRWLGFGLLLSAELSAVSAAGCSSSCGKCDCSGVKGQKGERGFPGIQGVIGFPGMQGPE
GPLGPPGLKGDTGEPGLPGTKGTRGPPGPSGFPGNPGIPGIPGQDGPPGPPGIPGCNGTK
GERGPVGPPGLPGLTGSIGPPGPPGIKGDPGEVIGLLPPSVLKGDKGFPGQPGLPGSPGT
PGFQGPMGPPGIPGEPGRPGPPGPPGEKGYMGLGFQGPKGEKGEQGIQGPPGPPGPTPHM
KEKGSEIIKGEKGEPGEKGEQGVPGLPGSGYRGEKGEPGKPGPRGKPGKDGEPGPKGEPG
LPGGFGVPGRPGEPGAKGEKGDQGPQGPPGRIIDAGPIDTFGEKGDPGVSGLPGLKGQKG
EKGFPGAQGIPGIPGRPVPDMVGSPGVPGQRGEKGEKGSPGFPIPGPPGRDGFPGPPGLP
GPPGPPGVTDGIDQCQQGQPGAPGIPGPPGQHGFPGEMGEKGEKGETCALCDKVGPPGLP
GPQGLPGPAGFPGQSGFKGDRGLPGLDGLPGVPGPPGAPGLIGRPGAKGEPGDFTYDSIL
KGEKGDPGFPGQPGIPGREGTPGKDGLPGPQGPKGASGTAGLKGERGPPGQPGFPGVRGE
RGLPGPPGIGTAGLPGDKGDRGFAGTPGLPGLPGAKGEAGRTVPLPGPPGADGLPGPPGF
PGPQGDKGNPGLPGRPGLPGEKGAVGQPGIGFPGPPGPKGFPGQPGSPGLPGTPGTPGLD
GFPGTPGLQGQKGEPGVGLPGPKGLPGIPGPAGIPGEKGNPGLPGLRGEQGFPGVPGQQG
FRGDPGLPGLQGLPGPQGSPGVGPPGLPGPAGQPGPEGPPGFPGIKGERGFPGIPGLDRP
GPKGDKGSQGQPGVPGSVGLPGLPGPQGSVGLKGSAGAKGEMGVMGTPGLPGTPGPIGDR
GLPGEKGSQGLKGVVGPQGDPGVKGDKGEAGLPGEPGSMDTMDMVSLKGQKGDPGEKGDL
GLPGEKGLRGEYGEPGIPGRDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGSVGEMGLP
GTPGEKGLPGIPGSPGTPGFPGQKGEKGDKGAAGFPGIGFPGSPGEKGEPGRIGSPGLSG
DKGEKGNAGIPGMPGSPGPKGSPGMAGFPGSPGLHGAKGEKGLPGLSGIPGLKGEPGEPG
VPGPAGSIGQKGEPGYDGIPGTAGAKGEQGAPGKGFPGFPGAKGDKGAKGEVGFPGSPGI
PGIPGLKGEQGYAGPPGPKGNQGLPGLPGSAIEGPKGDRGPQGQPGLPGLPGPMGPPGPP
GLKGAKGEQGSDGWPGTPGGPGDKGDPGFQGLPGSPGLPGGAGEKGDLGPPGVPGVPGPK
GSAGFPGLKGERGDQGLPGSKGLQGPPGPPGAFQLIKGDPGLPGPVGPVGLKGFPGLPGP
KGQQGVTGPSGVPGPPGSPGFDGRPGQKGEVGPYGPPGPRGIPGPPGPEGLPGAMGPPGA
ASVAHGFLVTRHSQTTEEPQCPFGTRLIYHGYSLLYVQGNERAHGQDLGTAGSCLRKFST
MPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPLTGESIRPFISRCAVCEAPAMVIA
VHSQTIQIPPCPEGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGR
GTCNYYANAYSFWLATIERNEMFKKPTPSTLKAGDLRSNVSRCQVCMRNT
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgttggctgggcttcgggctgctgctgagcgccgagctcagcgccgtgtctgcc
gcgggttgttcttctagttgtggaaaatgtgactgcagtggagtaaaaggacaaaaggga
gaaagaggctttccgggaatacagggtgtgattgggtttcctggaatgcaaggacctgaa
ggtccccttgggccaccagggcttaagggtgatactggagaaccaggactgccaggaaca
aaaggaacaaggggcccaccaggaccatcaggatttccaggaaacccaggcatccctggc
attcctggacaagatggccctcctggtccacctgggattccaggatgtaatggcacaaag
ggtgaaagaggtccagtaggtcccccaggtttaccaggactgactgggagcataggaccc
ccaggacctcctggaataaagggagatccaggtgaagtgattggtcttttacctcctagt
gtgctaaaaggtgataaaggctttcctggccaacctggactacctggttcacctggaact
ccagggtttcagggaccaatggggccaccagggattccaggagaaccaggtcgccctggg
ccaccaggaccaccaggtgagaagggctacatgggcttgggctttcaaggtcccaaaggt
gaaaagggagaacaagggatccagggtcccccagggccaccaggaccaacaccacacatg
aaagaaaaaggaagcgaaatcataaagggagaaaagggtgagccaggtgaaaagggtgag
cagggagtcccaggattgccaggctcaggttacagaggagaaaagggtgaacctgggaag
cctggtccacgtggaaagcctggaaaagatggtgaaccaggaccaaaaggagaacccggc
ttgcctggagggtttggggttccaggacggcctggggaacctggtgctaagggtgaaaaa
ggtgatcaaggtcctcaagggcctccaggaagaattatagatgctggaccaatagatact
tttggtgaaaaaggagaccctggcgtttctggtttgccaggactaaaaggtcaaaaaggt
gaaaaaggtttccctggtgcacaagggatcccaggaattccaggtcgaccagttccagac
atggtaggatcacctggtgtccctggccagagaggtgaaaagggtgaaaagggttctccg
ggattccctatacctggacctcctggcagagatggtttcccaggcccgcccgggttgccc
ggcccaccaggtcctccaggtgtaacagatggaattgatcaatgtcagcaggggcaacct
ggtgcaccgggtatacctggacctccagggcaacacggatttccaggagagatgggagag
aaaggtgaaaaaggtgaaacctgtgccttgtgtgataaagtaggacctcctggacttcca
ggacctcaaggactaccaggtccagcaggttttccgggacagtcaggtttcaagggtgac
agaggcttacctggacttgatggccttccaggcgtacccgggcctccaggcgctccagga
ctcattggccgccctggggcaaaaggagaaccaggagattttacgtatgattccatcctg
aaaggtgagaagggagatcctggtttcccaggacaaccaggtattcctggaagagaagga
acaccaggaaaagatggattgccagggcctcaaggtccaaaaggagcatcgggtacagct
ggcttgaaaggagaacgtggtccccctggccaacctggattccctggagtacgtggcgaa
agaggtttacctggccctcctgggataggcactgcagggttacctggtgacaaaggagac
agaggttttgctggaaccccaggtttacctggtcttccaggagcaaagggtgaagcagga
cgaactgtaccactccctggacctcctggggcagatggccttcctggaccacctggtttc
cctggaccccaaggtgacaaagggaatcctgggcttccagggagacctggcctgccagga
gaaaaaggtgctgttgggcagccaggtatagggtttcctggacctccaggacccaaaggt
ttcccaggtcagcctggctcacctggtctgccgggaactcctggaacccctggcctggat
ggttttccaggcacaccaggtttacaaggtcaaaaaggtgaacctggagtgggtctccct
ggtcccaaaggattgccaggcatcccaggcccagctggcatcccaggagaaaaaggaaat
ccagggctgcctggcttacgaggtgaacaaggattcccaggtgtacctggacaacaagga
ttcagaggagatccaggcctccctggactacaaggcttgccaggcccccaaggctcacca
ggagtgggcccaccaggattgccagggcctgctgggcagccaggacccgaagggccacca
ggatttcccggaataaaaggagaaagaggcttccctggtatcccaggtctagataggcca
gggccaaaaggcgataaaggtagccagggccagcctggagtaccagggtctgtagggcta
cctggcttgccaggtccacaaggatctgttggactgaaaggatcagcaggagccaaagga
gaaatgggagttatgggaactcccgggttgccagggactcctggaccaattggagatcga
gggttgcctggtgaaaaaggtagccaaggtttgaaaggtgtggttggaccacagggtgat
ccaggtgtcaaaggggataaaggtgaagctggtcttccgggagaacctggaagcatggac
accatggatatggttagtctcaaaggccaaaaaggagatcctggagaaaaaggagacctt
gggctaccaggagaaaaagggttacgtggggagtatggagaaccaggaattccaggaagg
gatggtgaacctggtactccgggacaaccaggaccaaaaggagatcagggtcccccaggg
tacccaggagatccaggaattccaggacaaaaaggatcagttggtgaaatgggtttgcca
ggaacacctggagaaaagggtctgcctggaataccaggttcaccaggcacaccagggttc
cctgggcaaaaaggtgaaaaaggagacaaaggagcagcaggttttcctggaattggattt
ccaggatctcctggtgagaagggagaaccaggaagaataggtagtccaggtttatctgga
gacaaaggtgaaaagggtaatgcaggaattccaggaatgccgggttctccaggtcccaaa
ggatcccctggcatggcaggatttccagggagcccaggcctccatggagcaaagggtgaa
aaaggacttcctggcttaagtggcatcccaggtttaaaaggagaaccaggtgaacctggt
gttcctggtcctgctggttccattggtcagaagggtgaaccaggctatgatgggattcca
ggcacagctggtgcaaagggtgaacaaggtgctccaggtaaaggatttccaggatttcca
ggtgcaaagggagataaaggtgcgaaaggtgaagtgggtttcccaggatccccaggaatc
ccagggattccaggcttaaaaggagaacaagggtatgctggcccaccaggccctaaaggc
aaccaaggtcttcctggactaccaggaagtgcaattgagggccctaaaggagacagagga
ccccaaggccaacctggcctaccaggtttaccaggtccaatggggccaccaggacctcca
ggtctgaaaggggctaaaggagagcaggggagtgatggctggcctggaactcctggaggt
ccaggagataaaggtgatccaggtttccagggactgccaggtagtcctggtttgccagga
ggtgctggtgaaaaaggtgatctagggcctccaggtgttccaggtgttccaggtccaaaa
ggatctgcaggcttcccaggcctcaagggtgaacgaggtgaccaaggtcttcctggatct
aaaggtttacaaggcccaccgggccccccaggtgcttttcagcttatcaaaggggatcct
ggcttacctggtccagtaggaccagttggtctcaaaggatttccaggacttccaggtccc
aaaggacagcaaggagtaacaggaccttcaggtgtacctggaccacctggtagtccaggg
tttgatggcagacccgggcaaaaaggagaagttggtccttatggtcccccagggcccaga
ggaatccctggtccacctggccctgaaggtttacctggtgctatgggcccaccaggtgca
gcatctgttgctcatggcttccttgttaccagacacagtcaaaccactgaagaaccacaa
tgtccttttggaacaaggctgatttaccatggctactccctgctttatgtacaaggaaat
gaaagagcacatggccaagatctgggcaccgcagggagctgtcttcgtaaatttagtact
atgcctttcttattctgcaatatcaacaatgtatgtaactttgcgtcgaggaatgactat
tcctactggctgtccactcctgagcccatgccaatgagtatggcacctctcactggtgaa
agtatcagaccattcatcagcagatgcgctgtgtgtgaagctcctgctatggtaattgct
gttcatagtcaaacaatccagataccaccatgtcctgaaggctggagttccctttggatt
ggttactcctttgtcatgcataccagtgctggtgctgagggctctggccaggccctggcg
tctcctggttcctgcctggaggagttccgcagcgctcccttcattgaatgccatggccgg
ggcacctgcaattattatgcaaatgcttacagcttctggcttgccactatagagaggaat
gagatgttcaagaaaccgactccgtcaactttgaaagcaggggatctgcgctcaaacgtt
agccgttgtcaagtctgtatgagaaatacataa
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integrated database retrieval system
