Meleagris gallopavo (turkey): 100550346
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Entry
100550346 CDS
T01523
Symbol
ATRX
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100550346 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mgp03000
]
100550346 (ATRX)
03036 Chromosome and associated proteins [BR:
mgp03036
]
100550346 (ATRX)
Transcription factors [BR:
mgp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100550346 (ATRX)
Chromosome and associated proteins [BR:
mgp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100550346 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100550346
NCBI-ProteinID:
XP_031410592
Ensembl:
ENSMGAG00000006058
LinkDB
All DBs
Position
9:complement(12682590..12750779)
Genome browser
AA seq
2478 aa
AA seq
DB search
MTALGLTQGTSSQEKAPVQEIVDTIGGKNEREIRDITCKGIECVRIMKEYVFIAEAWGKT
LAFLLESKLNTLVQKLHDFLAHSSEESEDTNSPPALSKTKSLGKSREPERSPISMENNRE
EGGSSSERVTFLGSSRSKRKPTVVTKYVGSDEEQILDETVNEDNSNENSENDVDMKSLPK
GTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEVPKKRGEEGLHGIVSCTACGQQVNHF
QKDSIYRHPTLKVLICKTCYRYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTILDENNQWHCYSCHPEPLLDLVTACDSVFENLEQLLQQNXKKTKVE
SEKSKIYDSTVKFSPKRNNSNCNGEXKKLDDSYSGSLTYSYKALMVPKDMLKKTKKLVET
TANMNSSFVSFLKKAAENSEVSPAVQLRQLKAFRSVLGDIKKAHVALEEGLNLEIQALDV
KIKEKNTKEKKLDVRSEKNEVKKDEGKEHAALKGDDTVKKQKKVVSEQPDNEPMDQDVST
VEKKDSKRTSGEDKRSGTNEEPQYEPNSTEALDMDIVSVPSSVPEDIFETLESAMEIQTA
ADEQGNGNSGTDHENPNIKLTTPLKDTKGSKLKTSAKGTKELIVKLTPVSLSESPFKSED
QDSSLEKGSKDERTEKCDSVKQNSNADSERSTENETVSLAEESDLRRSPRVKTTPLRRQA
DVNPLTSNSEEDSNDTSNEKRKRRSSKQSRRKKDKRNSSDSAADGPRPNKLSKSKKPAIV
DNSSDSDEMPAVLKEVAMMSRSSSDIDSNSELPAKDQKTSGVLKDQPAMDENGKRKRKSS
SSGSDLDAKRGKSAKNSATAKKKRQNYSDSSNYDSELEKEIKHLSKIESAKKAKKKYSRK
EDSYDSSEEEQRKKVSKRKVNLKKQRGKSSEDDAAEKSSPEKEINHSSEDKQVCVGSIAK
EKLKKNXKKEALKGKLDESSDAEKPLLEKEESSPKSVKLTEAKKNKDFKKKKAQEDSSSE
STEKYAKKEHSFDSSKEKFKNKKSSENKEKKSENLKQKIFKKEDDSSSDVEKSSPEKGSC
NSSENDKTKNETMVKERKRRNLREKVPKRVQIDLSSDADKSPLKEESSSEDAVRSKKRPE
AKEKKKISQKKKIIKKEQNDSSSSDEESYEDNKKKIKKGSVKENKRSNLTEKKKMSKKVI
VSSSSSSDKEENDEQNSTGDGSSDEQKIMPVTENLMLSAGTGFCQSSGDEGETKSRTVPM
EEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDEESDEGKKKTGKQTENIGDDEEN
EKEDNSESNSEEEDSKKPRYRHRLLRHRLTVSDGESGEEKKGKPKETKEGKRRNRRKVSS
DDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEENQRSYKQKKKRRRIKVPDDSSS
ENNNKSNSEDEENDDSKSPGKGRKKIRKIIKDDKLRTETQNALKEEEERRKRIAERERER
EKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQVHRSIVTRLKPHQVDGVQFMWDC
CCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLNFRTALVVCPLNTALNW
LNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQRWQDEGGVMIIGYEMYRNLAQGRN
VKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNN
LIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTLVDVRVMKKRAHILYEMLAGC
VQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLDHLTGVGGGSEGGRGKAGAKLFQ
DFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIASDSDETSMSLSSDDYAKKKKSK
GKKGKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAEELGNNPSSVIKSEEGKATSSSN
PGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEELGDKVLVFSQSLISLDLIEDF
LELANREKTDKEKPPIYKGEGKWFRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFI
ISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQSKPVFVYRFLAQGTMEDK
IYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKD
TILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNMPTG
TNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAARIQPLEDII
STIWKENVTLTESQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRL
QQQYNQQQQQHMSYQQTAMSHLMMPKPPNLIMNPSNYQQIDMRGMYQSVSGGMQPPPLQR
APPPMRGKNAGPSQGKSM
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccttggtcttactcagggtacctccagccaggaaaaggcacctgtccaggaa
attgtggatactataggtggaaaaaatgagcgtgagatacgtgacataacatgcaaggga
atcgaatgtgtacgaatcatgaaggagtatgtctttatagcagaagcatggggcaaaact
cttgcctttttacttgaaagcaagttgaatacattggtgcagaaactccatgacttcttg
gctcactcatcagaggaatctgaggacacaaactcacctccagcactatctaaaaccaaa
agcctaggtaaaagtagggaacctgaaagaagtccaatctcaatggagaacaacagagaa
gagggtggtagttcttcagaaagagtcactttcttaggatcgtcacgctcaaaaaggaaa
cctacagttgtaacaaagtatgttggatcagatgaggaacaaatcttagatgagactgta
aatgaagataattcaaatgaaaactcagaaaatgatgttgatatgaaaagcttgcctaaa
ggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgattttaaaggg
cctgaatttagaagcagaaataccgttaaaatgaaacctgaagtccccaaaaagcgtgga
gaggaaggactgcatggaattgtaagctgtacagcttgtgggcaacaggtgaaccatttt
caaaaggattcaatctatagacatcctacattgaaagttcttatttgtaagacatgctac
aggtattacatgagcgatgacattagtcgtgattcagatggaatggatgaacagtgtagg
tggtgtgctgaaggtggaaatctgatttgctgtgacttttgccataacgccttctgtaaa
aagtgcattttgcgcaacttgggtagaaaggagctatcaaccatactggatgaaaataac
cagtggcattgctatagctgtcatccagagcctctgttggacttggtcactgcgtgtgac
agcgtttttgaaaatttagaacagttactgcaacaaaacnaaaaaaagaccaaagttgaa
agtgaaaaaagtaaaatatacgacagtacagtcaaattttctccaaagagaaataattca
aactgtaatggtgaangaaaaaaactagatgattcgtattcaggttcactaacatattct
tataaagcactaatggtgccaaaagacatgcttaagaaaacaaaaaaactggttgagact
acagcaaatatgaattccagctttgtgagctttttgaaaaaggctgcagaaaattcagaa
gtaagcccagccgtgcaacttcgtcagctaaaagcttttagatctgtcctgggtgacatc
aaaaaagctcatgtggcactagaagaaggtctgaacctggagattcaagctttggatgtt
aaaatcaaagagaaaaataccaaagagaaaaaactagatgttagatcagaaaaaaatgag
gtgaagaaagatgaaggaaaggaacatgcagcattaaaaggggatgacactgtaaagaag
cagaaaaaagttgtatcagaacagcctgacaatgagccaatggatcaagatgtttcgaca
gtagaaaaaaaagacagcaaacgtacaagtggtgaagataaaaggtctggcacaaatgag
gaacctcagtatgagcctaatagtacagaggctttagacatggatatagtgtctgttccc
tcatctgttcctgaagatatttttgagactctagaatctgctatggaaattcagactgca
gcggatgagcaagggaatggaaatagcggaacagatcacgagaatccaaatataaaattg
accactcctttgaaagataccaaaggatctaaactgaaaacatcagctaaaggaaccaag
gaattgattgtgaaattgactcctgtatccctttcagagtctccatttaaatctgaagat
caagacagcagtctggaaaagggaagcaaggatgaaagaacagaaaaatgtgattctgta
aagcaaaatagtaatgctgatagcgaacgttccacagagaatgaaacagtctcacttgca
gaggaatctgatctcaggagatcaccccgtgtgaagaccacacctctgaggcgccaagca
gacgttaatcctttaacatcaaattcagaagaagatagcaatgacacaagtaatgaaaaa
cgtaagagaagatcatcaaaacaatcaagaaggaaaaaagataaaagaaactcttctgac
agcgcagctgatggtcctaggcctaataaacttagtaaatcaaaaaagccagctatagta
gataatagttctgattctgatgagatgccagctgttcttaaagaagtagctatgatgagt
cgcagttcttcagatattgacagcaatagcgaattaccagcgaaagatcagaagacttca
ggtgttctaaaggatcaaccagcaatggatgaaaatggaaagcggaaaaggaaaagttcc
agttctgggtcagatttagatgccaaaagaggcaaatcagctaaaaattctgctacggca
aaaaagaaacggcagaactattcagattcttcgaactatgattctgagttagaaaaagaa
attaaacatttgagtaaaattgagtctgcaaaaaaagctaagaaaaaatactcacgaaaa
gaagatagttacgattcttctgaagaagagcagaggaagaaagttagtaagagaaaggta
aatctgaagaaacaaagaggtaaatcttctgaagatgatgctgctgaaaagtcatctcca
gagaaggagattaatcattcatctgaagataaacaagtttgcgtagggtcaattgctaag
gaaaaactaaagaaaaacnttaaaaaagaagctttgaagggtaagcttgatgagtcttct
gatgctgagaagcctttactggagaaagaagagagtagtcctaaaagtgttaagctaact
gaagctaagaaaaacaaggattttaagaagaaaaaggcacaagaagattcttcttcagag
agtactgagaagtatgcaaagaaggaacacagttttgattcttcaaaggagaaattcaaa
aataaaaaaagttcagaaaacaaagagaagaaatcagaaaatttgaaacagaaaatcttc
aagaaagaagatgattcctcttctgatgttgaaaagtcatctccagagaaaggaagttgt
aattcttctgaaaatgacaagactaaaaatgaaacaatggttaaagaaaggaaaaggagg
aatttaagagagaaagtacctaaaagagtacagattgatttatcttctgatgctgacaaa
tctcccctgaaagaggagagttcttctgaagatgctgtgcgaagtaaaaaacgacctgaa
gcgaaggaaaagaaaaaaataagtcagaaaaagaaaattatcaagaaagagcagaatgat
tcgtcctcttctgatgaggagtcttatgaagacaataagaaaaagattaaaaaaggatcc
gtgaaagaaaataaaaggagtaacttaacagagaaaaagaaaatgtcaaaaaaggttatt
gtctcttcctcctcctcatctgataaggaagaaaatgatgagcagaattccacaggtgat
ggaagcagtgatgagcagaaaattatgccagtgactgaaaatttaatgctgtctgctggt
acaggattttgtcagtcatcaggagatgagggagagactaaatcaagaactgttccaatg
gaggaggaggaagatgatgatgatgacgatcctgagaatagaattgccaagaaaatgctt
ttagaagaaatcaaagccaatctttcctctgatgaggatgcatcttctgatgaagaatcg
gatgaaggaaaaaagaaaactggaaagcaaactgaaaacataggagatgatgaagagaat
gaaaaagaagataattctgaatcgaattcagaggaagaggactcaaagaagcccagatac
agacacagactgctgaggcacagactgacagtgagtgacggagaatctggtgaagaaaag
aaggggaaacctaaagaaacaaaagaaggaaagcgcagaaatagaaggaaagtgagcagc
gatgattcaaatgactcagagttccatgaatctgcagttagtgaagaagtcagtgagtct
gaagatgaccaacgtccaagaacaaggtctgccaagaaagctgaggcagaagaaaatcag
cgcagttacaaacagaaaaagaaacgaagacgtataaaagttccagatgattcttcaagt
gaaaacaacaataagagtaattctgaagatgaggaaaacgatgattcaaaatctcctgga
aaaggcagaaagaaaattaggaagattattaaagatgataagcttagaacagagacacaa
aatgcacttaaagaggaagaagaaagaagaaaacgtatagcagaaagagaacgggagaga
gagaagttgagagaggtgatagagatagaagatgcttcacctttgaaatgtcccattaca
actaagctggttttagatgaagatgaagaaacaaaagaaccattagtgcaggttcacagg
agtatagttaccagactgaaaccacaccaagtagatggtgttcagttcatgtgggattgc
tgttgtgaatctgttaaaaagacaaagacatctcctggttctggatgcattcttgctcac
tgtatgggtctggggaagacattacaggtagtgagctttctgcacacagtcttgctatgt
gacaagctgaatttccggacggctcttgtagtgtgtcccctgaacactgccttgaactgg
ttgaatgagtttgaaaaatggcaggaaggtttagaagacgatgagaaattagaggtctgt
gaattagcaactgtgaaacgccctcaagagagaagctatatgctgcagcgttggcaagat
gaaggaggtgtgatgataataggctatgagatgtatcgtaatcttgcacaaggcaggaat
gtgaagagtagaaaactgaaagaaatatttaataaagctttagtagatccaggccctgac
tttgttgtttgtgacgaagggcacatattaaaaaatgaagcatctgctgtttctaaggca
atgaattcaattcgttctaggagaagaataattctgacaggaacaccactgcaaaataat
cttatagaatatcactgcatggttaactttattaaggagaatttacttggttcaattaaa
gaattccgaaatcgatttataaatccaattcagaacggtcagtgtgcagactccactctg
gtggatgtcagagtaatgaagaagcgggcacatattctctatgagatgttagctggatgc
gttcagaggaaagattacactgcattaacaaagttcctcccaccaaaatatgagtatgtt
ctagaagttagaatgacacctattcagtgcaagctctaccagtattacttggatcatttg
acaggtgtaggtggcggcagcgaaggtggacgaggcaaagctggagctaaactgttccag
gatttccagatgttgagcagaatctggactcatccctggtgtttgcagctggactatatt
agcaaagaaaataagggctactttgatgaagacagtatggatgacttcatagcttcagat
tccgatgaaacttcaatgagtttaagttctgatgattatgcaaagaaaaaaaaatccaag
gggaaaaaaggaaagaaagaatgtagttcaagtgggagtggcagcgataacgatgttgaa
gtcattaaagtctggaattcaagatctcgtggaggtggagaaggaaatgcagaagaactt
ggaaacaacccttcatcagttataaaatcagaagaaggtaaagctacttcctcatccaat
cctggtagcccagctccagactggtacaaagattttgtcactgatgcagatgctgaggtg
ttggaacattctgggaaaatggttcttctctttgaaatccttcgaatggcagaggagctt
ggggacaaagtcctagtgtttagccagtcccttatatcgttggatttgatagaagatttt
ctggagctggctaacagagagaaaactgacaaagagaagcctcctatctataaaggtgaa
ggaaaatggttccgaaacattgattactatcgcttagatggttcaactacagctcagtca
agaaagaaatgggctgaagaatttaatgatgaaactaatgtgagaggccgcttgtttatt
atatccactaaggcaggttcccttggaattaatctcgtggctgctaatagagtaatcatc
tttgatgcttcttggaacccatcatatgatatccagagtattttcagggtttaccgcttt
gggcagagcaaacctgtgtttgtgtacagatttttggcccagggtacaatggaagataaa
atctacgaccggcaggtaacaaagcagtccctgtctttccgggttgttgaccagcagcaa
gttgaacgtcattttactatgaatgagctaacagagctgtacacttttgagccggatttg
ctggatgatccgaattcagaaaagaaaaagaagagagacacaccaatgttgccaaaagat
acaatcctggcagaattgcttcaaatcaataaggagtatatagtagggtatcacgagcat
gattcactcctggaccataaggaggaagaggagctcaccgaagaggaaaggaaggcggcc
tgggcagaatatgaggcagaaaagaagggcttgaccatgcgtttcaacatgccaacaggg
accaacatgcttcccactaatttcaactctcaaaccccgtatattcctttcaatttgggt
gctctgtcagcgatgagcaatcaacagctggaggacctcattaatcaaggaagagagaag
gttgtggaagcaaccaacagtgtaactgcagcaagaattcagccccttgaagacatcatt
tcaactatatggaaagagaatgtaacgcttacagagagccaagtgcaggccctggccctg
agtagacaggcaagccaagagcttgatgttaagcgacgagaagccatctataacgacgtc
cttactaaacaacagatgttgatcagttgtgttcagaggatactcatgaacagaagacta
cagcagcagtacaatcagcagcagcaacagcacatgtcttaccagcaaacagcaatgagt
catctcatgatgccaaagcctccaaatttaatcatgaatccttccaactaccaacagata
gatatgagaggaatgtatcagtcagtatctggtggtatgcagccgccgcctttacagcga
gcaccacccccaatgagaggcaaaaatgcagggccttcccaagggaaatcgatgtga
DBGET
integrated database retrieval system
