Meleagris gallopavo (turkey): 100550547
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Entry
100550547 CDS
T01523
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5 isoform X1
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
mgp
Meleagris gallopavo (turkey)
Pathway
mgp03018
RNA degradation
mgp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mgp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100550547 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
100550547 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgp03019
]
100550547 (LSM5)
03041 Spliceosome [BR:
mgp03041
]
100550547 (LSM5)
Messenger RNA biogenesis [BR:
mgp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100550547 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
100550547 (LSM5)
Spliceosome [BR:
mgp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100550547 (LSM5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
100550547
NCBI-ProteinID:
XP_003207351
Ensembl:
ENSMGAG00000012117
LinkDB
All DBs
Position
6:46683490..46687323
Genome browser
AA seq
91 aa
AA seq
DB search
MAANASTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaacgcgagcaccaacccatcgcagctcctgccgctcgagcttgtggataaa
tgtataggttctcgcatccatatcgtgatgaagagcgataaggaaattgtcgggacgctg
ctgggatttgatgactttgtcaatatggtgttagaagacgttacagaatttgagatcacg
cctgaaggcagaagaatcacaaaactagaccagattttgctaaatggaaataacataaca
atgctggttcctggaggagaaggacctgaagtataa
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integrated database retrieval system
